Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8SY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2C7sing1.40Å1.37Å
C8C7doub1.39Å1.41ÅAromatic
C8C9sing1.38Å1.36ÅAromatic
C7C6sing1.39Å1.39ÅAromatic
C9C10doub1.39Å1.40ÅAromatic
C6C5doub1.38Å1.39ÅAromatic
C10C5sing1.39Å1.41ÅAromatic
C10N1sing1.40Å1.42Å
C5C4sing1.51Å1.50Å
C1N1sing1.47Å1.47Å
N1C2sing1.35Å1.37Å
C4C3sing1.53Å1.50Å
C2C3sing1.51Å1.50Å
C2O1doub1.21Å1.22Å
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C6H3sing1.08Å1.08Å
C8H4sing1.08Å1.08Å
C1H5sing1.09Å1.10Å
C1H6sing1.09Å1.10Å
C1H7sing1.09Å1.10Å
C3H8sing1.09Å1.10Å
C3H9sing1.09Å1.10Å
C9H10sing1.08Å1.08Å
N2H11sing0.97Å1.00Å
N2H12sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2C7C8119.6°120.0°
N2C7C6120.3°120.0°
C7N2H11109.5°120.0°
C7N2H12109.5°120.0°
C7C8C9120.1°120.0°
C8C7C6120.1°120.0°
C7C8H4120.0°120.0°
C8C9C10120.3°120.0°
C9C8H4120.0°120.0°
C8C9H10119.8°120.0°
C7C6C5119.9°119.9°
C7C6H3120.1°120.1°
C9C10C5120.0°120.0°
C9C10N1120.3°120.1°
C10C9H10119.8°120.0°
C6C5C10119.6°120.0°
C6C5C4120.8°120.1°
C5C6H3120.0°120.0°
C5C10N1119.7°119.9°
C10C5C4119.6°119.9°
C10N1C1119.7°119.8°
C10N1C2119.3°120.4°
C5C4C3108.3°109.5°
C5C4H1109.8°109.4°
C5C4H2109.8°109.5°
C1N1C2121.0°119.7°
N1C1H5109.5°109.5°
N1C1H6109.5°109.5°
N1C1H7109.5°109.4°
N1C2C3118.7°120.8°
N1C2O1121.2°119.6°
C4C3C2109.3°109.9°
C3C4H1109.8°109.4°
C3C4H2109.8°109.5°
C4C3H8109.5°109.4°
C4C3H9109.5°109.4°
C3C2O1120.0°119.6°
C2C3H8109.5°109.4°
C2C3H9109.5°109.4°
H1C4H2109.5°109.5°
H5C1H6109.5°109.6°
H5C1H7109.5°109.5°
H6C1H7109.5°109.5°
H8C3H9109.5°109.3°
H11N2H12109.5°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2C7C8C6179.8°180.0°
N2C7C8C9179.6°180.0°
N2C7C6C5179.8°180.0°
N2C7C6H30.2°0.1°
N2C7C8H40.4°0.0°
C7N2H11H12120.0°179.9°
C7C8C9H4180.0°179.9°
C7C8C9C101.0°0.1°
C8C7C6C50.0°0.1°
C8C7C6H3180.0°179.9°
C7C8C9H10179.1°179.9°
C8C7N2H11180.0°179.9°
C8C7N2H1260.0°0.0°
C9C8C7C60.6°0.1°
C8C9C10H10180.0°179.9°
C8C9C10C50.8°0.1°
C8C9C10N1179.4°180.0°
C7C6C5H3180.0°179.9°
C7C6C5C100.2°0.1°
C7C6C5C4179.5°180.0°
C6C7C8H4179.4°180.0°
C6C7N2H110.2°0.0°
C6C7N2H12120.2°179.9°
C9C10C5C60.2°0.1°
C9C10C5N1179.8°179.9°
C9C10C5C4179.1°180.0°
C9C10N1C112.8°18.7°
C9C10N1C2166.3°161.5°
C10C9C8H4179.0°180.0°
C6C5C10C4179.3°180.0°
C6C5C10N1180.0°180.0°
C6C5C4C3144.8°146.0°
C6C5C4H195.4°94.0°
C6C5C4H225.0°26.0°
C5C10N1C1167.0°161.2°
C5C10N1C213.9°18.5°
C10C5C4C336.0°33.9°
C10C5C4H183.8°86.0°
C10C5C4H2155.8°154.0°
C10C5C6H3179.8°179.9°
C5C10C9H10179.2°179.9°
N1C10C5C40.7°0.0°
C10N1C1C2179.1°179.8°
C10N1C2C39.8°0.8°
C10N1C2O1172.5°179.2°
C10N1C1H5180.0°179.7°
C10N1C1H660.0°60.2°
C10N1C1H760.0°59.7°
N1C10C9H100.5°0.1°
C5C4C3H1119.8°120.0°
C5C4C3H2119.8°120.1°
C5C4C3C255.5°48.6°
C5C4H1H2120.6°120.0°
C4C5C6H30.5°0.1°
C5C4C3H8175.5°168.8°
C5C4C3H964.4°71.5°
C1N1C2C3169.3°179.4°
C1N1C2O18.5°0.6°
N1C1H5H6120.0°120.0°
N1C1H5H7120.0°119.9°
N1C1H6H7120.0°119.9°
N1C2C3C445.7°35.3°
N1C2C3O1177.8°180.0°
C2N1C1H51.0°0.1°
C2N1C1H6119.1°120.0°
C2N1C1H7120.9°120.0°
N1C2C3H8165.7°155.4°
N1C2C3H974.3°84.9°
C4C3C2H8120.0°120.1°
C4C3C2H9120.0°120.1°
C4C3C2O1136.5°144.8°
C3C4H1H2120.6°120.0°
C4C3H8H9120.1°119.7°
C2C3C4H164.3°71.3°
C2C3C4H2175.4°168.7°
C2C3H8H9120.0°119.8°
O1C2C3H816.5°24.7°
O1C2C3H9103.5°95.1°
H1C4C3H855.7°48.8°
H1C4C3H9175.8°168.5°
H2C4C3H864.7°71.1°
H2C4C3H955.4°48.6°
H4C8C9H101.0°0.1°
H5C1H6H7120.0°120.0°

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon