8S0

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O1	C1	doub	1.21Å	1.23Å
C1	O5	sing	1.35Å	1.36Å
C1	C2	sing	1.51Å	1.44Å
O2	C2	sing	1.43Å	1.45Å
O5	C5	sing	1.45Å	1.47Å
C2	C3	sing	1.53Å	1.52Å
O6	C6	sing	1.43Å	1.41Å
C5	C6	sing	1.53Å	1.51Å
C5	C4	sing	1.53Å	1.49Å
C3	C4	sing	1.53Å	1.50Å
C3	O3	sing	1.43Å	1.42Å
C4	O4	sing	1.43Å	1.46Å
C2	H2	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
C4	H4	sing	1.09Å	1.10Å
C5	H5	sing	1.09Å	1.10Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
O2	HO2	sing	0.97Å	0.95Å
O3	HO3	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å
O6	HO6	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	O5	120.3°	121.0°
O1	C1	C2	121.1°	120.9°
O5	C1	C2	118.1°	118.1°
C1	O5	C5	119.9°	115.7°
C1	C2	O2	112.8°	109.7°
C1	C2	C3	114.1°	108.4°
C1	C2	H2	108.1°	109.6°
O2	C2	C3	106.6°	109.7°
O2	C2	H2	107.9°	109.7°
C2	O2	HO2	109.5°	114.0°
O5	C5	C6	101.9°	109.5°
O5	C5	C4	113.0°	109.1°
O5	C5	H5	111.0°	109.6°
C2	C3	C4	109.2°	109.0°
C2	C3	O3	107.3°	109.5°
C3	C2	H2	107.1°	109.7°
C2	C3	H3	109.8°	109.6°
O6	C6	C5	106.3°	109.4°
O6	C6	H61	110.3°	109.5°
O6	C6	H62	110.3°	109.5°
C6	O6	HO6	109.5°	114.0°
C6	C5	C4	109.2°	109.5°
C6	C5	H5	110.6°	109.5°
C5	C6	H61	110.3°	109.5°
C5	C6	H62	110.2°	109.4°
C5	C4	C3	108.1°	109.3°
C5	C4	O4	110.5°	109.5°
C5	C4	H4	108.8°	109.5°
C4	C5	H5	110.8°	109.5°
C4	C3	O3	109.1°	109.5°
C3	C4	O4	111.6°	109.4°
C4	C3	H3	110.1°	109.6°
C3	C4	H4	108.6°	109.5°
O3	C3	H3	111.3°	109.6°
C3	O3	HO3	109.5°	114.0°
O4	C4	H4	109.2°	109.5°
C4	O4	HO4	109.5°	114.0°
H61	C6	H62	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	O5	C2	172.3°	179.8°
O1	C1	C2	O2	29.9°	11.1°
O1	C1	O5	C5	157.8°	129.5°
O1	C1	C2	C3	151.7°	130.9°
O1	C1	C2	H2	89.3°	109.4°
O5	C1	C2	O2	157.8°	169.1°
O5	C1	C2	C3	36.0°	49.3°
C1	O5	C5	C6	156.3°	173.1°
C1	O5	C5	C4	39.3°	53.2°
O5	C1	C2	H2	82.9°	70.4°
C1	O5	C5	H5	85.9°	66.7°
C1	C2	O2	C3	125.9°	118.9°
C1	C2	O2	H2	119.3°	120.5°
C2	C1	O5	C5	29.9°	50.7°
C1	C2	C3	H2	119.5°	119.7°
C1	C2	C3	C4	51.5°	52.6°
C1	C2	C3	O3	169.6°	172.4°
C1	C2	C3	H3	69.3°	67.3°
C1	C2	O2	HO2	13.0°	60.0°
O2	C2	C3	H2	115.3°	120.6°
O2	C2	C3	C4	176.6°	172.4°
O2	C2	C3	O3	65.2°	67.8°
O2	C2	C3	H3	55.8°	52.5°
O5	C5	C6	O6	78.7°	65.4°
O5	C5	C6	C4	119.7°	119.6°
O5	C5	C6	H5	118.1°	120.3°
O5	C5	C4	H5	125.3°	120.0°
O5	C5	C4	C3	53.5°	58.0°
O5	C5	C4	O4	175.9°	177.9°
O5	C5	C4	H4	64.3°	62.0°
O5	C5	C6	H61	161.8°	54.7°
O5	C5	C6	H62	40.8°	174.7°
C2	C3	C4	C5	59.7°	60.0°
C2	C3	C4	O3	117.0°	119.8°
C2	C3	C4	H3	120.6°	119.9°
C2	C3	O3	H3	120.1°	120.2°
C2	C3	C4	O4	178.6°	179.9°
C2	C3	C4	H4	58.3°	60.0°
C3	C2	O2	HO2	139.0°	178.9°
C2	C3	O3	HO3	180.0°	60.0°
O6	C6	C5	H61	119.5°	120.0°
O6	C6	C5	H62	119.5°	120.0°
O6	C6	C5	C4	161.6°	175.0°
O6	C6	C5	H5	39.5°	54.9°
O6	C6	H61	H62	121.5°	120.0°
C6	C5	C4	H5	122.0°	120.1°
C6	C5	C4	C3	166.2°	177.9°
C6	C5	C4	O4	71.4°	62.2°
C6	C5	C4	H4	48.4°	57.9°
C5	C6	H61	H62	121.5°	120.0°
C5	C6	O6	HO6	180.0°	180.0°
C5	C4	C3	O4	121.7°	119.9°
C5	C4	C3	H4	117.9°	120.0°
C5	C4	C3	O3	176.6°	179.8°
C5	C4	O4	H4	119.6°	120.1°
C5	C4	C3	H3	61.0°	59.9°
C4	C5	C6	H61	42.1°	65.0°
C4	C5	C6	H62	78.9°	55.0°
C5	C4	O4	HO4	180.0°	179.9°
C4	C3	O3	H3	121.7°	120.3°
C3	C4	O4	H4	120.1°	120.1°
C4	C3	C2	H2	68.0°	67.0°
C3	C4	C5	H5	71.8°	62.0°
C4	C3	O3	HO3	61.9°	179.4°
C3	C4	O4	HO4	59.7°	60.1°
O3	C3	C4	O4	61.7°	60.3°
O3	C3	C2	H2	50.1°	52.8°
O3	C3	C4	H4	58.7°	59.8°
O4	C4	C3	H3	60.7°	60.0°
O4	C4	C5	H5	50.6°	57.9°
H2	C2	C3	H3	171.2°	173.1°
H2	C2	O2	HO2	106.3°	60.5°
H3	C3	C4	H4	178.9°	179.9°
H3	C3	O3	HO3	59.8°	60.3°
H4	C4	C5	H5	170.4°	178.0°
H4	C4	O4	HO4	60.4°	60.0°
H5	C5	C6	H61	80.0°	174.9°
H5	C5	C6	H62	158.9°	65.1°
H61	C6	O6	HO6	60.5°	59.9°
H62	C6	O6	HO6	60.5°	60.1°

Release date:	2018-05-23
Definition date:	2017-09-07
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	5YAP