8YL

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
CAC	NAY	sing	1.47Å	0.00Å
CAD	NAY	sing	1.46Å	0.00Å
NAY	C	sing	1.35Å	0.00Å
C	CA	sing	1.51Å	0.00Å
C	O	doub	1.21Å	0.00Å
CA	N	sing	1.48Å	0.00Å
CA	CB	sing	1.54Å	0.00Å
N	CD	sing	1.48Å	0.00Å
CD	CG	sing	1.55Å	0.00Å
CB	CG	sing	1.55Å	0.00Å
CG	SAO	sing	1.81Å	0.00Å
OAH	CAP	doub	1.22Å	0.00Å
SAO	CAT	sing	1.76Å	0.00Å
OAE	CAP	sing	1.35Å	0.00Å
CAP	CAS	sing	1.41Å	0.00Å
CAT	CAS	doub	1.35Å	0.00Å
CAT	CAV	sing	1.51Å	0.00Å
CAS	NAN	sing	1.40Å	0.00Å
CAV	CAB	sing	1.53Å	0.00Å
CAV	CAZ	sing	1.54Å	0.00Å
NAN	CAZ	sing	1.47Å	0.00Å
CAZ	CBA	sing	1.53Å	0.00Å
OAF	CAQ	doub	1.21Å	0.00Å
CAQ	OAI	sing	1.34Å	0.00Å
CAQ	CBA	sing	1.51Å	0.00Å
CBA	CAU	sing	1.53Å	0.00Å
CAU	OAJ	sing	1.43Å	0.00Å
CAU	CAA	sing	1.53Å	0.00Å
CAA	H1	sing	1.09Å	0.00Å
CAA	H2	sing	1.09Å	0.00Å
CAA	H3	sing	1.09Å	0.00Å
CAU	H4	sing	1.09Å	0.00Å
OAJ	H5	sing	0.97Å	0.00Å
CBA	H6	sing	1.09Å	0.00Å
OAI	H7	sing	0.97Å	0.00Å
CAZ	H8	sing	1.09Å	0.00Å
CAV	H9	sing	1.09Å	0.00Å
CAB	H10	sing	1.09Å	0.00Å
CAB	H11	sing	1.09Å	0.00Å
CAB	H12	sing	1.09Å	0.00Å
NAN	H13	sing	0.97Å	0.00Å
OAE	H14	sing	0.97Å	0.00Å
CG	H15	sing	1.09Å	0.00Å
CB	H16	sing	1.09Å	0.00Å
CB	H17	sing	1.09Å	0.00Å
CD	H18	sing	1.09Å	0.00Å
CD	H19	sing	1.09Å	0.00Å
N	H20	sing	1.01Å	0.00Å
CA	H22	sing	1.09Å	0.00Å
CAD	H23	sing	1.09Å	0.00Å
CAD	H24	sing	1.09Å	0.00Å
CAD	H25	sing	1.09Å	0.00Å
CAC	H26	sing	1.09Å	0.00Å
CAC	H27	sing	1.09Å	0.00Å
CAC	H28	sing	1.09Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
CAC	NAY	CAD	90.0°	120.0°
CAC	NAY	C	90.0°	120.0°
NAY	CAC	H26	90.0°	109.5°
NAY	CAC	H27	90.0°	109.4°
NAY	CAC	H28	90.0°	109.5°
CAD	NAY	C	90.0°	120.0°
NAY	CAD	H23	90.0°	109.5°
NAY	CAD	H24	90.0°	109.5°
NAY	CAD	H25	90.0°	109.5°
NAY	C	CA	90.0°	120.0°
NAY	C	O	90.0°	120.0°
CA	C	O	90.0°	120.0°
C	CA	N	90.0°	109.9°
C	CA	CB	90.0°	109.9°
C	CA	H22	90.0°	110.0°
N	CA	CB	90.0°	107.2°
CA	N	CD	90.0°	108.6°
CA	N	H20	90.0°	111.0°
N	CA	H22	90.0°	109.9°
CA	CB	CG	90.0°	103.0°
CA	CB	H16	90.0°	110.7°
CA	CB	H17	90.0°	110.9°
CB	CA	H22	90.0°	109.9°
N	CD	CG	90.0°	104.8°
N	CD	H18	90.0°	110.4°
N	CD	H19	90.0°	110.5°
CD	N	H20	90.0°	111.0°
CD	CG	CB	90.0°	101.7°
CD	CG	SAO	90.0°	111.0°
CD	CG	H15	90.0°	111.0°
CG	CD	H18	90.0°	110.4°
CG	CD	H19	90.0°	110.4°
CB	CG	SAO	90.0°	111.0°
CB	CG	H15	90.0°	111.0°
CG	CB	H16	90.0°	110.7°
CG	CB	H17	90.0°	110.7°
CG	SAO	CAT	90.0°	100.0°
SAO	CG	H15	90.0°	110.8°
OAH	CAP	OAE	90.0°	120.0°
OAH	CAP	CAS	90.0°	120.0°
SAO	CAT	CAS	90.0°	125.6°
SAO	CAT	CAV	90.0°	125.6°
OAE	CAP	CAS	90.0°	120.0°
CAP	OAE	H14	90.0°	114.0°
CAP	CAS	CAT	90.0°	123.7°
CAP	CAS	NAN	90.0°	123.6°
CAS	CAT	CAV	90.0°	108.8°
CAT	CAS	NAN	90.0°	112.7°
CAT	CAV	CAB	90.0°	110.4°
CAT	CAV	CAZ	90.0°	104.6°
CAT	CAV	H9	90.0°	110.5°
CAS	NAN	CAZ	90.0°	109.2°
CAS	NAN	H13	90.0°	125.4°
CAB	CAV	CAZ	90.0°	110.4°
CAB	CAV	H9	90.0°	110.4°
CAV	CAB	H10	90.0°	109.5°
CAV	CAB	H11	90.0°	109.5°
CAV	CAB	H12	90.0°	109.4°
CAV	CAZ	NAN	90.0°	104.7°
CAV	CAZ	CBA	90.0°	110.4°
CAV	CAZ	H8	90.0°	110.4°
CAZ	CAV	H9	90.0°	110.4°
NAN	CAZ	CBA	90.0°	110.4°
NAN	CAZ	H8	90.0°	110.4°
CAZ	NAN	H13	90.0°	125.4°
CAZ	CBA	CAQ	90.0°	109.5°
CAZ	CBA	CAU	90.0°	109.5°
CAZ	CBA	H6	90.0°	109.5°
CBA	CAZ	H8	90.0°	110.4°
OAF	CAQ	OAI	90.0°	120.0°
OAF	CAQ	CBA	90.0°	120.0°
OAI	CAQ	CBA	90.0°	120.0°
CAQ	OAI	H7	90.0°	117.0°
CAQ	CBA	CAU	90.0°	109.5°
CAQ	CBA	H6	90.0°	109.5°
CBA	CAU	OAJ	90.0°	109.5°
CBA	CAU	CAA	90.0°	109.4°
CBA	CAU	H4	90.0°	109.5°
CAU	CBA	H6	90.0°	109.5°
OAJ	CAU	CAA	90.0°	109.5°
OAJ	CAU	H4	90.0°	109.5°
CAU	OAJ	H5	90.0°	114.0°
CAU	CAA	H1	90.0°	109.4°
CAU	CAA	H2	90.0°	109.4°
CAU	CAA	H3	90.0°	109.5°
CAA	CAU	H4	90.0°	109.5°
H1	CAA	H2	90.0°	109.5°
H1	CAA	H3	90.0°	109.5°
H2	CAA	H3	90.0°	109.5°
H10	CAB	H11	90.0°	109.5°
H10	CAB	H12	90.0°	109.5°
H11	CAB	H12	90.0°	109.4°
H16	CB	H17	90.0°	110.6°
H18	CD	H19	90.0°	110.3°
H23	CAD	H24	90.0°	109.5°
H23	CAD	H25	90.0°	109.4°
H24	CAD	H25	90.0°	109.5°
H26	CAC	H27	90.0°	109.4°
H26	CAC	H28	90.0°	109.5°
H27	CAC	H28	90.0°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
CAC	NAY	CAD	C	90.0°	180.0°
CAC	NAY	C	CA	90.0°	0.0°
CAC	NAY	C	O	90.0°	180.0°
CAC	NAY	CAD	H23	90.0°	90.0°
CAC	NAY	CAD	H24	90.0°	30.0°
CAC	NAY	CAD	H25	90.0°	150.0°
NAY	CAC	H26	H27	90.0°	119.9°
NAY	CAC	H26	H28	90.0°	120.0°
NAY	CAC	H27	H28	90.0°	120.0°
CAD	NAY	C	CA	90.0°	180.0°
CAD	NAY	C	O	90.0°	0.1°
NAY	CAD	H23	H24	90.0°	120.0°
NAY	CAD	H23	H25	90.0°	119.9°
NAY	CAD	H24	H25	90.0°	120.0°
CAD	NAY	CAC	H26	90.0°	180.0°
CAD	NAY	CAC	H27	90.0°	60.0°
CAD	NAY	CAC	H28	90.0°	60.0°
NAY	C	CA	O	90.0°	180.0°
NAY	C	CA	N	90.0°	161.5°
NAY	C	CA	CB	90.0°	80.8°
NAY	C	CA	H22	90.0°	40.3°
C	NAY	CAD	H23	90.0°	90.0°
C	NAY	CAD	H24	90.0°	150.0°
C	NAY	CAD	H25	90.0°	29.9°
C	NAY	CAC	H26	90.0°	0.0°
C	NAY	CAC	H27	90.0°	120.0°
C	NAY	CAC	H28	90.0°	120.1°
C	CA	N	CB	90.0°	119.4°
C	CA	N	H22	90.0°	121.3°
C	CA	CB	H22	90.0°	121.2°
C	CA	N	CD	90.0°	118.4°
C	CA	CB	CG	90.0°	141.7°
C	CA	CB	H16	90.0°	99.9°
C	CA	CB	H17	90.0°	23.2°
C	CA	N	H20	90.0°	119.3°
O	C	CA	N	90.0°	18.5°
O	C	CA	CB	90.0°	99.2°
O	C	CA	H22	90.0°	139.7°
N	CA	CB	H22	90.0°	119.4°
CA	N	CD	H20	90.0°	122.3°
CA	N	CD	CG	90.0°	24.1°
N	CA	CB	CG	90.0°	22.3°
N	CA	CB	H16	90.0°	140.7°
N	CA	CB	H17	90.0°	96.2°
CA	N	CD	H18	90.0°	94.8°
CA	N	CD	H19	90.0°	143.0°
CB	CA	N	CD	90.0°	1.0°
CA	CB	CG	CD	90.0°	35.6°
CA	CB	CG	H16	90.0°	118.4°
CA	CB	CG	H17	90.0°	118.6°
CA	CB	CG	SAO	90.0°	153.8°
CA	CB	CG	H15	90.0°	82.5°
CA	CB	H16	H17	90.0°	123.3°
CB	CA	N	H20	90.0°	121.3°
N	CD	CG	H18	90.0°	118.9°
N	CD	CG	H19	90.0°	119.0°
N	CD	CG	CB	90.0°	37.1°
N	CD	CG	SAO	90.0°	155.2°
N	CD	CG	H15	90.0°	81.1°
N	CD	H18	H19	90.0°	122.4°
CD	N	CA	H22	90.0°	120.3°
CD	CG	CB	SAO	90.0°	118.1°
CD	CG	CB	H15	90.0°	118.1°
CD	CG	SAO	H15	90.0°	123.8°
CD	CG	SAO	CAT	90.0°	77.9°
CD	CG	CB	H16	90.0°	154.0°
CD	CG	CB	H17	90.0°	83.0°
CG	CD	H18	H19	90.0°	122.2°
CG	CD	N	H20	90.0°	98.2°
CB	CG	SAO	H15	90.0°	123.8°
CB	CG	SAO	CAT	90.0°	169.8°
CG	CB	H16	H17	90.0°	123.1°
CB	CG	CD	H18	90.0°	81.8°
CB	CG	CD	H19	90.0°	156.0°
CG	CB	CA	H22	90.0°	97.1°
CG	SAO	CAT	CAS	90.0°	114.6°
CG	SAO	CAT	CAV	90.0°	65.4°
SAO	CG	CB	H16	90.0°	87.8°
SAO	CG	CB	H17	90.0°	35.2°
SAO	CG	CD	H18	90.0°	36.3°
SAO	CG	CD	H19	90.0°	85.8°
OAH	CAP	OAE	CAS	90.0°	180.0°
OAH	CAP	CAS	CAT	90.0°	5.2°
OAH	CAP	CAS	NAN	90.0°	174.8°
OAH	CAP	OAE	H14	90.0°	0.0°
SAO	CAT	CAS	CAP	90.0°	0.0°
SAO	CAT	CAS	CAV	90.0°	180.0°
SAO	CAT	CAS	NAN	90.0°	180.0°
SAO	CAT	CAV	CAB	90.0°	61.2°
SAO	CAT	CAV	CAZ	90.0°	180.0°
SAO	CAT	CAV	H9	90.0°	61.2°
CAT	SAO	CG	H15	90.0°	46.0°
OAE	CAP	CAS	CAT	90.0°	174.8°
OAE	CAP	CAS	NAN	90.0°	5.2°
CAP	CAS	CAT	NAN	90.0°	180.0°
CAP	CAS	CAT	CAV	90.0°	180.0°
CAP	CAS	NAN	CAZ	90.0°	180.0°
CAP	CAS	NAN	H13	90.0°	0.0°
CAS	CAP	OAE	H14	90.0°	180.0°
CAS	CAT	CAV	CAB	90.0°	118.8°
CAS	CAT	CAV	CAZ	90.0°	0.0°
CAT	CAS	NAN	CAZ	90.0°	0.0°
CAS	CAT	CAV	H9	90.0°	118.8°
CAT	CAS	NAN	H13	90.0°	180.0°
CAV	CAT	CAS	NAN	90.0°	0.0°
CAT	CAV	CAB	CAZ	90.0°	115.1°
CAT	CAV	CAB	H9	90.0°	122.5°
CAT	CAV	CAZ	H9	90.0°	118.9°
CAT	CAV	CAZ	NAN	90.0°	0.0°
CAT	CAV	CAZ	CBA	90.0°	118.8°
CAT	CAV	CAZ	H8	90.0°	118.9°
CAT	CAV	CAB	H10	90.0°	47.3°
CAT	CAV	CAB	H11	90.0°	72.8°
CAT	CAV	CAB	H12	90.0°	167.3°
CAS	NAN	CAZ	CAV	90.0°	0.0°
CAS	NAN	CAZ	H13	90.0°	180.0°
CAS	NAN	CAZ	CBA	90.0°	118.8°
CAS	NAN	CAZ	H8	90.0°	118.9°
CAB	CAV	CAZ	H9	90.0°	122.4°
CAB	CAV	CAZ	NAN	90.0°	118.8°
CAB	CAV	CAZ	CBA	90.0°	0.0°
CAB	CAV	CAZ	H8	90.0°	122.4°
CAV	CAB	H10	H11	90.0°	120.0°
CAV	CAB	H10	H12	90.0°	120.0°
CAV	CAB	H11	H12	90.0°	120.0°
CAV	CAZ	NAN	CBA	90.0°	118.8°
CAV	CAZ	NAN	H8	90.0°	118.9°
CAV	CAZ	CBA	H8	90.0°	122.4°
CAV	CAZ	CBA	CAQ	90.0°	66.9°
CAV	CAZ	CBA	CAU	90.0°	173.1°
CAV	CAZ	CBA	H6	90.0°	53.2°
CAZ	CAV	CAB	H10	90.0°	67.9°
CAZ	CAV	CAB	H11	90.0°	172.1°
CAZ	CAV	CAB	H12	90.0°	52.1°
CAV	CAZ	NAN	H13	90.0°	179.9°
NAN	CAZ	CBA	H8	90.0°	122.3°
NAN	CAZ	CBA	CAQ	90.0°	48.4°
NAN	CAZ	CBA	CAU	90.0°	71.5°
NAN	CAZ	CBA	H6	90.0°	168.5°
NAN	CAZ	CAV	H9	90.0°	118.8°
CAZ	CBA	CAQ	OAF	90.0°	13.6°
CAZ	CBA	CAQ	OAI	90.0°	166.4°
CAZ	CBA	CAQ	CAU	90.0°	120.0°
CAZ	CBA	CAQ	H6	90.0°	120.0°
CAZ	CBA	CAU	H6	90.0°	120.0°
CAZ	CBA	CAU	OAJ	90.0°	54.5°
CAZ	CBA	CAU	CAA	90.0°	65.5°
CAZ	CBA	CAU	H4	90.0°	174.5°
CBA	CAZ	CAV	H9	90.0°	122.4°
CBA	CAZ	NAN	H13	90.0°	61.2°
OAF	CAQ	OAI	CBA	90.0°	180.0°
OAF	CAQ	CBA	CAU	90.0°	106.4°
OAF	CAQ	CBA	H6	90.0°	133.6°
OAF	CAQ	OAI	H7	90.0°	0.0°
OAI	CAQ	CBA	CAU	90.0°	73.6°
OAI	CAQ	CBA	H6	90.0°	46.4°
CAQ	CBA	CAU	H6	90.0°	120.0°
CAQ	CBA	CAU	OAJ	90.0°	65.5°
CAQ	CBA	CAU	CAA	90.0°	174.5°
CAQ	CBA	CAU	H4	90.0°	54.5°
CBA	CAQ	OAI	H7	90.0°	180.0°
CAQ	CBA	CAZ	H8	90.0°	170.8°
CBA	CAU	OAJ	CAA	90.0°	120.0°
CBA	CAU	OAJ	H4	90.0°	120.0°
CBA	CAU	CAA	H4	90.0°	120.0°
CBA	CAU	CAA	H1	90.0°	180.0°
CBA	CAU	CAA	H2	90.0°	60.0°
CBA	CAU	CAA	H3	90.0°	60.0°
CBA	CAU	OAJ	H5	90.0°	74.6°
CAU	CBA	CAZ	H8	90.0°	50.8°
OAJ	CAU	CAA	H4	90.0°	120.0°
OAJ	CAU	CAA	H1	90.0°	60.0°
OAJ	CAU	CAA	H2	90.0°	180.0°
OAJ	CAU	CAA	H3	90.0°	60.0°
OAJ	CAU	CBA	H6	90.0°	174.5°
CAU	CAA	H1	H2	90.0°	119.9°
CAU	CAA	H1	H3	90.0°	120.0°
CAU	CAA	H2	H3	90.0°	120.0°
CAA	CAU	OAJ	H5	90.0°	45.4°
CAA	CAU	CBA	H6	90.0°	54.5°
H1	CAA	H2	H3	90.0°	120.1°
H1	CAA	CAU	H4	90.0°	60.0°
H2	CAA	CAU	H4	90.0°	60.0°
H3	CAA	CAU	H4	90.0°	180.0°
H4	CAU	OAJ	H5	90.0°	165.4°
H4	CAU	CBA	H6	90.0°	65.5°
H6	CBA	CAZ	H8	90.0°	69.2°
H8	CAZ	CAV	H9	90.0°	0.0°
H8	CAZ	NAN	H13	90.0°	61.1°
H9	CAV	CAB	H10	90.0°	169.8°
H9	CAV	CAB	H11	90.0°	49.7°
H9	CAV	CAB	H12	90.0°	70.2°
H10	CAB	H11	H12	90.0°	120.0°
H15	CG	CB	H16	90.0°	35.9°
H15	CG	CB	H17	90.0°	158.9°
H15	CG	CD	H18	90.0°	160.1°
H15	CG	CD	H19	90.0°	37.9°
H16	CB	CA	H22	90.0°	21.3°
H17	CB	CA	H22	90.0°	144.4°
H18	CD	N	H20	90.0°	142.9°
H19	CD	N	H20	90.0°	20.7°
H20	N	CA	H22	90.0°	2.0°
H23	CAD	H24	H25	90.0°	120.0°
H26	CAC	H27	H28	90.0°	120.1°

Release date:	2017-12-13
Definition date:	2017-11-08
Last modified:	2020-06-17
Release status:	REL
Processing site:	PDBJ