8QN
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.46Å | |
| CG2 | CB | sing | 1.53Å | 1.53Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.50Å | |
| CB | OG1 | sing | 1.43Å | 1.45Å | |
| O3P | C | sing | 1.34Å | 1.45Å | |
| O3P | P10 | sing | 1.61Å | 1.59Å | |
| C | O | doub | 1.21Å | 1.22Å | |
| O1P | P10 | doub | 1.48Å | 1.51Å | |
| O2P | P10 | sing | 1.61Å | 1.51Å | |
| P10 | O5' | sing | 1.61Å | 1.61Å | |
| O5' | C5' | sing | 1.43Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| N7 | C8 | doub | 1.30Å | 1.35Å | Aromatic |
| N7 | C5 | sing | 1.35Å | 1.34Å | Aromatic |
| C8 | N9 | sing | 1.36Å | 1.34Å | Aromatic |
| O4' | C4' | sing | 1.44Å | 1.42Å | |
| O4' | C1' | sing | 1.44Å | 1.43Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| N6 | C6 | sing | 1.38Å | 1.35Å | |
| C5 | C6 | doub | 1.41Å | 1.48Å | Aromatic |
| C5 | C4 | sing | 1.41Å | 1.48Å | Aromatic |
| N9 | C1' | sing | 1.47Å | 1.49Å | |
| N9 | C4 | sing | 1.37Å | 1.33Å | Aromatic |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.54Å | 1.52Å | |
| C1' | C2' | sing | 1.55Å | 1.52Å | |
| C6 | N1 | sing | 1.33Å | 1.34Å | Aromatic |
| C4 | N3 | doub | 1.33Å | 1.35Å | Aromatic |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| N1 | C2 | doub | 1.32Å | 1.35Å | Aromatic |
| N3 | C2 | sing | 1.32Å | 1.35Å | Aromatic |
| O2P | H1 | sing | 0.97Å | 0.95Å | |
| CA | H2 | sing | 1.09Å | 1.10Å | |
| N | H3 | sing | 1.01Å | 1.00Å | |
| N | H4 | sing | 1.01Å | 1.00Å | |
| CB | H6 | sing | 1.09Å | 1.10Å | |
| OG1 | H7 | sing | 0.97Å | 0.95Å | |
| CG2 | H8 | sing | 1.09Å | 1.10Å | |
| CG2 | H9 | sing | 1.09Å | 1.10Å | |
| CG2 | H10 | sing | 1.09Å | 1.10Å | |
| C5' | H11 | sing | 1.09Å | 1.10Å | |
| C5' | H12 | sing | 1.09Å | 1.10Å | |
| C4' | H13 | sing | 1.09Å | 1.10Å | |
| C3' | H14 | sing | 1.09Å | 1.10Å | |
| O3' | H15 | sing | 0.97Å | 0.95Å | |
| C2' | H16 | sing | 1.09Å | 1.10Å | |
| O2' | H17 | sing | 0.97Å | 0.95Å | |
| C1' | H18 | sing | 1.09Å | 1.10Å | |
| C8 | H19 | sing | 1.08Å | 1.08Å | |
| C2 | H20 | sing | 1.08Å | 1.08Å | |
| N6 | H21 | sing | 0.97Å | 1.00Å | |
| N6 | H22 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N | CA | CB | 112.0° | 109.5° |
| N | CA | C | 111.4° | 109.5° |
| N | CA | H2 | 109.3° | 109.5° |
| CA | N | H3 | 109.5° | 111.0° |
| CA | N | H4 | 109.5° | 111.1° |
| CG2 | CB | CA | 111.5° | 109.5° |
| CG2 | CB | OG1 | 112.2° | 109.5° |
| CG2 | CB | H6 | 106.7° | 109.5° |
| CB | CG2 | H8 | 109.5° | 109.5° |
| CB | CG2 | H9 | 109.5° | 109.5° |
| CB | CG2 | H10 | 109.5° | 109.5° |
| CB | CA | C | 107.1° | 109.5° |
| CA | CB | OG1 | 111.6° | 109.5° |
| CB | CA | H2 | 108.3° | 109.5° |
| CA | CB | H6 | 106.7° | 109.5° |
| CA | C | O3P | 121.2° | 120.0° |
| CA | C | O | 120.7° | 120.0° |
| C | CA | H2 | 108.7° | 109.5° |
| OG1 | CB | H6 | 107.8° | 109.5° |
| CB | OG1 | H7 | 109.5° | 114.0° |
| C | O3P | P10 | 115.9° | 117.0° |
| O3P | C | O | 118.1° | 120.0° |
| O3P | P10 | O1P | 109.5° | 109.5° |
| O3P | P10 | O2P | 107.6° | 109.5° |
| O3P | P10 | O5' | 101.3° | 109.5° |
| O1P | P10 | O2P | 120.6° | 109.4° |
| O1P | P10 | O5' | 109.0° | 109.5° |
| O2P | P10 | O5' | 107.2° | 109.5° |
| P10 | O2P | H1 | 109.5° | 113.9° |
| P10 | O5' | C5' | 122.9° | 123.0° |
| O5' | C5' | C4' | 105.4° | 109.4° |
| O5' | C5' | H11 | 110.5° | 109.5° |
| O5' | C5' | H12 | 110.5° | 109.5° |
| C5' | C4' | O4' | 110.6° | 110.4° |
| C5' | C4' | C3' | 114.2° | 110.4° |
| C4' | C5' | H11 | 110.5° | 109.4° |
| C4' | C5' | H12 | 110.5° | 109.5° |
| C5' | C4' | H13 | 108.3° | 110.3° |
| C8 | N7 | C5 | 107.5° | 109.5° |
| N7 | C8 | N9 | 111.9° | 110.0° |
| N7 | C8 | H19 | 124.1° | 125.0° |
| N7 | C5 | C6 | 134.9° | 134.7° |
| N7 | C5 | C4 | 106.4° | 107.1° |
| C8 | N9 | C1' | 124.9° | 126.3° |
| C8 | N9 | C4 | 108.2° | 107.4° |
| N9 | C8 | H19 | 124.1° | 125.0° |
| C4' | O4' | C1' | 108.3° | 105.3° |
| O4' | C4' | C3' | 106.0° | 104.8° |
| O4' | C4' | H13 | 109.5° | 110.5° |
| O4' | C1' | N9 | 108.7° | 110.5° |
| O4' | C1' | C2' | 108.4° | 104.7° |
| O4' | C1' | H18 | 109.2° | 110.4° |
| C4' | C3' | O3' | 109.7° | 110.6° |
| C4' | C3' | C2' | 104.0° | 104.1° |
| C3' | C4' | H13 | 108.2° | 110.3° |
| C4' | C3' | H14 | 110.4° | 110.5° |
| N6 | C6 | C5 | 121.1° | 120.7° |
| N6 | C6 | N1 | 121.7° | 120.8° |
| C6 | N6 | H21 | 109.5° | 120.1° |
| C6 | N6 | H22 | 109.5° | 120.0° |
| C6 | C5 | C4 | 118.7° | 118.1° |
| C5 | C6 | N1 | 117.2° | 118.5° |
| C5 | C4 | N9 | 106.0° | 106.0° |
| C5 | C4 | N3 | 118.1° | 119.1° |
| C1' | N9 | C4 | 126.9° | 126.3° |
| N9 | C1' | C2' | 113.9° | 110.3° |
| N9 | C1' | H18 | 108.5° | 110.3° |
| N9 | C4 | N3 | 135.9° | 134.9° |
| O3' | C3' | C2' | 110.3° | 110.5° |
| O3' | C3' | H14 | 111.7° | 110.5° |
| C3' | O3' | H15 | 109.5° | 114.1° |
| C3' | C2' | C1' | 104.4° | 104.1° |
| C3' | C2' | O2' | 110.5° | 110.5° |
| C2' | C3' | H14 | 110.5° | 110.6° |
| C3' | C2' | H16 | 110.9° | 110.6° |
| C1' | C2' | O2' | 107.3° | 110.5° |
| C1' | C2' | H16 | 110.9° | 110.6° |
| C2' | C1' | H18 | 108.1° | 110.3° |
| C6 | N1 | C2 | 120.8° | 121.2° |
| C4 | N3 | C2 | 119.2° | 120.6° |
| O2' | C2' | H16 | 112.5° | 110.4° |
| C2' | O2' | H17 | 109.5° | 114.0° |
| N1 | C2 | N3 | 125.9° | 122.5° |
| N1 | C2 | H20 | 117.0° | 118.8° |
| N3 | C2 | H20 | 117.1° | 118.8° |
| H3 | N | H4 | 109.5° | 110.9° |
| H8 | CG2 | H9 | 109.4° | 109.5° |
| H8 | CG2 | H10 | 109.5° | 109.5° |
| H9 | CG2 | H10 | 109.5° | 109.4° |
| H11 | C5' | H12 | 109.5° | 109.5° |
| H21 | N6 | H22 | 109.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N | CA | CB | CG2 | 87.0° | 55.0° |
| N | CA | CB | C | 122.3° | 120.0° |
| N | CA | CB | H2 | 120.6° | 120.0° |
| N | CA | C | H2 | 120.5° | 120.0° |
| N | CA | CB | OG1 | 39.4° | 65.0° |
| N | CA | C | O3P | 47.7° | 160.0° |
| N | CA | C | O | 133.2° | 20.0° |
| CA | N | H3 | H4 | 120.0° | 124.0° |
| N | CA | CB | H6 | 156.9° | 175.0° |
| CG2 | CB | CA | OG1 | 126.3° | 120.0° |
| CG2 | CB | CA | H6 | 116.2° | 120.0° |
| CG2 | CB | CA | C | 150.7° | 175.0° |
| CG2 | CB | OG1 | H6 | 117.2° | 120.0° |
| CG2 | CB | CA | H2 | 33.6° | 65.0° |
| CG2 | CB | OG1 | H7 | 180.0° | 60.0° |
| CB | CG2 | H8 | H9 | 120.0° | 120.0° |
| CB | CG2 | H8 | H10 | 120.0° | 120.0° |
| CB | CG2 | H9 | H10 | 120.0° | 120.0° |
| CB | CA | C | H2 | 116.8° | 120.0° |
| CA | CB | OG1 | H6 | 116.9° | 120.0° |
| CB | CA | C | O3P | 170.5° | 80.0° |
| CB | CA | C | O | 10.5° | 100.0° |
| CB | CA | N | H3 | 180.0° | 176.1° |
| CB | CA | N | H4 | 60.0° | 60.0° |
| CA | CB | OG1 | H7 | 54.0° | 180.0° |
| CA | CB | CG2 | H8 | 180.0° | 60.0° |
| CA | CB | CG2 | H9 | 60.0° | 60.0° |
| CA | CB | CG2 | H10 | 60.0° | 179.9° |
| C | CA | CB | OG1 | 83.0° | 55.0° |
| CA | C | O3P | O | 179.1° | 180.0° |
| CA | C | O3P | P10 | 144.9° | 180.0° |
| C | CA | N | H3 | 60.2° | 63.9° |
| C | CA | N | H4 | 59.9° | 60.0° |
| C | CA | CB | H6 | 34.5° | 65.0° |
| OG1 | CB | CA | H2 | 159.9° | 175.0° |
| OG1 | CB | CG2 | H8 | 54.0° | 180.0° |
| OG1 | CB | CG2 | H9 | 174.0° | 60.0° |
| OG1 | CB | CG2 | H10 | 66.0° | 59.9° |
| C | O3P | P10 | O1P | 176.5° | 54.9° |
| C | O3P | P10 | O2P | 43.8° | 65.0° |
| C | O3P | P10 | O5' | 68.5° | 175.0° |
| O3P | C | CA | H2 | 72.7° | 40.0° |
| P10 | O3P | C | O | 34.2° | 0.0° |
| O3P | P10 | O1P | O2P | 125.5° | 120.0° |
| O3P | P10 | O1P | O5' | 109.9° | 120.0° |
| O3P | P10 | O2P | O5' | 108.2° | 120.0° |
| O3P | P10 | O5' | C5' | 48.3° | 175.0° |
| O3P | P10 | O2P | H1 | 126.4° | 60.0° |
| O | C | CA | H2 | 106.3° | 140.0° |
| O1P | P10 | O2P | O5' | 125.4° | 120.0° |
| O1P | P10 | O5' | C5' | 67.1° | 55.0° |
| O1P | P10 | O2P | H1 | 0.0° | 180.0° |
| O2P | P10 | O5' | C5' | 160.9° | 65.0° |
| P10 | O5' | C5' | C4' | 169.1° | 180.0° |
| O5' | P10 | O2P | H1 | 125.4° | 60.0° |
| P10 | O5' | C5' | H11 | 49.8° | 60.1° |
| P10 | O5' | C5' | H12 | 71.5° | 60.0° |
| O5' | C5' | C4' | H11 | 119.4° | 119.9° |
| O5' | C5' | C4' | H12 | 119.3° | 120.0° |
| O5' | C5' | C4' | O4' | 70.7° | 69.6° |
| O5' | C5' | C4' | C3' | 169.9° | 175.0° |
| O5' | C5' | H11 | H12 | 121.9° | 120.0° |
| O5' | C5' | C4' | H13 | 49.3° | 52.8° |
| C5' | C4' | O4' | C3' | 124.3° | 118.8° |
| C5' | C4' | O4' | H13 | 119.2° | 122.3° |
| C5' | C4' | O4' | C1' | 153.0° | 159.4° |
| C5' | C4' | C3' | H13 | 120.6° | 122.2° |
| C5' | C4' | C3' | O3' | 90.4° | 98.5° |
| C5' | C4' | C3' | C2' | 151.6° | 142.8° |
| C4' | C5' | H11 | H12 | 121.9° | 120.0° |
| C5' | C4' | C3' | H14 | 33.2° | 24.1° |
| N7 | C8 | N9 | H19 | 180.0° | 179.6° |
| C8 | N7 | C5 | C6 | 179.8° | 179.7° |
| C8 | N7 | C5 | C4 | 0.3° | 0.2° |
| N7 | C8 | N9 | C1' | 178.0° | 179.9° |
| N7 | C8 | N9 | C4 | 0.4° | 0.5° |
| C5 | N7 | C8 | N9 | 0.0° | 0.4° |
| N7 | C5 | C6 | N6 | 0.8° | 0.0° |
| N7 | C5 | C6 | C4 | 179.9° | 179.9° |
| N7 | C5 | C4 | N9 | 0.6° | 0.1° |
| N7 | C5 | C6 | N1 | 179.5° | 180.0° |
| N7 | C5 | C4 | N3 | 179.6° | 180.0° |
| C5 | N7 | C8 | H19 | 180.0° | 180.0° |
| C8 | N9 | C1' | O4' | 1.5° | 20.0° |
| C8 | N9 | C4 | C5 | 0.6° | 0.3° |
| C8 | N9 | C1' | C4 | 177.2° | 179.6° |
| C8 | N9 | C1' | C2' | 119.4° | 95.3° |
| C8 | N9 | C4 | N3 | 179.3° | 179.8° |
| C8 | N9 | C1' | H18 | 120.2° | 142.5° |
| O4' | C4' | C3' | H13 | 117.4° | 119.0° |
| C4' | O4' | C1' | N9 | 140.4° | 159.4° |
| O4' | C4' | C3' | O3' | 147.7° | 142.6° |
| O4' | C4' | C3' | C2' | 29.7° | 24.0° |
| C4' | O4' | C1' | C2' | 16.1° | 40.6° |
| O4' | C4' | C5' | H11 | 48.7° | 50.3° |
| O4' | C4' | C5' | H12 | 169.9° | 170.3° |
| O4' | C4' | C3' | H14 | 88.8° | 94.8° |
| C4' | O4' | C1' | H18 | 101.4° | 78.2° |
| C1' | O4' | C4' | C3' | 28.7° | 40.5° |
| O4' | C1' | N9 | C2' | 120.9° | 115.4° |
| O4' | C1' | N9 | H18 | 118.7° | 122.4° |
| O4' | C1' | N9 | C4 | 175.6° | 159.6° |
| O4' | C1' | C2' | C3' | 3.0° | 24.0° |
| O4' | C1' | C2' | H18 | 118.2° | 118.9° |
| O4' | C1' | C2' | O2' | 114.3° | 142.7° |
| C1' | O4' | C4' | H13 | 87.8° | 78.3° |
| O4' | C1' | C2' | H16 | 122.5° | 94.8° |
| C4' | C3' | O3' | C2' | 113.9° | 114.7° |
| C4' | C3' | O3' | H14 | 122.8° | 122.6° |
| C4' | C3' | C2' | H14 | 118.4° | 118.6° |
| C4' | C3' | C2' | C1' | 19.3° | 0.0° |
| C4' | C3' | C2' | O2' | 95.7° | 118.7° |
| C3' | C4' | C5' | H11 | 70.8° | 65.1° |
| C3' | C4' | C5' | H12 | 50.5° | 55.0° |
| C4' | C3' | O3' | H15 | 180.0° | 180.0° |
| C4' | C3' | C2' | H16 | 138.9° | 118.8° |
| N6 | C6 | C5 | N1 | 179.7° | 180.0° |
| N6 | C6 | C5 | C4 | 179.1° | 180.0° |
| N6 | C6 | N1 | C2 | 179.5° | 180.0° |
| C6 | N6 | H21 | H22 | 120.0° | 179.9° |
| C6 | C5 | C4 | N9 | 179.5° | 180.0° |
| C6 | C5 | C4 | N3 | 0.5° | 0.1° |
| C5 | C6 | N1 | C2 | 0.2° | 0.1° |
| C5 | C6 | N6 | H21 | 179.6° | 0.0° |
| C5 | C6 | N6 | H22 | 59.7° | 180.0° |
| C5 | C4 | N9 | C1' | 178.1° | 180.0° |
| C5 | C4 | N9 | N3 | 178.8° | 179.9° |
| C4 | C5 | C6 | N1 | 0.6° | 0.1° |
| C5 | C4 | N3 | C2 | 0.0° | 0.1° |
| N9 | C1' | C2' | C3' | 118.1° | 143.0° |
| N9 | C1' | C2' | H18 | 120.7° | 122.2° |
| C1' | N9 | C4 | N3 | 3.1° | 0.1° |
| N9 | C1' | C2' | O2' | 124.6° | 98.4° |
| N9 | C1' | C2' | H16 | 1.4° | 24.2° |
| C1' | N9 | C8 | H19 | 2.0° | 0.3° |
| C4 | N9 | C1' | C2' | 63.5° | 85.1° |
| N9 | C4 | N3 | C2 | 178.7° | 180.0° |
| C4 | N9 | C1' | H18 | 57.0° | 37.1° |
| C4 | N9 | C8 | H19 | 179.6° | 179.9° |
| O3' | C3' | C2' | H14 | 124.0° | 122.6° |
| O3' | C3' | C2' | C1' | 136.9° | 118.7° |
| O3' | C3' | C2' | O2' | 21.8° | 0.0° |
| O3' | C3' | C4' | H13 | 30.3° | 23.7° |
| O3' | C3' | C2' | H16 | 103.6° | 122.5° |
| C3' | C2' | C1' | O2' | 117.3° | 118.6° |
| C3' | C2' | C1' | H16 | 119.5° | 118.8° |
| C3' | C2' | O2' | H16 | 124.5° | 122.6° |
| C2' | C3' | C4' | H13 | 87.7° | 95.0° |
| C2' | C3' | O3' | H15 | 66.1° | 65.3° |
| C3' | C2' | O2' | H17 | 180.0° | 61.5° |
| C3' | C2' | C1' | H18 | 121.2° | 94.8° |
| C1' | C2' | O2' | H16 | 122.2° | 122.7° |
| C1' | C2' | C3' | H14 | 99.1° | 118.7° |
| C1' | C2' | O2' | H17 | 66.7° | 176.1° |
| C6 | N1 | C2 | N3 | 0.3° | 0.1° |
| C6 | N1 | C2 | H20 | 179.7° | 180.0° |
| N1 | C6 | N6 | H21 | 0.0° | 180.0° |
| N1 | C6 | N6 | H22 | 120.0° | 0.1° |
| C4 | N3 | C2 | N1 | 0.4° | 0.1° |
| C4 | N3 | C2 | H20 | 179.6° | 180.0° |
| O2' | C2' | C3' | H14 | 145.8° | 122.7° |
| O2' | C2' | C1' | H18 | 3.9° | 23.8° |
| N1 | C2 | N3 | H20 | 180.0° | 179.9° |
| H2 | CA | N | H3 | 60.0° | 56.1° |
| H2 | CA | N | H4 | 180.0° | 180.0° |
| H2 | CA | CB | H6 | 82.6° | 55.0° |
| H6 | CB | OG1 | H7 | 62.9° | 60.0° |
| H6 | CB | CG2 | H8 | 63.8° | 60.0° |
| H6 | CB | CG2 | H9 | 56.2° | 180.0° |
| H6 | CB | CG2 | H10 | 176.2° | 60.0° |
| H8 | CG2 | H9 | H10 | 120.0° | 120.0° |
| H11 | C5' | C4' | H13 | 168.6° | 172.8° |
| H12 | C5' | C4' | H13 | 70.1° | 67.2° |
| H13 | C4' | C3' | H14 | 153.8° | 146.3° |
| H14 | C3' | O3' | H15 | 57.2° | 57.4° |
| H14 | C3' | C2' | H16 | 20.4° | 0.1° |
| H16 | C2' | O2' | H17 | 55.5° | 61.2° |
| H16 | C2' | C1' | H18 | 119.3° | 146.4° |
