8YP

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C8	C7	sing	1.53Å	1.54Å
C7	C6	sing	1.53Å	1.56Å
C5	C6	sing	1.53Å	1.53Å
C5	C4	sing	1.53Å	1.54Å
C1	C2	sing	1.53Å	1.55Å
C3	C4	sing	1.53Å	1.54Å
C3	C2	sing	1.53Å	1.54Å
C1	H2	sing	1.09Å	1.10Å
C1	H3	sing	1.09Å	1.10Å
C1	H1	sing	1.09Å	1.10Å
C2	H4	sing	1.09Å	1.10Å
C2	H5	sing	1.09Å	1.10Å
C3	H7	sing	1.09Å	1.10Å
C3	H6	sing	1.09Å	1.10Å
C4	H9	sing	1.09Å	1.10Å
C4	H8	sing	1.09Å	1.10Å
C5	H11	sing	1.09Å	1.10Å
C5	H10	sing	1.09Å	1.10Å
C6	H13	sing	1.09Å	1.10Å
C6	H12	sing	1.09Å	1.10Å
C7	H15	sing	1.09Å	1.10Å
C7	H14	sing	1.09Å	1.10Å
C8	H17	sing	1.09Å	1.10Å
C8	H18	sing	1.09Å	1.10Å
C8	C9	sing	1.53Å	47.24Å
C9	C10	sing	1.51Å	0.00Å
C10	O1	doub	1.21Å	0.00Å
C9	H16	sing	1.09Å	0.00Å
C9	H19	sing	1.09Å	0.00Å
C10	H20	sing	1.08Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C8	C7	C6	110.4°	109.5°
C8	C7	H15	109.3°	109.4°
C8	C7	H14	109.2°	109.5°
C7	C8	H17	107.5°	109.5°
C7	C8	H18	107.6°	109.5°
C7	C8	C9	117.1°	109.5°
C7	C6	C5	115.1°	109.5°
C7	C6	H13	108.0°	109.5°
C7	C6	H12	108.0°	109.5°
C6	C7	H15	109.2°	109.5°
C6	C7	H14	109.2°	109.5°
C6	C5	C4	107.4°	109.5°
C6	C5	H11	110.0°	109.5°
C6	C5	H10	110.0°	109.4°
C5	C6	H13	108.0°	109.5°
C5	C6	H12	108.0°	109.4°
C5	C4	C3	111.4°	109.4°
C5	C4	H9	108.9°	109.5°
C5	C4	H8	109.0°	109.4°
C4	C5	H11	109.9°	109.5°
C4	C5	H10	110.0°	109.5°
C1	C2	C3	111.6°	109.4°
C2	C1	H2	109.5°	109.5°
C2	C1	H3	109.5°	109.5°
C2	C1	H1	109.4°	109.5°
C1	C2	H4	109.0°	109.5°
C1	C2	H5	108.9°	109.4°
C4	C3	C2	111.7°	109.4°
C4	C3	H7	108.9°	109.5°
C4	C3	H6	108.9°	109.5°
C3	C4	H9	109.0°	109.4°
C3	C4	H8	109.0°	109.5°
C3	C2	H4	108.9°	109.5°
C3	C2	H5	108.9°	109.5°
C2	C3	H7	108.9°	109.5°
C2	C3	H6	108.9°	109.5°
H2	C1	H3	109.5°	109.4°
H2	C1	H1	109.5°	109.5°
H3	C1	H1	109.5°	109.5°
H4	C2	H5	109.5°	109.5°
H7	C3	H6	109.5°	109.4°
H9	C4	H8	109.5°	109.5°
H11	C5	H10	109.5°	109.4°
H13	C6	H12	109.5°	109.4°
H15	C7	H14	109.5°	109.5°
H17	C8	H18	109.5°	109.5°
H17	C8	C9	107.5°	109.4°
H18	C8	C9	107.5°	109.4°
C8	C9	C10	90.0°	109.5°
C8	C9	H16	90.0°	109.4°
C8	C9	H19	90.0°	109.4°
C9	C10	O1	90.0°	120.0°
C10	C9	H16	90.0°	109.5°
C10	C9	H19	90.0°	109.4°
C9	C10	H20	90.0°	120.1°
O1	C10	H20	90.0°	120.0°
H16	C9	H19	90.0°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C8	C7	C6	H15	120.2°	120.0°
C8	C7	C6	H14	120.1°	120.0°
C8	C7	C6	C5	128.0°	180.0°
C8	C7	C6	H13	7.1°	60.0°
C8	C7	C6	H12	111.2°	60.0°
C8	C7	H15	H14	119.5°	120.0°
C7	C8	H17	H18	116.6°	120.0°
C7	C8	H17	C9	126.9°	120.0°
C7	C8	H18	C9	126.9°	120.1°
C7	C8	C9	C10	90.0°	180.0°
C7	C8	C9	H16	90.0°	60.0°
C7	C8	C9	H19	90.0°	60.0°
C7	C6	C5	H13	120.8°	120.1°
C7	C6	C5	H12	120.8°	120.0°
C7	C6	C5	C4	150.6°	180.0°
C7	C6	C5	H11	89.8°	59.9°
C7	C6	C5	H10	30.9°	60.0°
C7	C6	H13	H12	117.4°	120.0°
C6	C7	H15	H14	119.6°	120.0°
C6	C7	C8	H17	49.7°	60.0°
C6	C7	C8	H18	68.1°	60.0°
C6	C7	C8	C9	170.8°	180.0°
C6	C5	C4	H11	119.7°	120.0°
C6	C5	C4	H10	119.7°	120.0°
C6	C5	C4	C3	178.5°	180.0°
C6	C5	C4	H9	58.2°	60.0°
C6	C5	C4	H8	61.2°	60.1°
C6	C5	H11	H10	121.0°	120.0°
C5	C6	H13	H12	117.4°	119.9°
C5	C6	C7	H15	111.9°	60.0°
C5	C6	C7	H14	7.8°	60.0°
C5	C4	C3	H9	120.3°	120.0°
C5	C4	C3	H8	120.3°	120.0°
C5	C4	C3	C2	145.8°	NaN°
C5	C4	C3	H7	93.9°	60.0°
C5	C4	C3	H6	25.4°	60.0°
C5	C4	H9	H8	119.1°	120.0°
C4	C5	H11	H10	120.9°	120.0°
C4	C5	C6	H13	29.8°	59.9°
C4	C5	C6	H12	88.6°	60.0°
C1	C2	C3	C4	101.2°	NaN°
C1	C2	C3	H4	120.3°	120.0°
C1	C2	C3	H5	120.3°	119.9°
C2	C1	H2	H3	120.0°	120.0°
C2	C1	H2	H1	120.0°	120.0°
C2	C1	H3	H1	120.0°	120.0°
C1	C2	H4	H5	119.1°	119.9°
C1	C2	C3	H7	138.5°	60.0°
C1	C2	C3	H6	19.2°	60.0°
C4	C3	C2	H7	120.3°	120.0°
C4	C3	C2	H6	120.4°	120.0°
C4	C3	C2	H4	138.5°	60.0°
C4	C3	C2	H5	19.1°	60.1°
C4	C3	H7	H6	119.0°	120.0°
C3	C4	H9	H8	119.1°	120.0°
C3	C4	C5	H11	61.8°	60.0°
C3	C4	C5	H10	58.8°	60.0°
C3	C2	C1	H2	180.0°	60.0°
C3	C2	C1	H3	60.0°	180.0°
C3	C2	C1	H1	60.0°	60.0°
C3	C2	H4	H5	119.0°	120.1°
C2	C3	H7	H6	118.9°	120.0°
C2	C3	C4	H9	25.5°	60.0°
C2	C3	C4	H8	93.9°	60.0°
H2	C1	H3	H1	120.0°	120.0°
H2	C1	C2	H4	59.7°	179.9°
H2	C1	C2	H5	59.7°	60.0°
H3	C1	C2	H4	60.3°	60.0°
H3	C1	C2	H5	179.7°	60.0°
H1	C1	C2	H4	179.7°	60.0°
H1	C1	C2	H5	60.3°	180.0°
H4	C2	C3	H7	18.2°	180.0°
H4	C2	C3	H6	101.1°	60.0°
H5	C2	C3	H7	101.2°	59.9°
H5	C2	C3	H6	139.5°	179.9°
H7	C3	C4	H9	145.8°	180.0°
H7	C3	C4	H8	26.4°	60.0°
H6	C3	C4	H9	94.8°	60.0°
H6	C3	C4	H8	145.8°	180.0°
H9	C4	C5	H11	177.9°	180.0°
H9	C4	C5	H10	61.5°	60.0°
H8	C4	C5	H11	58.5°	60.0°
H8	C4	C5	H10	179.2°	180.0°
H11	C5	C6	H13	149.4°	180.0°
H11	C5	C6	H12	31.1°	60.0°
H10	C5	C6	H13	89.9°	60.1°
H10	C5	C6	H12	151.7°	180.0°
H13	C6	C7	H15	127.3°	179.9°
H13	C6	C7	H14	113.0°	60.1°
H12	C6	C7	H15	9.0°	60.0°
H12	C6	C7	H14	128.7°	NaN°
H15	C7	C8	H17	70.4°	180.0°
H15	C7	C8	H18	171.7°	60.0°
H15	C7	C8	C9	50.6°	60.0°
H14	C7	C8	H17	169.9°	60.0°
H14	C7	C8	H18	52.0°	180.0°
H14	C7	C8	C9	69.0°	60.0°
H17	C8	H18	C9	116.5°	119.9°
H17	C8	C9	C10	90.0°	59.9°
H17	C8	C9	H16	90.0°	180.0°
H17	C8	C9	H19	90.0°	60.0°
H18	C8	C9	C10	90.0°	60.0°
H18	C8	C9	H16	90.0°	60.1°
H18	C8	C9	H19	90.0°	180.0°
C8	C9	C10	H16	90.0°	120.0°
C8	C9	C10	H19	90.0°	120.0°
C8	C9	C10	O1	90.0°	125.0°
C8	C9	H16	H19	90.0°	119.9°
C8	C9	C10	H20	90.0°	54.9°
C9	C10	O1	H20	90.0°	179.9°
C10	C9	H16	H19	90.0°	120.0°
O1	C10	C9	H16	90.0°	5.0°
O1	C10	C9	H19	90.0°	115.0°
H16	C9	C10	H20	90.0°	174.9°
H19	C9	C10	H20	90.0°	65.1°

Release date:	2017-04-26
Definition date:	2017-03-21
Last modified:	2017-04-21
Release status:	REL
Processing site:	RCSB
Derived from:	5U0L