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8ML

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OF1CF1sing1.43Å1.43Å
N4'C4'sing1.39Å1.32Å
N3'C4'doub1.33Å1.37ÅAromatic
N3'C2'sing1.32Å1.32ÅAromatic
CM2C2'sing1.51Å1.46Å
O2APAdoub1.48Å1.46Å
CF1CF2sing1.53Å1.49Å
O3BPBdoub1.48Å1.44Å
O3APBsing1.61Å1.59Å
O3APAsing1.61Å1.61Å
O2BPBsing1.61Å1.43Å
C4'C5'sing1.40Å1.45ÅAromatic
C2'N1'doub1.32Å1.36ÅAromatic
PBO1Bsing1.61Å1.57Å
PAO1Asing1.61Å1.46Å
PAO7sing1.61Å1.56Å
S1C2sing1.83Å1.73Å
S1C5sing1.84Å1.78Å
CF2OF2sing1.43Å1.39Å
CF2C2sing1.53Å1.56Å
CF2CF3sing1.53Å1.53Å
C2N3sing1.47Å1.39Å
C7O7sing1.43Å1.47Å
C7C6sing1.53Å1.40Å
OF4CF4sing1.43Å1.45Å
N1'C6'sing1.33Å1.37ÅAromatic
C5'C6'doub1.38Å1.37ÅAromatic
C5'C7'sing1.51Å1.48Å
C5C6sing1.53Å1.46Å
C5C4sing1.52Å1.37Å
OF3CF3sing1.43Å1.40Å
N3C7'sing1.47Å1.46Å
N3C4sing1.37Å1.42Å
CF3CF4sing1.53Å1.51Å
CF4CF5sing1.53Å1.52Å
C4CM4doub1.32Å1.43Å
CF5CF6sing1.53Å1.52Å
CF5OF5sing1.43Å1.41Å
CF6OF6sing1.43Å1.44Å
OF6PFsing1.61Å1.54Å
OF9PFdoub1.48Å1.50Å
OF7PFsing1.61Å1.49Å
PFOF8sing1.61Å1.54Å
O1AH1sing0.97Å0.95Å
O2BH2sing0.97Å0.95Å
O1BH3sing0.97Å0.95Å
C7H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
OF2H8sing0.97Å0.95Å
CF1H9sing1.09Å1.10Å
CF1H10sing1.09Å1.10Å
OF1H11sing0.97Å0.95Å
CF3H12sing1.09Å1.10Å
OF3H13sing0.97Å0.95Å
CF4H14sing1.09Å1.10Å
OF4H15sing0.97Å0.95Å
CF5H16sing1.09Å1.10Å
OF5H17sing0.97Å0.95Å
CF6H18sing1.09Å1.10Å
CF6H19sing1.09Å1.10Å
OF8H20sing0.97Å0.95Å
OF7H21sing0.97Å0.95Å
CM4H22sing1.08Å1.08Å
CM4H23sing1.08Å1.08Å
C7'H25sing1.09Å1.10Å
C7'H26sing1.09Å1.10Å
N4'H27sing0.97Å1.00Å
N4'H28sing0.97Å1.00Å
CM2H29sing1.09Å1.10Å
CM2H30sing1.09Å1.10Å
CM2H31sing1.09Å1.10Å
C6'H32sing1.08Å1.08Å
C5H33sing1.09Å1.10Å
C2H34sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OF1CF1CF2111.9°109.5°
OF1CF1H9108.8°109.5°
OF1CF1H10108.9°109.5°
CF1OF1H11109.5°114.0°
N4'C4'N3'116.5°120.5°
N4'C4'C5'122.1°120.5°
C4'N4'H27109.5°120.1°
C4'N4'H28109.5°119.9°
C4'N3'C2'119.3°120.7°
N3'C4'C5'121.3°119.0°
N3'C2'CM2121.3°119.1°
N3'C2'N1'121.5°121.9°
CM2C2'N1'117.3°119.1°
C2'CM2H29109.5°109.4°
C2'CM2H30109.5°109.4°
C2'CM2H31109.5°109.4°
O2APAO3A108.6°109.5°
O2APAO1A116.4°109.5°
O2APAO7110.3°109.4°
CF1CF2OF2111.6°109.5°
CF1CF2C2107.3°109.5°
CF1CF2CF3111.6°109.5°
CF2CF1H9108.9°109.5°
CF2CF1H10108.9°109.4°
O3BPBO3A106.8°109.5°
O3BPBO2B119.4°109.5°
O3BPBO1B107.4°109.4°
PBO3APA131.5°134.1°
O3APBO2B110.1°109.5°
O3APBO1B106.3°109.5°
O3APAO1A110.6°109.5°
O3APAO7102.4°109.5°
O2BPBO1B106.1°109.5°
PBO2BH2109.5°114.1°
C4'C5'C6'115.6°118.3°
C4'C5'C7'124.3°120.8°
C2'N1'C6'121.1°121.0°
PBO1BH3109.5°114.0°
O1APAO7107.6°109.5°
PAO1AH1109.5°114.0°
PAO7C7110.3°123.0°
C2S1C592.5°95.0°
S1C2CF2121.3°110.5°
S1C2N3109.3°104.4°
S1C2H3495.6°110.5°
S1C5C6120.3°111.0°
S1C5C4110.2°101.5°
S1C5H3394.8°111.1°
OF2CF2C2109.2°109.5°
OF2CF2CF3109.8°109.4°
CF2OF2H8109.5°114.0°
C2CF2CF3107.1°109.5°
CF2C2N3125.8°110.5°
CF2C2H3496.2°110.5°
CF2CF3OF3112.7°109.4°
CF2CF3CF4116.9°109.4°
CF2CF3H12105.5°109.5°
C2N3C7'124.4°121.5°
C2N3C4114.9°117.0°
N3C2H3497.0°110.4°
O7C7C6111.9°109.5°
O7C7H4108.8°109.5°
O7C7H5108.9°109.4°
C7C6C5113.9°109.5°
C6C7H4108.9°109.5°
C6C7H5108.9°109.4°
C7C6H6108.4°109.5°
C7C6H7108.3°109.4°
OF4CF4CF3107.8°109.5°
OF4CF4CF5109.4°109.4°
OF4CF4H14109.0°109.5°
CF4OF4H15109.5°114.0°
N1'C6'C5'121.1°119.2°
N1'C6'H32119.5°120.4°
C6'C5'C7'120.0°120.9°
C5'C6'H32119.5°120.4°
C5'C7'N3115.9°109.5°
C5'C7'H25107.8°109.5°
C5'C7'H26107.9°109.5°
C6C5C4126.5°111.0°
C5C6H6108.3°109.5°
C5C6H7108.3°109.5°
C6C5H3395.9°110.9°
C5C4N3112.4°113.8°
C5C4CM4125.3°123.1°
C4C5H3396.3°111.0°
OF3CF3CF4108.3°109.5°
OF3CF3H12106.9°109.5°
CF3OF3H13109.5°114.0°
C7'N3C4120.0°121.5°
N3C7'H25107.9°109.5°
N3C7'H26107.8°109.4°
N3C4CM4122.2°123.1°
CF3CF4CF5114.3°109.5°
CF4CF3H12105.8°109.5°
CF3CF4H14108.3°109.5°
CF4CF5CF6110.8°109.5°
CF4CF5OF5109.6°109.4°
CF5CF4H14108.1°109.4°
CF4CF5H16108.0°109.5°
C4CM4H22120.0°120.0°
C4CM4H23120.0°120.0°
CF6CF5OF5110.8°109.5°
CF5CF6OF6109.5°109.5°
CF6CF5H16108.1°109.5°
CF5CF6H18109.5°109.5°
CF5CF6H19109.4°109.5°
OF5CF5H16109.5°109.4°
CF5OF5H17109.5°114.0°
CF6OF6PF127.1°123.0°
OF6CF6H18109.5°109.5°
OF6CF6H19109.5°109.5°
OF6PFOF9107.0°109.4°
OF6PFOF7109.1°109.5°
OF6PFOF8105.5°109.5°
OF9PFOF7111.2°109.5°
OF9PFOF8112.0°109.5°
OF7PFOF8111.7°109.5°
PFOF7H21109.5°114.0°
PFOF8H20109.5°114.0°
H4C7H5109.5°109.4°
H6C6H7109.5°109.5°
H9CF1H10109.5°109.4°
H18CF6H19109.4°109.5°
H22CM4H23120.0°120.0°
H25C7'H26109.4°109.5°
H27N4'H28109.4°120.0°
H29CM2H30109.5°109.5°
H29CM2H31109.4°109.5°
H30CM2H31109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OF1CF1CF2H9120.3°120.1°
OF1CF1CF2H10120.4°120.0°
OF1CF1CF2OF252.0°171.2°
OF1CF1CF2C267.7°51.2°
OF1CF1CF2CF3175.3°68.8°
OF1CF1H9H10118.9°120.1°
N4'C4'N3'C5'179.0°179.9°
N4'C4'N3'C2'177.6°180.0°
N4'C4'C5'C6'179.5°180.0°
N4'C4'C5'C7'2.9°0.2°
C4'N4'H27H28120.0°180.0°
C4'N3'C2'CM2175.2°180.0°
C4'N3'C2'N1'3.8°0.0°
N3'C4'C5'C6'1.6°0.1°
N3'C4'C5'C7'178.2°179.7°
N3'C4'N4'H270.0°162.6°
N3'C4'N4'H28120.0°17.4°
N3'C2'CM2N1'179.1°179.9°
C2'N3'C4'C5'3.4°0.1°
N3'C2'N1'C6'2.4°0.1°
N3'C2'CM2H290.0°90.0°
N3'C2'CM2H30120.0°150.0°
N3'C2'CM2H31120.0°30.0°
CM2C2'N1'C6'176.6°180.0°
C2'CM2H29H30120.0°120.0°
C2'CM2H29H31120.0°119.9°
C2'CM2H30H31120.0°119.9°
O2APAO3APB152.9°40.1°
O2APAO3AO1A128.9°120.0°
O2APAO3AO7116.6°120.0°
O2APAO1AO7124.3°119.9°
O2APAO7C741.2°54.9°
O2APAO1AH10.0°180.0°
CF1CF2C2S142.1°160.4°
CF1CF2OF2C2118.5°120.0°
CF1CF2OF2CF3124.3°120.0°
CF1CF2C2CF3119.9°120.0°
CF1CF2C2N3161.6°84.6°
CF1CF2CF3OF342.6°60.7°
CF1CF2CF3CF483.9°59.3°
CF1CF2OF2H8180.0°180.0°
CF2CF1H9H10118.9°119.9°
CF2CF1OF1H11180.0°180.0°
CF1CF2CF3H12158.9°179.2°
CF1CF2C2H3458.3°37.8°
O3BPBO3AO2B131.0°120.0°
O3BPBO3AO1B114.5°120.0°
O3BPBO3APA169.1°45.0°
O3BPBO2BO1B121.4°119.9°
O3BPBO2BH20.0°59.9°
O3BPBO1BH30.0°180.0°
O3APBO2BO1B114.6°120.0°
PBO3APAO1A24.0°79.9°
PBO3APAO790.5°160.0°
O3APBO2BH2124.0°179.9°
O3APBO1BH3114.0°60.0°
PAO3APBO2B59.9°165.0°
PAO3APBO1B54.6°74.9°
O3APAO1AO7111.1°120.1°
O3APAO7C774.3°174.9°
O3APAO1AH1124.6°60.0°
O2BPBO1BH3128.8°60.0°
C4'C5'C6'N1'0.2°0.1°
C4'C5'C6'C7'176.8°179.8°
C4'C5'C7'N366.2°80.3°
C4'C5'C7'H2554.7°39.6°
C4'C5'C7'H26172.8°159.7°
C5'C4'N4'H27179.0°17.3°
C5'C4'N4'H2861.0°162.6°
C4'C5'C6'H32179.8°179.8°
C2'N1'C6'C5'0.5°0.1°
N1'C2'CM2H29179.1°90.0°
N1'C2'CM2H3060.9°30.1°
N1'C2'CM2H3159.1°150.1°
C2'N1'C6'H32179.4°179.8°
O1BPBO2BH2121.4°60.0°
O1APAO7C7169.2°65.0°
PAO7C7C6178.8°180.0°
O7PAO1AH1124.3°60.1°
PAO7C7H460.8°60.0°
PAO7C7H558.4°60.0°
S1C2CF2OF2163.3°79.6°
S1C2CF2N3156.3°115.0°
S1C2CF2H34100.5°122.5°
S1C2CF2CF377.8°40.3°
S1C2N3H3498.5°118.7°
C2S1C5C6162.8°142.0°
C2S1C5C41.1°23.9°
S1C2N3C7'162.0°177.7°
S1C2N3C48.2°2.4°
C2S1C5H3397.4°94.2°
C5S1C2CF2155.8°132.6°
C5S1C2N34.0°13.8°
S1C5C6C754.4°72.8°
S1C5C6C4158.6°112.1°
S1C5C6H3399.1°124.0°
S1C5C4H3397.5°118.1°
S1C5C4N35.8°30.0°
S1C5C4CM4177.6°150.0°
S1C5C6H6175.1°167.1°
S1C5C6H766.3°47.1°
C5S1C2H34103.4°104.9°
OF2CF2C2CF3118.9°119.9°
OF2CF2C2N340.4°35.4°
OF2CF2CF3OF3167.0°179.3°
OF2CF2CF3CF440.5°60.7°
OF2CF2CF1H9172.3°51.2°
OF2CF2CF1H1068.4°68.7°
OF2CF2CF3H1276.7°59.2°
OF2CF2C2H3462.8°157.8°
CF2C2N3H34102.9°122.5°
C2CF2CF3OF374.5°59.3°
CF2C2N3C7'39.3°63.5°
CF2C2N3C4150.4°116.4°
C2CF2CF3CF4159.0°179.3°
C2CF2OF2H861.5°60.0°
C2CF2CF1H952.6°68.8°
C2CF2CF1H10171.9°171.3°
C2CF2CF3H1241.8°60.7°
CF3CF2C2N378.5°155.3°
CF2CF3CF4OF471.1°74.4°
CF2CF3OF3CF4130.9°119.9°
CF2CF3OF3H12115.5°120.0°
CF2CF3CF4H12117.1°120.0°
CF2CF3CF4CF5167.1°165.7°
CF3CF2OF2H855.6°60.0°
CF3CF2CF1H964.4°171.1°
CF3CF2CF1H1054.9°51.2°
CF2CF3OF3H13180.0°67.3°
CF2CF3CF4H1446.7°45.7°
CF3CF2C2H34178.3°82.2°
C2N3C7'C5'96.6°82.9°
C2N3C4C59.4°22.6°
C2N3C7'C4169.8°179.9°
C2N3C4CM4173.9°157.4°
C2N3C7'H2524.3°157.1°
C2N3C7'H26142.4°37.1°
O7C7C6H4120.4°120.1°
O7C7C6H5120.4°120.0°
O7C7C6C5180.0°180.0°
O7C7H4H5118.9°120.0°
O7C7C6H659.4°59.9°
O7C7C6H759.3°60.0°
C7C6C5H6120.7°120.0°
C7C6C5H7120.7°120.0°
C7C6C5C4147.0°175.0°
C6C7H4H5118.9°119.9°
C7C6H6H7118.0°120.0°
C7C6C5H3344.7°51.2°
OF4CF4CF3OF357.5°45.5°
OF4CF4CF3CF5121.8°119.9°
OF4CF4CF3H14117.8°120.1°
OF4CF4CF5H14118.5°119.9°
OF4CF4CF5CF663.4°60.0°
OF4CF4CF5OF5174.1°180.0°
OF4CF4CF3H12171.8°165.6°
OF4CF4CF5H1654.8°60.0°
N1'C6'C5'H32180.0°179.7°
N1'C6'C5'C7'176.9°179.7°
C6'C5'C7'N3117.3°99.9°
C6'C5'C7'H25121.8°140.2°
C6'C5'C7'H263.7°20.1°
C5'C7'N3H25120.9°120.0°
C5'C7'N3H26121.0°120.0°
C5'C7'N3C473.2°97.2°
C5'C7'H25H26117.1°120.0°
C7'C5'C6'H323.0°0.0°
C6C5C4H33102.1°123.8°
C6C5C4N3166.2°148.1°
C6C5C4CM417.2°32.0°
C5C6C7H459.6°59.9°
C5C6C7H559.6°60.0°
C5C6H6H7118.0°120.0°
C5C4N3C7'161.4°157.5°
C5C4N3CM4176.7°180.0°
C4C5C6H626.4°55.0°
C4C5C6H792.3°65.0°
C5C4CM4H22176.3°9.1°
C5C4CM4H233.7°171.0°
OF3CF3CF4H12114.3°120.1°
OF3CF3CF4CF564.3°74.4°
OF3CF3CF4H14175.3°165.6°
C7'N3C4CM415.4°22.5°
N3C7'H25H26117.1°120.0°
C7'N3C2H3463.6°59.0°
N3C4CM4H220.0°170.9°
N3C4CM4H23180.0°9.0°
C4N3C7'H25165.9°22.8°
C4N3C7'H2647.8°142.9°
N3C4C5H3391.7°88.2°
C4N3C2H34106.7°121.1°
CF3CF4CF5H14120.6°120.1°
CF3CF4CF5CF6175.7°180.0°
CF3CF4CF5OF553.2°60.0°
CF4CF3OF3H1349.1°52.7°
CF3CF4OF4H15180.0°60.0°
CF3CF4CF5H1666.1°59.9°
CF4CF5CF6OF5121.9°119.9°
CF4CF5CF6H16118.2°120.1°
CF4CF5OF5H16118.3°120.0°
CF4CF5CF6OF6173.8°175.0°
CF5CF4CF3H1250.1°45.7°
CF5CF4OF4H1555.2°60.0°
CF4CF5OF5H17180.0°60.0°
CF4CF5CF6H1853.8°55.0°
CF4CF5CF6H1966.2°65.0°
C4CM4H22H23180.0°179.9°
CM4C4C5H3384.9°91.8°
CF6CF5OF5H16119.1°120.0°
CF5CF6OF6H18120.0°120.0°
CF5CF6OF6H19120.0°120.0°
CF5CF6OF6PF165.6°180.0°
CF6CF5CF4H1455.2°59.9°
CF6CF5OF5H1757.4°60.0°
CF5CF6H18H19120.0°120.0°
OF5CF5CF6OF664.3°65.0°
OF5CF5CF4H1467.4°60.1°
OF5CF5CF6H18175.7°175.0°
OF5CF5CF6H1955.7°55.0°
CF6OF6PFOF94.1°55.1°
CF6OF6PFOF7116.3°175.0°
CF6OF6PFOF8123.5°64.9°
OF6CF6CF5H1655.6°54.9°
OF6CF6H18H19120.0°120.0°
OF6PFOF9OF7119.1°120.0°
OF6PFOF9OF8115.2°120.0°
OF6PFOF7OF8116.3°120.0°
PFOF6CF6H1874.4°60.1°
PFOF6CF6H1945.6°59.9°
OF6PFOF8H20116.1°60.1°
OF6PFOF7H21117.8°180.0°
OF9PFOF7OF8125.9°120.0°
OF9PFOF8H200.0°180.0°
OF9PFOF7H210.0°60.0°
OF7PFOF8H20125.5°59.9°
OF8PFOF7H21125.9°60.0°
H4C7C6H6179.7°180.0°
H4C7C6H761.0°60.1°
H5C7C6H661.0°60.0°
H5C7C6H7179.7°NaN°
H6C6C5H3376.0°68.9°
H7C6C5H33165.4°171.1°
H9CF1OF1H1159.6°60.0°
H10CF1OF1H1159.6°60.0°
H12CF3OF3H1364.5°172.7°
H12CF3CF4H1470.4°74.3°
H14CF4OF4H1562.7°179.9°
H14CF4CF5H16173.4°180.0°
H16CF5OF5H1761.7°180.0°
H16CF5CF6H1864.4°65.0°
H16CF5CF6H19175.7°175.0°
H29CM2H30H31120.0°120.1°

221716

PDB entries from 2024-06-26

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