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9JD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N40C39sing1.47Å1.46Å
C39C36sing1.53Å1.55Å
C01C02sing1.53Å1.48Å
C36O38sing1.43Å1.43Å
C36C35sing1.53Å1.52Å
C02C03sing1.51Å1.47Å
C04C03doub1.38Å1.38ÅAromatic
C04C05sing1.38Å1.38ÅAromatic
C35C33sing1.51Å1.52Å
C03C08sing1.38Å1.39ÅAromatic
O34C33doub1.21Å1.22Å
C05C06doub1.38Å1.38ÅAromatic
C33N31sing1.35Å1.35Å
C08C07doub1.39Å1.39ÅAromatic
C06C07sing1.39Å1.39ÅAromatic
N31C30sing1.47Å1.47Å
N31C32sing1.47Å1.46Å
N21C20sing1.46Å1.45Å
N21C22sing1.35Å1.34Å
C07C09sing1.48Å1.49Å
C20C19sing1.53Å1.51Å
O24C22sing1.35Å1.34Å
O24C25sing1.45Å1.45Å
C22O23doub1.21Å1.21Å
C30C29sing1.53Å1.52Å
C32C26sing1.53Å1.44Å
C18C19sing1.53Å1.53Å
C18C16sing1.53Å1.55Å
C26C16sing1.53Å1.61Å
C26C28sing1.53Å1.53Å
C29C28sing1.53Å1.53Å
F11C10sing1.35Å1.35Å
C09C10doub1.39Å1.39ÅAromatic
C09C15sing1.39Å1.42ÅAromatic
C16C15sing1.51Å1.55Å
C16O17sing1.43Å1.43Å
C10C12sing1.38Å1.37ÅAromatic
C15C14doub1.38Å1.39ÅAromatic
C12C13doub1.38Å1.38ÅAromatic
C14C13sing1.38Å1.39ÅAromatic
C12H1sing1.08Å1.08Å
C13H2sing1.08Å1.08Å
C14H3sing1.08Å1.08Å
C18H4sing1.09Å1.10Å
C18H5sing1.09Å1.10Å
C19H6sing1.09Å1.10Å
C19H7sing1.09Å1.10Å
N21H8sing0.97Å1.00Å
C01H9sing1.09Å1.10Å
C01H10sing1.09Å1.10Å
C01H11sing1.09Å1.10Å
C02H12sing1.09Å1.10Å
C02H13sing1.09Å1.10Å
C04H14sing1.08Å1.08Å
C05H15sing1.08Å1.08Å
C06H16sing1.08Å1.08Å
C08H17sing1.08Å1.08Å
O17H18sing0.97Å0.95Å
C20H19sing1.09Å1.10Å
C20H20sing1.09Å1.10Å
C25H21sing1.09Å1.10Å
C25H22sing1.09Å1.10Å
C25H23sing1.09Å1.10Å
C26H24sing1.09Å1.10Å
C28H25sing1.09Å1.10Å
C28H26sing1.09Å1.10Å
C29H27sing1.09Å1.10Å
C29H28sing1.09Å1.10Å
C30H29sing1.09Å1.10Å
C30H30sing1.09Å1.10Å
C32H31sing1.09Å1.10Å
C32H32sing1.09Å1.10Å
C35H33sing1.09Å1.10Å
C35H34sing1.09Å1.10Å
C36H35sing1.09Å1.10Å
O38H36sing0.97Å0.95Å
C39H37sing1.09Å1.10Å
C39H38sing1.09Å1.10Å
N40H39sing1.01Å1.00Å
N40H40sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N40C39C36114.7°109.5°
N40C39H37108.2°109.5°
N40C39H38108.2°109.5°
C39N40H39109.5°111.1°
C39N40H40109.4°111.0°
C39C36O38104.8°109.5°
C39C36C35110.6°109.5°
C39C36H35110.2°109.5°
C36C39H37108.1°109.5°
C36C39H38108.1°109.5°
C01C02C03112.2°109.5°
C02C01H9109.5°109.5°
C02C01H10109.5°109.5°
C02C01H11109.5°109.4°
C01C02H12108.8°109.5°
C01C02H13108.8°109.5°
O38C36C35108.6°109.5°
O38C36H35112.0°109.5°
C36O38H36109.5°114.0°
C36C35C33111.8°109.5°
C36C35H33108.9°109.5°
C36C35H34108.9°109.5°
C35C36H35110.6°109.4°
C02C03C04120.8°120.0°
C02C03C08120.6°119.9°
C03C02H12108.8°109.5°
C03C02H13108.8°109.5°
C03C04C05120.7°120.2°
C04C03C08118.5°120.1°
C03C04H14119.7°119.9°
C04C05C06120.3°120.1°
C05C04H14119.7°119.9°
C04C05H15119.9°119.9°
C35C33O34120.0°120.0°
C35C33N31118.7°120.0°
C33C35H33108.9°109.5°
C33C35H34108.9°109.5°
C03C08C07121.7°119.9°
C03C08H17119.2°120.1°
O34C33N31121.3°120.0°
C05C06C07120.4°119.9°
C06C05H15119.8°120.0°
C05C06H16119.8°120.0°
C33N31C30123.3°120.7°
C33N31C32125.7°120.6°
C08C07C06118.4°119.8°
C08C07C09120.7°120.1°
C07C08H17119.1°120.0°
C06C07C09120.9°120.1°
C07C06H16119.8°120.1°
C30N31C32111.0°118.7°
N31C30C29110.7°108.8°
N31C30H29109.1°109.6°
N31C30H30109.2°109.7°
N31C32C26111.1°108.8°
N31C32H31109.1°109.6°
N31C32H32109.1°109.6°
C20N21C22121.7°120.0°
N21C20C19112.3°109.4°
C20N21H8119.1°120.1°
N21C20H19108.8°109.5°
N21C20H20108.8°109.5°
N21C22O24111.0°120.0°
N21C22O23124.7°120.0°
C22N21H8119.1°120.0°
C07C09C10119.5°120.1°
C07C09C15122.7°120.1°
C20C19C18111.7°109.5°
C20C19H6108.9°109.5°
C20C19H7108.9°109.5°
C19C20H19108.7°109.5°
C19C20H20108.7°109.4°
C22O24C25115.6°117.0°
O24C22O23124.3°120.0°
O24C25H21109.5°109.5°
O24C25H22109.4°109.5°
O24C25H23109.5°109.5°
C30C29C28111.0°109.3°
C30C29H27109.1°109.5°
C30C29H28109.1°109.5°
C29C30H29109.2°109.6°
C29C30H30109.2°109.6°
C32C26C16109.2°109.5°
C32C26C28107.6°109.3°
C32C26H24109.3°109.5°
C26C32H31109.1°109.6°
C26C32H32109.1°109.6°
C19C18C16116.3°109.5°
C19C18H4107.7°109.5°
C19C18H5107.8°109.4°
C18C19H6108.9°109.4°
C18C19H7108.9°109.4°
C18C16C26116.8°109.5°
C18C16C15113.6°109.4°
C18C16O17107.4°109.4°
C16C18H4107.7°109.5°
C16C18H5107.7°109.5°
C16C26C28115.4°109.5°
C26C16C15112.9°109.5°
C26C16O1795.9°109.5°
C16C26H24107.3°109.5°
C26C28C29112.0°109.6°
C28C26H24108.1°109.5°
C26C28H25108.9°109.4°
C26C28H26108.9°109.5°
C29C28H25108.8°109.5°
C29C28H26108.8°109.5°
C28C29H27109.1°109.5°
C28C29H28109.1°109.5°
F11C10C09117.7°120.1°
F11C10C12118.5°120.1°
C10C09C15117.8°119.8°
C09C10C12123.8°119.8°
C09C15C16121.6°120.1°
C09C15C14118.7°119.9°
C15C16O17108.2°109.5°
C16C15C14119.7°120.1°
C16O17H18109.5°114.0°
C10C12C13118.1°120.1°
C10C12H1121.0°119.9°
C15C14C13121.1°120.2°
C15C14H3119.4°119.9°
C12C13C14120.6°120.3°
C13C12H1121.0°120.0°
C12C13H2119.7°119.9°
C14C13H2119.7°119.8°
C13C14H3119.4°120.0°
H4C18H5109.4°109.5°
H6C19H7109.4°109.4°
H9C01H10109.5°109.5°
H9C01H11109.5°109.4°
H10C01H11109.5°109.5°
H12C02H13109.5°109.4°
H19C20H20109.5°109.5°
H21C25H22109.5°109.4°
H21C25H23109.5°109.4°
H22C25H23109.5°109.5°
H25C28H26109.5°109.5°
H27C29H28109.5°109.5°
H29C30H30109.5°109.6°
H31C32H32109.5°109.6°
H33C35H34109.4°109.4°
H37C39H38109.5°109.5°
H39N40H40109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N40C39C36H37120.8°120.0°
N40C39C36H38120.8°120.0°
N40C39C36O38133.8°65.0°
N40C39C36C35109.4°175.0°
N40C39C36H3513.2°55.0°
N40C39H37H38117.7°120.0°
C39N40H39H40120.0°124.0°
C39C36O38C35118.2°120.0°
C39C36O38H35119.4°120.0°
C39C36C35H35122.4°120.0°
C39C36C35C33165.2°175.0°
C39C36C35H3374.4°55.0°
C39C36C35H3444.8°65.0°
C39C36O38H36180.0°60.0°
C36C39H37H38117.6°120.0°
C36C39N40H39180.0°56.0°
C36C39N40H4060.0°180.0°
C01C02C03H12120.4°120.0°
C01C02C03H13120.4°120.0°
C01C02C03C0489.5°89.7°
C01C02C03C0889.9°90.0°
C02C01H9H10120.0°120.1°
C02C01H9H11120.0°119.9°
C02C01H10H11120.0°120.0°
C01C02H12H13118.8°120.0°
O38C36C35H35123.2°120.0°
O38C36C35C3380.4°65.0°
O38C36C35H3340.0°175.0°
O38C36C35H34159.3°55.0°
O38C36C39H3713.0°175.0°
O38C36C39H38105.5°55.0°
C36C35C33H33120.4°120.0°
C36C35C33H34120.4°120.0°
C36C35C33O3421.2°0.0°
C36C35C33N31158.9°180.0°
C36C35H33H34118.9°120.0°
C35C36O38H3661.8°60.0°
C35C36C39H37129.8°55.0°
C35C36C39H3811.3°65.0°
C02C03C04C08179.4°179.7°
C02C03C04C05180.0°180.0°
C02C03C08C07179.9°179.7°
C03C02C01H9180.0°179.9°
C03C02C01H1060.0°60.0°
C03C02C01H1160.0°60.0°
C03C02H12H13118.7°120.0°
C02C03C04H140.0°0.1°
C02C03C08H170.1°0.0°
C03C04C05H14180.0°179.9°
C03C04C05C060.1°0.0°
C04C03C08C070.5°0.5°
C04C03C02H1231.0°150.2°
C04C03C02H13150.2°30.3°
C03C04C05H15179.8°180.0°
C04C03C08H17179.5°179.7°
C05C04C03C080.6°0.3°
C04C05C06H15180.0°180.0°
C04C05C06C070.4°0.0°
C04C05C06H16179.6°180.0°
C35C33O34N31180.0°180.0°
C35C33N31C30179.5°0.0°
C35C33N31C320.2°180.0°
C33C35H33H34118.9°120.0°
C33C35C36H3542.8°55.0°
C03C08C07H17180.0°179.7°
C03C08C07C060.0°0.5°
C03C08C07C09179.0°179.7°
C08C03C02H12149.7°30.0°
C08C03C02H1330.4°150.0°
C08C03C04H14179.4°179.8°
O34C33N31C300.5°180.0°
O34C33N31C32179.8°0.0°
O34C33C35H33141.5°120.0°
O34C33C35H3499.2°120.1°
C05C06C07C080.5°0.3°
C05C06C07H16180.0°180.0°
C05C06C07C09179.5°180.0°
C06C05C04H14179.9°179.9°
C33N31C30C32179.4°180.0°
C33N31C30C29122.3°126.4°
C33N31C32C26113.9°126.4°
C33N31C30H292.1°113.8°
C33N31C30H30117.5°6.6°
C33N31C32H31125.8°6.6°
C33N31C32H326.3°113.7°
N31C33C35H3338.5°60.0°
N31C33C35H3480.7°59.9°
C08C07C06C09179.0°179.7°
C08C07C09C10116.0°78.9°
C08C07C09C1564.9°101.1°
C08C07C06H16179.5°179.7°
C06C07C09C1065.1°100.8°
C06C07C09C15114.1°79.2°
C07C06C05H15179.6°180.0°
C06C07C08H17180.0°179.7°
N31C30C29H29120.2°119.8°
N31C30C29H30120.2°119.9°
C30N31C32C2665.5°53.6°
N31C30C29C2850.1°54.7°
N31C30C29H2770.2°174.6°
N31C30C29H28170.3°65.3°
N31C30H29H30119.4°120.4°
C30N31C32H3154.8°173.5°
C30N31C32H32174.3°66.2°
C32N31C30C2957.1°53.6°
N31C32C26H31120.3°119.8°
N31C32C26H32120.2°119.8°
N31C32C26C16171.5°174.6°
N31C32C26C2862.7°54.6°
N31C32C26H2454.5°65.3°
C32N31C30H29177.3°66.2°
C32N31C30H3063.1°173.5°
N31C32H31H32119.3°120.3°
C20N21C22H8180.0°180.0°
N21C20C19H19120.4°120.0°
N21C20C19H20120.4°120.0°
C20N21C22O24166.5°180.0°
C20N21C22O2313.6°0.0°
N21C20C19C1846.9°180.0°
N21C20C19H673.4°60.0°
N21C20C19H7167.2°60.0°
N21C20H19H20118.8°120.1°
C22N21C20C19107.3°180.0°
N21C22O24O23179.9°180.0°
N21C22O24C25178.1°180.0°
C22N21C20H1913.1°60.0°
C22N21C20H20132.3°60.1°
C07C09C10F110.4°0.3°
C07C09C10C15179.2°180.0°
C07C09C15C161.4°0.0°
C07C09C10C12179.7°179.9°
C07C09C15C14179.9°180.0°
C09C07C06H160.5°0.0°
C09C07C08H171.0°0.0°
C20C19C18H6120.3°120.1°
C20C19C18H7120.4°120.0°
C20C19C18C16165.4°180.0°
C20C19C18H444.4°60.0°
C20C19C18H573.6°60.0°
C20C19H6H7119.0°120.0°
C19C20N21H872.7°0.0°
C19C20H19H20118.7°120.0°
O24C22N21H813.5°0.0°
C22O24C25H21180.0°60.0°
C22O24C25H2260.0°180.0°
C22O24C25H2360.0°60.0°
C25O24C22O231.8°0.0°
O24C25H21H22120.0°120.0°
O24C25H21H23120.0°120.0°
O24C25H22H23120.0°120.0°
O23C22N21H8166.5°180.0°
C30C29C28C2650.1°61.4°
C30C29C28H27120.2°120.0°
C30C29C28H28120.2°120.0°
C30C29C28H2570.3°58.6°
C30C29C28H26170.5°178.6°
C30C29H27H28119.3°120.1°
C29C30H29H30119.4°120.3°
C32C26C16C1845.8°178.9°
C32C26C16C28121.2°119.8°
C32C26C16H24118.3°120.1°
C32C26C28H24117.9°119.9°
C32C26C28C2955.7°61.3°
C32C26C16C15179.8°58.9°
C32C26C16O1767.1°61.2°
C32C26C28H2564.6°58.7°
C32C26C28H26176.1°178.6°
C26C32H31H32119.2°120.4°
C19C18C16H4121.0°120.0°
C19C18C16H5121.0°120.0°
C19C18C16C26152.3°177.7°
C19C18C16C1518.2°62.3°
C19C18C16O17101.5°57.7°
C19C18H4H5116.9°120.0°
C18C19H6H7119.0°119.9°
C18C19C20H19167.3°60.0°
C18C19C20H2073.5°60.0°
C18C16C26C15134.4°120.0°
C18C16C26O17112.9°120.0°
C18C16C26C28167.0°59.1°
C18C16C15C0979.2°130.7°
C18C16C15O17119.2°119.9°
C18C16C15C1499.2°49.3°
C16C18H4H5116.9°120.0°
C16C18C19H674.3°59.9°
C16C18C19H745.0°60.0°
C18C16O17H18180.0°60.1°
C18C16C26H2472.5°61.0°
C16C26C28H24120.0°120.1°
C16C26C28C29177.8°178.7°
C26C16C15C0956.7°109.3°
C26C16C15O17104.8°120.1°
C26C16C15C14124.9°70.7°
C26C16C18H431.3°57.7°
C26C16C18H586.6°62.3°
C26C16O17H1859.5°59.9°
C16C26C28H2557.4°61.3°
C16C26C28H2661.8°58.7°
C16C26C32H3168.3°65.6°
C16C26C32H3251.2°54.7°
C26C28C29H25120.4°120.0°
C26C28C29H26120.4°120.0°
C28C26C16C1558.5°60.9°
C28C26C16O1754.1°179.0°
C26C28H25H26118.9°119.9°
C26C28C29H2770.1°178.7°
C26C28C29H28170.3°58.6°
C28C26C32H3157.6°174.4°
C28C26C32H32177.1°65.2°
C29C28C26H2462.2°58.6°
C29C28H25H26118.8°120.0°
C28C29H27H28119.3°120.0°
C28C29C30H29170.2°65.2°
C28C29C30H3070.1°174.6°
F11C10C09C12179.9°179.7°
F11C10C09C15179.5°179.7°
F11C10C12C13180.0°179.8°
F11C10C12H10.1°0.4°
C10C09C15C16179.4°180.0°
C10C09C15C141.0°0.1°
C09C10C12C130.1°0.1°
C09C10C12H1180.0°180.0°
C09C15C16C14178.4°180.0°
C09C15C16O17161.5°10.8°
C15C09C10C120.6°0.1°
C09C15C14C131.0°0.0°
C09C15C14H3179.1°180.0°
C16C15C14C13179.4°180.0°
C16C15C14H30.6°0.0°
C15C16C18H4102.8°177.7°
C15C16C18H5139.2°57.7°
C15C16O17H1856.9°180.0°
C15C16C26H2462.0°179.0°
O17C16C15C1420.1°169.2°
O17C16C18H4137.5°62.3°
O17C16C18H519.5°177.7°
O17C16C26H24174.6°59.0°
C10C12C13H1180.0°179.9°
C10C12C13C140.0°0.1°
C10C12C13H2180.0°180.0°
C15C14C13C120.5°0.0°
C15C14C13H3180.0°180.0°
C15C14C13H2179.5°180.0°
C12C13C14H2180.0°179.9°
C12C13C14H3179.6°180.0°
C14C13C12H1180.0°180.0°
H1C12C13H20.0°0.1°
H2C13C14H30.5°0.0°
H4C18C19H6164.7°180.0°
H4C18C19H776.0°60.0°
H5C18C19H646.7°60.1°
H5C18C19H7166.1°180.0°
H6C19C20H1947.0°180.0°
H6C19C20H20166.2°60.0°
H7C19C20H1972.3°59.9°
H7C19C20H2046.8°180.0°
H8N21C20H19166.9°119.9°
H8N21C20H2047.7°120.0°
H9C01H10H11120.0°120.0°
H9C01C02H1259.6°60.0°
H9C01C02H1359.6°59.9°
H10C01C02H1260.4°60.1°
H10C01C02H13179.6°180.0°
H11C01C02H12179.6°180.0°
H11C01C02H1360.4°60.0°
H14C04C05H150.1°0.0°
H15C05C06H160.4°0.0°
H21C25H22H23120.0°119.9°
H24C26C28H25177.5°178.6°
H24C26C28H2658.2°61.4°
H24C26C32H31174.7°54.5°
H24C26C32H3265.8°174.9°
H25C28C29H27169.5°61.3°
H25C28C29H2849.9°178.6°
H26C28C29H2750.3°58.6°
H26C28C29H2869.3°61.4°
H27C29C30H2950.0°54.8°
H27C29C30H30169.6°65.5°
H28C29C30H2969.5°174.8°
H28C29C30H3050.1°54.6°
H33C35C36H35163.2°65.0°
H34C35C36H3577.5°175.0°
H35C36O38H3660.6°180.0°
H35C36C39H37107.6°65.0°
H35C36C39H38133.9°175.0°
H37C39N40H3959.3°63.9°
H37C39N40H4060.8°60.1°
H38C39N40H3959.2°176.0°
H38C39N40H40179.3°60.0°

222624

PDB entries from 2024-07-17

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