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8PY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C32C31doub1.39Å1.40ÅAromatic
C32C27sing1.39Å1.38ÅAromatic
C31C30sing1.39Å1.38ÅAromatic
C28C27doub1.39Å1.40ÅAromatic
C28C29sing1.40Å1.38ÅAromatic
C27C23sing1.47Å1.46ÅAromatic
C30C24doub1.39Å1.38ÅAromatic
C29C13doub1.39Å1.41ÅAromatic
C23C24sing1.47Å1.45ÅAromatic
C23C14doub1.31Å1.44ÅAromatic
C24C25sing1.39Å1.39ÅAromatic
C13C14sing1.47Å1.38ÅAromatic
C13C12sing1.39Å1.34ÅAromatic
C14C15sing1.47Å1.40ÅAromatic
C25C26doub1.40Å1.40ÅAromatic
C12C11doub1.39Å1.36ÅAromatic
C15C26sing1.39Å1.37ÅAromatic
C15C16doub1.39Å1.37ÅAromatic
C11C16sing1.39Å1.38ÅAromatic
C11N8sing1.36Å1.34Å
C9C7sing1.51Å1.50Å
C7N8sing1.35Å1.35Å
C7O10doub1.21Å1.23Å
N8C8sing1.39Å1.34Å
N7C8doub1.31Å1.33ÅAromatic
N7C5sing1.36Å1.34ÅAromatic
O6C6doub1.22Å1.26Å
C8N9sing1.37Å1.33ÅAromatic
C5C6sing1.41Å1.47Å
C5C4doub1.40Å1.48ÅAromatic
C6N1sing1.35Å1.33Å
N9C4sing1.37Å1.33ÅAromatic
N9C1'sing1.47Å1.49Å
C4N3sing1.34Å1.35Å
N1C2sing1.36Å1.34Å
C1'C2'sing1.55Å1.52Å
C1'O4'sing1.45Å1.44Å
C2'C3'sing1.55Å1.51Å
N3C2doub1.31Å1.33Å
C2N2sing1.37Å1.32Å
O4'C4'sing1.44Å1.41Å
C3'C4'sing1.54Å1.51Å
C3'O3'sing1.43Å1.44Å
C4'C5'sing1.53Å1.53Å
O5'C5'sing1.43Å1.42Å
O5'Psing1.61Å1.61Å
POP2sing1.61Å1.52Å
POP1doub1.48Å1.52Å
C5'H2sing1.09Å1.10Å
C5'H3sing1.09Å1.10Å
C4'H4sing1.09Å1.10Å
C3'H5sing1.09Å1.10Å
O3'H6sing0.97Å0.95Å
C2'H7sing1.09Å1.10Å
C2'H8sing1.09Å1.10Å
C1'H9sing1.09Å1.10Å
N2H10sing0.97Å1.00Å
N2H11sing0.97Å1.00Å
N1H12sing0.97Å1.00Å
OP2H13sing0.97Å0.95Å
C9H14sing1.09Å1.10Å
C9H15sing1.09Å1.10Å
C9H16sing1.09Å1.10Å
C12H17sing1.08Å1.08Å
C16H18sing1.08Å1.08Å
C25H19sing1.08Å1.08Å
C26H20sing1.08Å1.08Å
C28H21sing1.08Å1.08Å
C29H22sing1.08Å1.08Å
C30H23sing1.08Å1.08Å
C31H24sing1.08Å1.08Å
C32H25sing1.08Å1.08Å
PO1sing1.61Å68.22Å
O1H1sing0.97Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C31C32C27120.4°120.6°
C32C31C30122.6°122.8°
C32C31H24118.7°118.6°
C31C32H25119.8°119.7°
C32C27C28122.4°122.1°
C32C27C23116.8°118.4°
C27C32H25119.8°119.7°
C31C30C24121.2°120.7°
C31C30H23119.4°119.7°
C30C31H24118.7°118.6°
C27C28C29118.8°120.1°
C28C27C23120.8°119.5°
C27C28H21120.6°119.9°
C28C29C13119.7°120.2°
C29C28H21120.6°120.0°
C28C29H22120.1°119.9°
C27C23C24122.2°119.2°
C27C23C14120.2°120.3°
C30C24C23116.8°118.3°
C30C24C25124.3°122.2°
C24C30H23119.4°119.7°
C29C13C14126.0°119.4°
C29C13C12118.9°122.2°
C13C29H22120.1°119.9°
C24C23C14117.6°120.4°
C23C24C25118.9°119.5°
C23C14C13114.5°120.4°
C23C14C15120.1°120.4°
C24C25C26122.5°120.2°
C24C25H19118.7°119.9°
C14C13C12115.1°118.4°
C13C14C15125.5°119.2°
C13C12C11119.8°120.6°
C13C12H17120.1°119.7°
C14C15C26121.5°119.5°
C14C15C16118.6°118.3°
C25C26C15119.4°120.2°
C26C25H19118.7°120.0°
C25C26H20120.3°119.9°
C12C11C16127.0°122.8°
C12C11N8108.6°118.5°
C11C12H17120.1°119.7°
C26C15C16119.9°122.2°
C15C26H20120.3°119.9°
C15C16C11114.1°120.7°
C15C16H18123.0°119.7°
C16C11N8124.3°118.7°
C11C16H18123.0°119.7°
C11N8C7116.5°120.0°
C11N8C8119.2°120.0°
C9C7N8116.8°120.0°
C9C7O10120.5°120.0°
C7C9H14109.5°109.5°
C7C9H15109.4°109.4°
C7C9H16109.5°109.5°
N8C7O10122.7°120.0°
C7N8C8123.8°120.0°
N8C8N7113.2°125.2°
N8C8N9128.1°125.2°
C8N7C5102.0°109.3°
N7C8N9118.5°109.6°
N7C5C6132.1°134.0°
N7C5C4108.9°107.4°
O6C6C5120.6°120.8°
O6C6N1124.6°120.9°
C8N9C4104.1°107.5°
C8N9C1'133.2°126.3°
C6C5C4119.0°118.6°
C5C6N1114.8°118.3°
C5C4N9106.5°106.2°
C5C4N3120.0°119.7°
C6N1C2122.9°120.4°
C6N1H12118.5°119.8°
C4N9C1'122.4°126.2°
N9C4N3133.4°134.1°
N9C1'C2'102.4°110.4°
N9C1'O4'119.5°110.4°
N9C1'H9110.3°110.4°
C4N3C2116.3°121.2°
N1C2N3126.9°121.8°
N1C2N2116.5°119.1°
C2N1H12118.6°119.8°
C2'C1'O4'102.7°104.9°
C1'C2'C3'105.9°104.0°
C1'C2'H7110.4°110.5°
C1'C2'H8110.4°110.6°
C2'C1'H9109.9°110.4°
C1'O4'C4'107.0°105.2°
O4'C1'H9111.1°110.3°
C2'C3'C4'103.8°104.1°
C2'C3'O3'113.2°110.5°
C2'C3'H5108.7°110.6°
C3'C2'H7110.4°110.5°
C3'C2'H8110.3°110.5°
N3C2N2116.6°119.0°
C2N2H10120.0°120.1°
C2N2H11120.0°119.9°
O4'C4'C3'103.8°104.9°
O4'C4'C5'115.0°110.4°
O4'C4'H4110.4°110.4°
C4'C3'O3'112.5°110.5°
C3'C4'C5'109.5°110.4°
C3'C4'H4109.1°110.4°
C4'C3'H5108.7°110.5°
O3'C3'H5109.6°110.5°
C3'O3'H6109.5°114.0°
C4'C5'O5'109.4°109.4°
C4'C5'H2109.5°109.5°
C4'C5'H3109.5°109.5°
C5'C4'H4108.9°110.3°
C5'O5'P116.5°123.0°
O5'C5'H2109.5°109.4°
O5'C5'H3109.5°109.5°
O5'POP2112.8°109.5°
O5'POP1112.1°109.5°
O5'PO195.5°109.5°
OP2POP1111.6°109.5°
POP2H13109.5°114.1°
OP2PO138.4°109.4°
OP1PO189.3°109.5°
H2C5'H3109.5°109.5°
H7C2'H8109.5°110.5°
H10N2H11120.0°120.0°
H14C9H15109.5°109.4°
H14C9H16109.5°109.5°
H15C9H16109.5°109.5°
PO1H190.0°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C31C32C27H25180.0°180.0°
C32C31C30H24180.0°180.0°
C31C32C27C28179.4°180.0°
C31C32C27C230.8°0.0°
C32C31C30C240.2°0.1°
C32C31C30H23179.8°180.0°
C27C32C31C300.4°0.0°
C32C27C28C23178.6°180.0°
C32C27C28C29179.5°179.9°
C32C27C23C241.1°0.0°
C32C27C23C14179.7°179.9°
C32C27C28H210.5°0.0°
C27C32C31H24179.6°180.0°
C31C30C24H23180.0°179.9°
C31C30C24C230.5°0.1°
C31C30C24C25179.5°180.0°
C30C31C32H25179.6°180.0°
C27C28C29H21180.0°179.9°
C27C28C29C130.4°0.0°
C28C27C23C24179.8°180.0°
C28C27C23C141.0°0.1°
C27C28C29H22179.6°179.9°
C28C27C32H250.6°0.0°
C29C28C27C231.0°0.1°
C28C29C13H22180.0°180.0°
C28C29C13C140.2°0.0°
C28C29C13C12179.3°180.0°
C27C23C24C301.0°0.1°
C27C23C24C14179.2°179.9°
C27C23C24C25179.1°180.0°
C27C23C14C130.4°0.0°
C27C23C14C15178.9°180.0°
C23C27C28H21179.0°180.0°
C23C27C32H25179.2°180.0°
C30C24C23C25179.9°179.9°
C30C24C23C14179.8°179.9°
C30C24C25C26179.7°180.0°
C30C24C25H190.3°0.1°
C24C30C31H24179.7°180.0°
C29C13C14C230.2°0.0°
C29C13C14C12179.6°180.0°
C29C13C14C15179.4°180.0°
C29C13C12C11179.5°180.0°
C29C13C12H170.5°0.0°
C13C29C28H21179.6°180.0°
C24C23C14C13179.7°180.0°
C24C23C14C150.4°0.0°
C23C24C25C260.2°0.1°
C23C24C25H19179.8°180.0°
C23C24C30H23179.5°180.0°
C14C23C24C250.1°0.0°
C23C14C13C15179.2°180.0°
C23C14C13C12179.4°180.0°
C23C14C15C260.7°0.1°
C23C14C15C16179.7°180.0°
C24C25C26H19180.0°180.0°
C24C25C26C150.5°0.2°
C24C25C26H20179.5°179.9°
C25C24C30H230.5°0.1°
C14C13C12C110.1°0.1°
C13C14C15C26179.9°180.0°
C13C14C15C160.5°0.0°
C14C13C12H17179.9°180.0°
C14C13C29H22179.8°180.0°
C12C13C14C150.1°0.0°
C13C12C11H17180.0°180.0°
C13C12C11C160.5°0.1°
C13C12C11N8177.8°179.7°
C12C13C29H220.7°0.0°
C14C15C26C250.8°0.2°
C14C15C26C16179.6°179.9°
C14C15C16C110.7°0.0°
C14C15C16H18179.3°179.7°
C14C15C26H20179.2°179.9°
C25C26C15H20180.0°179.9°
C25C26C15C16179.6°179.9°
C12C11C16C150.8°0.0°
C12C11C16N8176.9°179.7°
C12C11N8C769.3°110.2°
C12C11N8C8103.6°69.9°
C12C11C16H18179.2°179.7°
C26C15C16C11179.6°180.0°
C26C15C16H180.4°0.2°
C15C26C25H19179.5°179.9°
C15C16C11H18180.0°179.7°
C15C16C11N8177.7°179.7°
C16C15C26H200.4°0.0°
C16C11N8C7108.1°70.2°
C16C11N8C879.0°109.8°
C16C11C12H17179.5°180.0°
C11N8C7C918.6°172.5°
C11N8C7C8172.6°179.9°
C11N8C7O10160.6°7.4°
C11N8C8N773.1°82.4°
C11N8C8N9112.8°98.2°
N8C11C12H172.2°0.3°
N8C11C16H182.3°0.0°
C9C7N8O10179.2°180.0°
C9C7N8C8168.9°7.5°
C7C9H14H15120.0°119.9°
C7C9H14H16120.0°120.0°
C7C9H15H16120.0°120.0°
C7N8C8N799.3°97.7°
C7N8C8N974.8°81.8°
N8C7C9H14179.2°84.2°
N8C7C9H1559.2°155.9°
N8C7C9H1660.8°35.9°
O10C7N8C811.9°172.5°
O10C7C9H140.0°95.7°
O10C7C9H15120.0°24.2°
O10C7C9H16120.0°144.2°
N8C8N7N9174.7°179.5°
N8C8N7C5177.8°180.0°
N8C8N9C4177.7°180.0°
N8C8N9C1'9.0°0.3°
C8N7C5C6179.9°179.7°
C8N7C5C41.0°0.3°
N7C8N9C43.8°0.5°
N7C8N9C1'177.1°179.9°
N7C5C6O60.3°0.0°
C5N7C8N93.0°0.5°
N7C5C6C4179.0°180.0°
N7C5C6N1179.1°179.9°
N7C5C4N91.1°0.0°
N7C5C4N3179.6°179.9°
O6C6C5N1178.8°179.9°
O6C6C5C4178.7°180.0°
O6C6N1C2178.4°179.9°
O6C6N1H121.5°0.0°
C8N9C4C52.7°0.3°
C8N9C4C1'174.2°179.7°
C8N9C4N3179.1°179.8°
C8N9C1'C2'127.1°115.4°
C8N9C1'O4'120.4°129.1°
C8N9C1'H910.2°6.9°
C6C5C4N9178.1°180.0°
C6C5C4N30.4°0.1°
C5C6N1C20.3°0.1°
C5C6N1H12179.7°179.9°
C4C5C6N10.1°0.1°
C5C4N9N3178.2°179.9°
C5C4N9C1'176.9°180.0°
C5C4N3C20.9°0.0°
C6N1C2H12180.0°180.0°
C6N1C2N30.9°0.0°
C6N1C2N2178.9°179.9°
C4N9C1'C2'45.2°64.2°
C4N9C1'O4'67.3°51.2°
N9C4N3C2177.1°179.9°
C4N9C1'H9162.1°173.5°
C1'N9C4N34.9°0.1°
N9C1'C2'O4'124.5°118.9°
N9C1'C2'H9117.2°122.3°
N9C1'O4'H9130.3°122.3°
N9C1'C2'C3'144.0°142.8°
N9C1'O4'C4'150.8°159.3°
N9C1'C2'H796.5°24.2°
N9C1'C2'H824.6°98.5°
C4N3C2N11.2°0.0°
C4N3C2N2179.2°180.0°
N1C2N3N2178.0°179.9°
N1C2N2H10178.2°180.0°
N1C2N2H111.8°0.1°
C2'C1'O4'H9117.4°118.8°
C1'C2'C3'H7119.5°118.6°
C1'C2'C3'H8119.4°118.8°
C2'C1'O4'C4'38.5°40.4°
C1'C2'C3'C4'4.4°0.0°
C1'C2'C3'O3'126.7°118.6°
C1'C2'C3'H5111.2°118.7°
C1'C2'H7H8121.6°122.8°
O4'C1'C2'C3'19.5°23.9°
C1'O4'C4'C3'42.0°40.4°
C1'O4'C4'C5'161.5°159.3°
C1'O4'C4'H474.8°78.5°
O4'C1'C2'H7138.9°94.7°
O4'C1'C2'H8100.0°142.6°
C2'C3'C4'O4'27.3°23.9°
C2'C3'C4'O3'122.8°118.7°
C2'C3'C4'H5115.6°118.8°
C2'C3'O3'H5121.6°122.8°
C2'C3'C4'C5'150.6°142.8°
C2'C3'C4'H490.4°95.0°
C2'C3'O3'H6180.0°65.4°
C3'C2'H7H8121.6°122.6°
C3'C2'C1'H998.8°94.9°
N3C2N2H100.0°0.0°
N3C2N2H11180.0°180.0°
N3C2N1H12179.1°180.0°
C2N2H10H11180.0°179.9°
N2C2N1H121.1°0.1°
O4'C4'C3'C5'123.3°118.9°
O4'C4'C3'H4117.7°118.9°
O4'C4'C3'O3'150.1°142.6°
O4'C4'C5'H4124.5°122.3°
O4'C4'C5'O5'37.8°68.0°
O4'C4'C5'H2157.8°52.0°
O4'C4'C5'H382.2°172.1°
O4'C4'C3'H588.3°94.9°
C4'O4'C1'H979.0°78.4°
C4'C3'O3'H5121.1°122.6°
C3'C4'C5'H4119.1°122.3°
C3'C4'C5'O5'154.1°176.6°
C3'C4'C5'H285.9°63.5°
C3'C4'C5'H334.1°56.6°
C4'C3'O3'H662.7°180.0°
C4'C3'C2'H7115.0°118.6°
C4'C3'C2'H8123.9°118.8°
O3'C3'C4'C5'86.6°98.5°
O3'C3'C4'H432.4°23.7°
O3'C3'C2'H77.3°122.7°
O3'C3'C2'H8113.8°0.2°
C4'C5'O5'H2120.0°120.0°
C4'C5'O5'H3120.0°120.0°
C4'C5'O5'P133.2°180.0°
C4'C5'H2H3120.1°120.1°
C5'C4'C3'H535.0°24.0°
C5'O5'POP236.7°65.0°
C5'O5'POP190.2°55.0°
O5'C5'H2H3120.0°120.0°
O5'C5'C4'H486.8°54.3°
C5'O5'PO11.2°175.0°
O5'POP2OP1127.2°120.0°
O5'POP2O168.6°120.0°
O5'POP1O195.6°120.0°
PO5'C5'H2106.8°60.0°
PO5'C5'H313.3°60.0°
O5'POP2H13127.2°60.0°
O5'PO1H190.0°180.0°
OP2POP1O132.0°120.0°
OP2PO1H190.0°60.0°
OP1POP2H130.0°180.0°
OP1PO1H190.0°60.0°
H2C5'C4'H433.2°174.2°
H3C5'C4'H4153.3°65.7°
H4C4'C3'H5154.0°146.3°
H5C3'O3'H658.4°57.4°
H5C3'C2'H7129.4°0.1°
H5C3'C2'H88.3°122.5°
H7C2'C1'H920.6°146.5°
H8C2'C1'H9141.7°23.8°
H13OP2PO158.6°60.0°
H14C9H15H16120.0°120.1°
H19C25C26H200.6°0.0°
H21C28C29H220.4°0.0°
H23C30C31H240.3°0.1°
H24C31C32H250.4°0.0°

222624

PDB entries from 2024-07-17

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