Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8N5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
SC6sing1.82Å1.81Å
SC7sing1.76Å1.74Å
C6C4sing1.51Å1.50Å
OC9doub1.22Å1.24Å
C7C9sing1.40Å1.46Å
C7C8doub1.37Å1.38Å
C9N1sing1.35Å1.36Å
C4C5doub1.39Å1.39ÅAromatic
C4C3sing1.39Å1.41ÅAromatic
C5Csing1.38Å1.38ÅAromatic
C8C3sing1.47Å1.45Å
C8Nsing1.37Å1.35Å
N1Nsing1.40Å1.39Å
C3C2doub1.40Å1.39ÅAromatic
CC1doub1.38Å1.37ÅAromatic
C2C1sing1.38Å1.38ÅAromatic
C5H1sing1.08Å1.08Å
C6H2sing1.09Å1.10Å
C6H3sing1.09Å1.10Å
N1H4sing0.97Å1.00Å
C2H6sing1.08Å1.08Å
C1H7sing1.08Å1.08Å
CH8sing1.08Å1.08Å
NH5sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6SC7102.9°101.3°
SC6C4116.9°111.2°
SC6H2107.6°109.2°
SC6H3107.6°109.1°
SC7C9131.4°129.7°
SC7C8120.1°121.8°
C6C4C5117.1°117.6°
C6C4C3124.1°123.5°
C4C6H2107.6°109.1°
C4C6H3107.6°109.1°
OC9C7132.4°126.2°
OC9N1123.4°126.2°
C9C7C8108.4°108.5°
C7C9N1104.2°107.6°
C7C8C3129.7°122.7°
C7C8N107.9°107.6°
C9N1N110.6°108.3°
C9N1H4124.7°125.8°
C5C4C3118.7°118.9°
C4C5C121.0°120.8°
C4C5H1119.5°119.5°
C4C3C8118.2°121.4°
C4C3C2119.5°120.0°
C5CC1120.0°120.3°
CC5H1119.5°119.7°
C5CH8120.0°119.8°
C3C8N122.2°129.7°
C8C3C2122.3°118.7°
C8NN1108.9°108.0°
C8NH5109.6°126.0°
NN1H4124.7°125.9°
N1NH5109.6°126.0°
C3C2C1120.6°120.2°
C3C2H6119.7°119.9°
CC1C2120.2°119.7°
CC1H7119.9°120.1°
C1CH8120.0°119.9°
C1C2H6119.7°119.9°
C2C1H7119.9°120.1°
H2C6H3109.4°109.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
SC6C4H2121.1°120.5°
SC6C4H3121.1°120.3°
C6SC7C9164.1°150.7°
C6SC7C818.6°28.8°
SC6C4C5156.9°144.2°
SC6C4C326.5°37.2°
SC6H2H3116.6°119.1°
C7SC6C430.8°44.6°
SC7C9O1.9°0.9°
SC7C9C8177.6°179.5°
SC7C9N1177.2°179.2°
SC7C8C31.7°1.1°
SC7C8N177.4°179.1°
C7SC6H290.2°75.8°
C7SC6H3151.9°165.0°
C6C4C5C3176.8°178.7°
C6C4C5C176.4°177.7°
C6C4C3C83.5°3.3°
C6C4C3C2175.2°177.2°
C6C4C5H13.5°2.2°
C4C6H2H3116.6°119.2°
OC9C7N1179.1°179.9°
OC9C7C8179.5°179.5°
OC9N1N179.3°179.9°
OC9N1H40.7°0.2°
C9C7C8C3176.2°179.3°
C9C7C8N0.6°0.5°
C7C9N1N0.0°0.0°
C7C9N1H4179.9°179.9°
C8C7C9N10.4°0.3°
C7C8C3C412.8°19.2°
C7C8C3N175.1°179.8°
C7C8NN10.5°0.5°
C7C8C3C2168.6°160.3°
C7C8NH5120.4°179.4°
C9N1NC80.3°0.3°
C9N1NH4180.0°179.9°
C9N1NH5120.2°179.6°
C4C5CH1180.0°180.0°
C5C4C3C8179.9°178.1°
C5C4C3C21.4°1.3°
C4C5CC10.6°0.0°
C5C4C6H282.0°95.4°
C5C4C6H335.8°23.8°
C4C5CH8179.4°180.0°
C3C4C5C0.3°0.9°
C4C3C8C2178.6°179.5°
C4C3C8N172.1°161.0°
C4C3C2C11.5°0.9°
C3C4C5H1179.7°179.1°
C3C4C6H294.6°83.2°
C3C4C6H3147.6°157.6°
C4C3C2H6178.5°179.1°
C5CC1H8180.0°180.0°
C5CC1C20.5°0.5°
C5CC1H7179.5°179.5°
C3C8NN1176.6°179.3°
C8C3C2C1179.9°178.6°
C8C3C2H60.1°1.4°
C3C8NH563.5°0.7°
C8NN1H5119.9°179.9°
NC8C3C26.5°19.5°
C8NN1H4179.7°179.8°
C3C2C1C0.6°0.1°
C3C2C1H6180.0°180.0°
C3C2C1H7179.4°180.0°
CC1C2H7180.0°179.9°
C1CC5H1179.4°180.0°
CC1C2H6179.5°179.9°
C2C1CH8179.5°179.4°
H1C5CH80.6°0.1°
H4N1NH559.8°0.3°
H6C2C1H70.5°0.0°
H7C1CH80.5°0.5°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon