Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C29N28sing1.47Å1.47Å
N28C30sing1.47Å1.47Å
N28C27sing1.47Å1.47Å
C27C24sing1.51Å1.52Å
C26C25doub1.38Å1.39ÅAromatic
C26C21sing1.39Å1.39ÅAromatic
C25C24sing1.38Å1.39ÅAromatic
C24C23doub1.38Å1.40ÅAromatic
C23C22sing1.38Å1.39ÅAromatic
C22C21doub1.39Å1.40ÅAromatic
C21O12sing1.36Å1.37Å
O12C11sing1.43Å1.42Å
C11C08sing1.51Å1.51Å
C10C09sing1.40Å1.39ÅAromatic
C10C05doub1.42Å1.40ÅAromatic
C10N01sing1.34Å1.36ÅAromatic
C09C08doub1.36Å1.39ÅAromatic
C08C07sing1.39Å1.39ÅAromatic
C07C06doub1.36Å1.39ÅAromatic
C06C05sing1.40Å1.39ÅAromatic
C05C04sing1.41Å1.38ÅAromatic
C04C03doub1.36Å1.38ÅAromatic
C03C02sing1.40Å1.39ÅAromatic
C02N02sing1.39Å1.35Å
C02N01doub1.32Å1.35ÅAromatic
C29H291sing1.09Å1.10Å
C29H292sing1.09Å1.10Å
C29H293sing1.09Å1.10Å
C30H301sing1.09Å1.10Å
C30H302sing1.09Å1.10Å
C30H303sing1.09Å1.10Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
C26H26sing1.08Å1.08Å
C25H25sing1.08Å1.08Å
C23H23sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C09H09sing1.08Å1.08Å
C07H07sing1.08Å1.08Å
C06H06sing1.08Å1.08Å
C04H04sing1.08Å1.08Å
C03H03sing1.08Å1.08Å
N02H021sing0.97Å1.00Å
N02H022sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C29N28C30109.0°111.0°
C29N28C27109.4°111.0°
N28C29H291109.5°109.5°
N28C29H292109.4°109.5°
N28C29H293109.5°109.5°
C30N28C27109.7°111.0°
N28C30H301109.5°109.5°
N28C30H302109.5°109.5°
N28C30H303109.4°109.5°
N28C27C24112.9°109.5°
N28C27H271108.6°109.4°
N28C27H272108.6°109.5°
C27C24C25118.2°120.0°
C27C24C23121.8°119.9°
C24C27H271108.6°109.5°
C24C27H272108.6°109.5°
C25C26C21119.8°120.0°
C26C25C24120.2°120.0°
C25C26H26120.1°120.0°
C26C25H25119.9°120.0°
C26C21C22120.3°119.9°
C26C21O12119.5°120.0°
C21C26H26120.1°120.0°
C25C24C23120.0°120.1°
C24C25H25119.9°120.0°
C24C23C22119.9°120.1°
C24C23H23120.1°120.0°
C23C22C21119.8°119.9°
C22C23H23120.1°120.0°
C23C22H22120.1°120.0°
C22C21O12120.2°120.0°
C21C22H22120.1°120.1°
C21O12C11120.0°117.0°
O12C11C08108.3°109.5°
O12C11H111109.8°109.5°
O12C11H112109.7°109.4°
C11C08C09120.7°119.5°
C11C08C07118.8°119.5°
C08C11H111109.8°109.5°
C08C11H112109.8°109.5°
C09C10C05119.0°119.1°
C09C10N01120.3°121.0°
C10C09C08120.0°119.8°
C10C09H09120.0°120.1°
C05C10N01120.7°119.9°
C10C05C06120.6°119.6°
C10C05C04120.1°119.1°
C10N01C02119.9°121.2°
C09C08C07120.6°121.0°
C08C09H09120.0°120.1°
C08C07C06119.7°120.8°
C08C07H07120.2°119.6°
C07C06C05120.2°119.7°
C06C07H07120.2°119.6°
C07C06H06119.9°120.1°
C06C05C04119.3°121.3°
C05C06H06119.9°120.2°
C05C04C03117.8°118.3°
C05C04H04121.1°120.8°
C04C03C02121.3°119.9°
C03C04H04121.1°120.9°
C04C03H03119.4°120.1°
C03C02N02118.5°119.3°
C03C02N01120.1°121.6°
C02C03H03119.4°120.1°
N02C02N01121.4°119.2°
C02N02H021109.5°120.0°
C02N02H022109.5°120.1°
H291C29H292109.4°109.5°
H291C29H293109.5°109.4°
H292C29H293109.5°109.5°
H301C30H302109.4°109.5°
H301C30H303109.5°109.5°
H302C30H303109.5°109.5°
H271C27H272109.5°109.4°
H111C11H112109.5°109.4°
H021N02H022109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C29N28C30C27119.7°124.0°
C29N28C27C24137.9°170.0°
N28C29H291H292120.0°120.0°
N28C29H291H293120.0°120.0°
N28C29H292H293120.0°120.0°
C29N28C30H301180.0°60.0°
C29N28C30H30260.0°180.0°
C29N28C30H30360.0°60.0°
C29N28C27H271101.6°70.0°
C29N28C27H27217.4°49.9°
C30N28C27C24102.6°66.0°
C30N28C29H291180.0°56.0°
C30N28C29H29260.0°176.0°
C30N28C29H29360.0°63.9°
N28C30H301H302120.0°120.0°
N28C30H301H303120.0°120.0°
N28C30H302H303120.0°120.0°
C30N28C27H27117.9°54.0°
C30N28C27H272136.9°173.9°
N28C27C24H271120.5°120.0°
N28C27C24H272120.5°120.1°
N28C27C24C25152.5°90.0°
N28C27C24C2327.3°90.1°
C27N28C29H29160.0°180.0°
C27N28C29H29260.0°60.0°
C27N28C29H293179.9°60.1°
C27N28C30H30160.3°63.9°
C27N28C30H302179.7°56.0°
C27N28C30H30359.7°176.0°
N28C27H271H272118.4°120.0°
C27C24C25C26179.9°180.0°
C27C24C25C23179.9°180.0°
C27C24C23C22179.7°180.0°
C24C27H271H272118.5°120.1°
C27C24C25H250.0°0.1°
C27C24C23H230.3°0.1°
C25C26C21H26180.0°179.7°
C26C25C24H25180.0°180.0°
C26C25C24C230.1°0.0°
C25C26C21C220.1°0.0°
C25C26C21O12179.8°180.0°
C21C26C25C240.2°0.0°
C26C21C22C230.2°0.1°
C26C21C22O12179.8°180.0°
C26C21O12C117.2°180.0°
C21C26C25H25179.8°180.0°
C26C21C22H22179.9°179.9°
C25C24C23C220.2°0.0°
C25C24C27H27187.0°30.0°
C25C24C27H27232.0°150.0°
C24C25C26H26179.8°179.7°
C25C24C23H23179.8°180.0°
C24C23C22H23180.0°179.9°
C24C23C22C210.3°0.1°
C23C24C27H27193.2°150.0°
C23C24C27H272147.8°30.0°
C23C24C25H25179.9°180.0°
C24C23C22H22179.8°179.9°
C23C22C21H22180.0°179.9°
C23C22C21O12179.6°180.0°
C22C21O12C11173.0°0.1°
C22C21C26H26179.9°179.7°
C21C22C23H23179.7°180.0°
C21O12C11C08178.7°180.0°
O12C21C26H260.2°0.3°
O12C21C22H220.4°0.1°
C21O12C11H11158.9°60.0°
C21O12C11H11261.5°60.0°
O12C11C08H111119.8°120.1°
O12C11C08H112119.8°120.0°
O12C11C08C0956.5°90.0°
O12C11C08C07123.6°90.0°
O12C11H111H112120.5°120.0°
C11C08C09C10179.8°180.0°
C11C08C09C07179.8°180.0°
C11C08C07C06179.9°180.0°
C08C11H111H112120.5°120.0°
C11C08C09H090.2°0.1°
C11C08C07H070.1°0.0°
C09C10C05N01179.8°179.6°
C10C09C08H09180.0°179.9°
C10C09C08C070.4°0.0°
C09C10C05C060.1°0.1°
C09C10C05C04179.8°180.0°
C09C10N01C02179.8°179.7°
C05C10C09C080.2°0.0°
C10C05C06C070.0°0.0°
C10C05C06C04179.7°180.0°
C10C05C04C030.2°0.0°
C05C10N01C020.0°0.7°
C05C10C09H09179.8°180.0°
C10C05C06H06180.0°180.0°
C10C05C04H04179.8°179.9°
N01C10C09C08179.9°179.7°
N01C10C05C06179.9°179.7°
N01C10C05C040.4°0.3°
C10N01C02C030.9°0.7°
C10N01C02N02179.8°179.7°
N01C10C09H090.1°0.4°
C09C08C07C060.3°0.1°
C09C08C11H111176.4°30.1°
C09C08C11H11263.3°150.0°
C09C08C07H07179.7°180.0°
C08C07C06H07180.0°180.0°
C08C07C06C050.1°0.0°
C07C08C11H1113.8°149.9°
C07C08C11H112116.6°29.9°
C07C08C09H09179.6°179.9°
C08C07C06H06179.8°180.0°
C07C06C05H06180.0°180.0°
C07C06C05C04179.8°180.0°
C06C05C04C03179.5°180.0°
C05C06C07H07179.9°180.0°
C06C05C04H040.5°0.1°
C05C04C03H04180.0°179.9°
C05C04C03C021.1°0.0°
C04C05C06H060.2°0.0°
C05C04C03H03178.9°180.0°
C04C03C02H03180.0°179.9°
C04C03C02N02179.2°180.0°
C04C03C02N011.5°0.4°
C03C02N02N01179.3°179.6°
C02C03C04H04178.9°179.9°
C03C02N02H021179.3°0.1°
C03C02N02H02259.3°180.0°
N02C02C03H030.8°0.1°
C02N02H021H022120.0°179.9°
N01C02C03H03178.5°179.7°
N01C02N02H0210.0°179.7°
N01C02N02H022120.0°0.4°
H291C29H292H293120.0°120.0°
H301C30H302H303120.0°120.1°
H26C26C25H250.2°0.3°
H23C23C22H220.2°0.2°
H07C07C06H060.1°0.0°
H04C04C03H031.1°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon