93G
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.36Å | 1.35Å | |
N1 | C6 | sing | 1.35Å | 1.36Å | |
C2 | N2 | sing | 1.37Å | 1.34Å | |
C2 | N3 | doub | 1.31Å | 1.36Å | |
N3 | C4 | sing | 1.35Å | 1.36Å | |
C4 | C5 | doub | 1.40Å | 1.37Å | Aromatic |
C4 | N9 | sing | 1.34Å | 1.37Å | Aromatic |
C5 | C6 | sing | 1.41Å | 1.41Å | |
C5 | N7 | sing | 1.38Å | 1.36Å | Aromatic |
C6 | O6 | doub | 1.22Å | 1.36Å | |
N7 | C8 | sing | 1.35Å | 1.36Å | Aromatic |
N7 | CM7 | sing | 1.47Å | 1.53Å | |
C8 | N9 | doub | 1.31Å | 1.36Å | Aromatic |
N9 | C1' | sing | 1.47Å | 1.46Å | |
CG | C2' | sing | 1.47Å | 1.49Å | |
CG | CD1 | doub | 1.40Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.40Å | 1.39Å | Aromatic |
OH | CZ | sing | 1.35Å | 1.34Å | |
CN | NN | sing | 1.35Å | 1.41Å | |
CN | ON | doub | 1.22Å | 1.22Å | |
CN | CE2 | sing | 1.48Å | 1.50Å | |
CZ | CE1 | doub | 1.39Å | 1.39Å | Aromatic |
CZ | CE2 | sing | 1.40Å | 1.37Å | Aromatic |
C1' | C2' | sing | 1.51Å | 1.51Å | |
C2' | O2' | doub | 1.21Å | 1.24Å | |
CD1 | CE1 | sing | 1.38Å | 1.39Å | Aromatic |
CD2 | CE2 | doub | 1.39Å | 1.38Å | Aromatic |
N1 | HN1 | sing | 0.97Å | 1.00Å | |
N2 | HN2 | sing | 0.97Å | 1.00Å | |
N2 | HN2A | sing | 0.97Å | 1.00Å | |
C8 | H8 | sing | 1.08Å | 1.08Å | |
OH | HOH | sing | 0.97Å | 0.95Å | |
NN | HNN | sing | 0.97Å | 1.00Å | |
NN | HNNA | sing | 0.97Å | 1.00Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
C1' | H1'A | sing | 1.09Å | 1.10Å | |
CD1 | HD1 | sing | 1.08Å | 1.08Å | |
CD2 | HD2 | sing | 1.08Å | 1.08Å | |
CE1 | HE1 | sing | 1.08Å | 1.08Å | |
CM7 | HM7 | sing | 1.09Å | 1.10Å | |
CM7 | HM7A | sing | 1.09Å | 1.10Å | |
CM7 | HM7B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | N1 | C6 | 121.0° | 120.3° |
N1 | C2 | N2 | 121.1° | 119.0° |
N1 | C2 | N3 | 119.6° | 122.0° |
C2 | N1 | HN1 | 119.5° | 119.9° |
N1 | C6 | C5 | 119.1° | 118.4° |
N1 | C6 | O6 | 116.7° | 120.8° |
C6 | N1 | HN1 | 119.5° | 119.9° |
N2 | C2 | N3 | 119.2° | 119.0° |
C2 | N2 | HN2 | 120.0° | 120.0° |
C2 | N2 | HN2A | 120.0° | 120.1° |
C2 | N3 | C4 | 121.7° | 121.0° |
N3 | C4 | C5 | 119.0° | 119.2° |
N3 | C4 | N9 | 134.6° | 133.9° |
C5 | C4 | N9 | 106.3° | 106.9° |
C4 | C5 | C6 | 119.5° | 119.1° |
C4 | C5 | N7 | 109.4° | 106.2° |
C4 | N9 | C8 | 108.7° | 109.9° |
C4 | N9 | C1' | 124.3° | 125.1° |
C6 | C5 | N7 | 131.1° | 134.7° |
C5 | C6 | O6 | 124.1° | 120.8° |
C5 | N7 | C8 | 106.8° | 107.1° |
C5 | N7 | CM7 | 122.6° | 126.4° |
C8 | N7 | CM7 | 130.6° | 126.5° |
N7 | C8 | N9 | 108.8° | 110.0° |
N7 | C8 | H8 | 125.6° | 125.0° |
N7 | CM7 | HM7 | 109.5° | 109.5° |
N7 | CM7 | HM7A | 109.4° | 109.5° |
N7 | CM7 | HM7B | 109.5° | 109.4° |
C8 | N9 | C1' | 127.0° | 125.1° |
N9 | C8 | H8 | 125.6° | 125.0° |
N9 | C1' | C2' | 117.1° | 109.5° |
N9 | C1' | H1' | 107.5° | 109.5° |
N9 | C1' | H1'A | 107.5° | 109.5° |
C2' | CG | CD1 | 118.7° | 120.0° |
C2' | CG | CD2 | 121.1° | 120.0° |
CG | C2' | C1' | 114.8° | 120.0° |
CG | C2' | O2' | 119.9° | 120.0° |
CD1 | CG | CD2 | 120.2° | 120.0° |
CG | CD1 | CE1 | 119.0° | 120.2° |
CG | CD1 | HD1 | 120.5° | 119.9° |
CG | CD2 | CE2 | 120.8° | 119.7° |
CG | CD2 | HD2 | 119.6° | 120.1° |
OH | CZ | CE1 | 119.8° | 120.0° |
OH | CZ | CE2 | 118.6° | 120.0° |
CZ | OH | HOH | 109.5° | 114.0° |
NN | CN | ON | 120.4° | 120.0° |
NN | CN | CE2 | 119.0° | 120.0° |
CN | NN | HNN | 120.0° | 120.0° |
CN | NN | HNNA | 120.0° | 120.0° |
ON | CN | CE2 | 120.6° | 120.0° |
CN | CE2 | CZ | 121.2° | 120.1° |
CN | CE2 | CD2 | 119.9° | 120.1° |
CE1 | CZ | CE2 | 121.5° | 120.0° |
CZ | CE1 | CD1 | 119.5° | 120.3° |
CZ | CE1 | HE1 | 120.3° | 119.9° |
CZ | CE2 | CD2 | 118.9° | 119.8° |
C1' | C2' | O2' | 125.3° | 120.0° |
C2' | C1' | H1' | 107.5° | 109.5° |
C2' | C1' | H1'A | 107.5° | 109.4° |
CE1 | CD1 | HD1 | 120.5° | 119.9° |
CD1 | CE1 | HE1 | 120.3° | 119.8° |
CE2 | CD2 | HD2 | 119.6° | 120.2° |
HN2 | N2 | HN2A | 120.0° | 119.9° |
HNN | NN | HNNA | 120.0° | 120.1° |
H1' | C1' | H1'A | 109.5° | 109.5° |
HM7 | CM7 | HM7A | 109.5° | 109.4° |
HM7 | CM7 | HM7B | 109.5° | 109.5° |
HM7A | CM7 | HM7B | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | N1 | C6 | HN1 | 180.0° | 179.6° |
N1 | C2 | N2 | N3 | 176.4° | 180.0° |
N1 | C2 | N3 | C4 | 1.0° | 0.0° |
C2 | N1 | C6 | C5 | 0.1° | 0.0° |
C2 | N1 | C6 | O6 | 176.8° | 180.0° |
N1 | C2 | N2 | HN2 | 176.3° | 0.0° |
N1 | C2 | N2 | HN2A | 3.6° | 180.0° |
C6 | N1 | C2 | N2 | 178.4° | 180.0° |
C6 | N1 | C2 | N3 | 2.1° | 0.0° |
N1 | C6 | C5 | C4 | 3.3° | 0.0° |
N1 | C6 | C5 | O6 | 176.5° | 180.0° |
N1 | C6 | C5 | N7 | 178.6° | 180.0° |
N2 | C2 | N3 | C4 | 177.5° | 180.0° |
N2 | C2 | N1 | HN1 | 1.6° | 0.3° |
C2 | N2 | HN2 | HN2A | 180.0° | 180.0° |
C2 | N3 | C4 | C5 | 2.2° | 0.1° |
C2 | N3 | C4 | N9 | 176.9° | 180.0° |
N3 | C2 | N1 | HN1 | 177.9° | 179.7° |
N3 | C2 | N2 | HN2 | 0.0° | 180.0° |
N3 | C2 | N2 | HN2A | 180.0° | 0.0° |
N3 | C4 | C5 | N9 | 176.1° | 179.9° |
N3 | C4 | C5 | C6 | 4.3° | 0.1° |
N3 | C4 | C5 | N7 | 177.2° | 180.0° |
N3 | C4 | N9 | C8 | 176.4° | 180.0° |
N3 | C4 | N9 | C1' | 2.1° | 0.1° |
C4 | C5 | C6 | N7 | 178.1° | 179.9° |
C4 | C5 | C6 | O6 | 179.8° | 180.0° |
C4 | C5 | N7 | C8 | 0.6° | 0.0° |
C4 | C5 | N7 | CM7 | 177.2° | 180.0° |
C5 | C4 | N9 | C8 | 1.2° | 0.1° |
C5 | C4 | N9 | C1' | 177.3° | 180.0° |
N9 | C4 | C5 | C6 | 179.6° | 180.0° |
N9 | C4 | C5 | N7 | 1.1° | 0.0° |
C4 | N9 | C8 | N7 | 0.9° | 0.1° |
C4 | N9 | C8 | C1' | 178.4° | 179.9° |
C4 | N9 | C1' | C2' | 141.8° | 85.0° |
C4 | N9 | C8 | H8 | 179.1° | 180.0° |
C4 | N9 | C1' | H1' | 20.7° | 155.0° |
C4 | N9 | C1' | H1'A | 97.1° | 35.0° |
C6 | C5 | N7 | C8 | 178.9° | 180.0° |
C6 | C5 | N7 | CM7 | 1.0° | 0.1° |
C5 | C6 | N1 | HN1 | 179.9° | 179.7° |
N7 | C5 | C6 | O6 | 2.1° | 0.1° |
C5 | N7 | C8 | CM7 | 177.6° | 180.0° |
C5 | N7 | C8 | N9 | 0.2° | 0.0° |
C5 | N7 | C8 | H8 | 179.8° | 180.0° |
C5 | N7 | CM7 | HM7 | 180.0° | 90.0° |
C5 | N7 | CM7 | HM7A | 60.0° | 150.0° |
C5 | N7 | CM7 | HM7B | 60.0° | 30.0° |
O6 | C6 | N1 | HN1 | 3.2° | 0.3° |
N7 | C8 | N9 | H8 | 180.0° | 180.0° |
N7 | C8 | N9 | C1' | 177.5° | 180.0° |
C8 | N7 | CM7 | HM7 | 2.8° | 90.0° |
C8 | N7 | CM7 | HM7A | 122.7° | 30.0° |
C8 | N7 | CM7 | HM7B | 117.3° | 150.0° |
CM7 | N7 | C8 | N9 | 177.8° | 180.0° |
CM7 | N7 | C8 | H8 | 2.2° | 0.0° |
N7 | CM7 | HM7 | HM7A | 120.0° | 120.0° |
N7 | CM7 | HM7 | HM7B | 120.0° | 120.0° |
N7 | CM7 | HM7A | HM7B | 120.0° | 120.0° |
C8 | N9 | C1' | C2' | 40.0° | 95.1° |
C8 | N9 | C1' | H1' | 161.1° | 24.9° |
C8 | N9 | C1' | H1'A | 81.1° | 144.9° |
N9 | C1' | C2' | CG | 172.4° | 180.0° |
N9 | C1' | C2' | H1' | 121.1° | 120.0° |
N9 | C1' | C2' | H1'A | 121.1° | 120.0° |
N9 | C1' | C2' | O2' | 8.5° | 0.0° |
C1' | N9 | C8 | H8 | 2.5° | 0.1° |
N9 | C1' | H1' | H1'A | 116.5° | 120.0° |
C2' | CG | CD1 | CD2 | 178.4° | 179.8° |
CG | C2' | C1' | O2' | 179.2° | 180.0° |
C2' | CG | CD1 | CE1 | 179.8° | 180.0° |
C2' | CG | CD2 | CE2 | 179.2° | 179.9° |
CG | C2' | C1' | H1' | 51.3° | 60.0° |
CG | C2' | C1' | H1'A | 66.5° | 60.0° |
C2' | CG | CD1 | HD1 | 0.2° | 0.0° |
C2' | CG | CD2 | HD2 | 0.8° | 0.0° |
CG | CD1 | CE1 | CZ | 0.3° | 0.0° |
CD1 | CG | C2' | C1' | 166.4° | 0.0° |
CD1 | CG | C2' | O2' | 14.4° | 180.0° |
CG | CD1 | CE1 | HD1 | 180.0° | 180.0° |
CD1 | CG | CD2 | CE2 | 0.8° | 0.2° |
CD1 | CG | CD2 | HD2 | 179.2° | 179.7° |
CG | CD1 | CE1 | HE1 | 179.7° | 179.7° |
CG | CD2 | CE2 | CN | 179.4° | 179.7° |
CG | CD2 | CE2 | CZ | 0.7° | 0.1° |
CD2 | CG | C2' | C1' | 15.2° | 179.8° |
CD2 | CG | C2' | O2' | 164.0° | 0.2° |
CD2 | CG | CD1 | CE1 | 1.3° | 0.2° |
CG | CD2 | CE2 | HD2 | 180.0° | 179.9° |
CD2 | CG | CD1 | HD1 | 178.6° | 179.8° |
OH | CZ | CE2 | CN | 1.2° | 0.3° |
OH | CZ | CE1 | CE2 | 178.4° | 179.7° |
OH | CZ | CE1 | CD1 | 179.6° | 180.0° |
OH | CZ | CE2 | CD2 | 179.8° | 179.9° |
OH | CZ | CE1 | HE1 | 0.4° | 0.3° |
NN | CN | ON | CE2 | 179.6° | 180.0° |
NN | CN | CE2 | CZ | 28.6° | 179.9° |
NN | CN | CE2 | CD2 | 152.7° | 0.3° |
CN | NN | HNN | HNNA | 180.0° | 179.9° |
ON | CN | CE2 | CZ | 151.0° | 0.1° |
ON | CN | CE2 | CD2 | 27.7° | 179.7° |
ON | CN | NN | HNN | 0.0° | 0.0° |
ON | CN | NN | HNNA | 180.0° | 180.0° |
CN | CE2 | CZ | CE1 | 179.6° | 180.0° |
CN | CE2 | CZ | CD2 | 178.7° | 179.6° |
CE2 | CN | NN | HNN | 179.6° | 179.9° |
CE2 | CN | NN | HNNA | 0.4° | 0.0° |
CN | CE2 | CD2 | HD2 | 0.6° | 0.4° |
CZ | CE1 | CD1 | HE1 | 180.0° | 179.7° |
CE1 | CZ | CE2 | CD2 | 1.8° | 0.4° |
CE1 | CZ | OH | HOH | 180.0° | 90.0° |
CZ | CE1 | CD1 | HD1 | 179.7° | 180.0° |
CE2 | CZ | CE1 | CD1 | 1.3° | 0.3° |
CE2 | CZ | OH | HOH | 1.6° | 89.6° |
CZ | CE2 | CD2 | HD2 | 179.3° | 180.0° |
CE2 | CZ | CE1 | HE1 | 178.8° | 180.0° |
C2' | C1' | H1' | H1'A | 116.5° | 119.9° |
O2' | C2' | C1' | H1' | 129.6° | 120.0° |
O2' | C2' | C1' | H1'A | 112.6° | 120.0° |
HD1 | CD1 | CE1 | HE1 | 0.4° | 0.3° |
HM7 | CM7 | HM7A | HM7B | 120.0° | 120.0° |