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8VY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C4doub1.38Å1.39ÅAromatic
C5C6sing1.38Å1.39ÅAromatic
C4C3sing1.38Å1.39ÅAromatic
C6C1doub1.38Å1.39ÅAromatic
C3C3'sing1.51Å1.51Å
C3C2doub1.38Å1.39ÅAromatic
C1C2sing1.38Å1.39ÅAromatic
C1C1'sing1.51Å1.51Å
C1'BR1sing1.97Å1.82Å
C2H1sing1.08Å1.08Å
C4H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C1'H5sing1.09Å1.10Å
C1'H6sing1.09Å1.10Å
C3'H7sing1.09Å1.10Å
C3'H8sing1.09Å1.10Å
C3'BR2sing1.97Å1.82Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4C5C6120.0°120.0°
C5C4C3120.0°120.0°
C5C4H2120.0°120.1°
C4C5H3120.0°120.0°
C5C6C1120.1°120.0°
C6C5H3120.0°119.9°
C5C6H4120.0°120.1°
C4C3C3'119.6°120.0°
C4C3C2120.1°119.9°
C3C4H2120.0°119.9°
C6C1C2119.9°120.0°
C6C1C1'120.1°120.0°
C1C6H4119.9°120.0°
C3'C3C2120.3°120.0°
C3C3'H7106.2°109.4°
C3C3'H8106.2°109.5°
C3C3'BR2122.3°109.5°
C3C2C1120.0°120.1°
C3C2H1120.0°119.9°
C2C1C1'120.1°120.0°
C1C2H1120.0°120.0°
C1C1'BR1103.5°109.4°
C1C1'H5110.9°109.5°
C1C1'H6111.0°109.5°
BR1C1'H5111.0°109.4°
BR1C1'H6110.9°109.5°
H5C1'H6109.5°109.5°
H7C3'H8109.5°109.5°
H7C3'BR2106.2°109.5°
H8C3'BR2106.2°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4C5C6H3180.0°179.7°
C5C4C3H2180.0°179.9°
C4C5C6C10.1°0.6°
C5C4C3C3'179.8°180.0°
C5C4C3C20.1°0.0°
C4C5C6H4179.9°180.0°
C6C5C4C30.2°0.3°
C5C6C1H4180.0°179.4°
C5C6C1C20.0°0.6°
C5C6C1C1'179.6°179.7°
C6C5C4H2179.8°179.7°
C4C3C3'C2179.9°180.0°
C4C3C2C10.0°0.1°
C4C3C2H1180.0°179.9°
C3C4C5H3179.8°180.0°
C4C3C3'H7152.2°30.0°
C4C3C3'H835.7°150.0°
C4C3C3'BR286.0°90.0°
C6C1C2C30.1°0.4°
C6C1C2C1'179.6°179.7°
C6C1C1'BR1104.9°90.3°
C6C1C2H1179.9°179.8°
C1C6C5H3179.8°179.7°
C6C1C1'H514.2°29.6°
C6C1C1'H6136.1°149.7°
C3'C3C2C1179.9°180.0°
C3'C3C2H10.1°0.1°
C3'C3C4H20.2°0.1°
C3C3'H7H8114.3°120.0°
C3C3'H7BR2131.6°120.0°
C3C3'H8BR2131.6°120.0°
C3C2C1H1180.0°179.9°
C3C2C1C1'179.7°180.0°
C2C3C4H2179.9°180.0°
C2C3C3'H727.9°150.0°
C2C3C3'H8144.4°30.1°
C2C3C3'BR293.8°90.0°
C2C1C1'BR174.7°90.1°
C2C1C6H4180.0°180.0°
C2C1C1'H5166.2°150.0°
C2C1C1'H644.3°29.9°
C1C1'BR1H5119.0°120.0°
C1C1'BR1H6119.0°120.0°
C1'C1C2H10.3°0.1°
C1'C1C6H40.4°0.3°
C1C1'H5H6122.8°120.1°
BR1C1'H5H6122.8°120.0°
H2C4C5H30.2°0.0°
H3C5C6H40.2°0.3°
H7C3'H8BR2114.2°120.0°

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PDB entries from 2024-08-07

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