Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8M8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C8C2sing1.51Å1.50Å
CC1sing1.51Å1.49Å
C2C1sing1.37Å1.42ÅAromatic
C2C3doub1.36Å1.38ÅAromatic
C1C4doub1.37Å1.34ÅAromatic
N1C7doub1.31Å1.35ÅAromatic
N1C6sing1.34Å1.37ÅAromatic
C3C6sing1.48Å1.45Å
C3Ssing1.76Å1.74ÅAromatic
C4C5sing1.43Å1.43Å
C4Ssing1.76Å1.74ÅAromatic
C7N2sing1.35Å1.30ÅAromatic
C6N3doub1.32Å1.38ÅAromatic
C5Ntrip1.14Å1.15Å
N2N3sing1.40Å1.39ÅAromatic
C7H2sing1.08Å1.08Å
C8H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
CH6sing1.09Å1.10Å
CH7sing1.09Å1.10Å
CH8sing1.09Å1.10Å
N2H1sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C2C1122.6°122.6°
C8C2C3125.9°122.6°
C2C8H3109.5°109.4°
C2C8H4109.5°109.4°
C2C8H5109.5°109.4°
CC1C2122.6°122.7°
CC1C4124.2°122.6°
C1CH6109.5°109.4°
C1CH7109.4°109.4°
C1CH8109.5°109.5°
C1C2C3111.5°114.8°
C2C1C4113.2°114.7°
C2C3C6128.4°125.1°
C2C3S112.6°109.7°
C1C4C5125.5°125.2°
C1C4S113.4°109.6°
C7N1C6106.3°109.8°
N1C7N2112.3°108.4°
N1C7H2123.9°125.8°
N1C6C3124.2°125.7°
N1C6N3107.5°108.6°
C6C3S119.0°125.2°
C3C6N3128.3°125.7°
C3SC489.4°91.2°
C5C4S121.1°125.2°
C4C5N177.9°180.0°
C7N2N3107.0°106.5°
N2C7H2123.9°125.8°
C7N2H1126.4°126.7°
C6N3N2106.8°106.7°
N3N2H1126.5°126.8°
H3C8H4109.5°109.5°
H3C8H5109.5°109.5°
H4C8H5109.5°109.5°
H6CH7109.5°109.4°
H6CH8109.4°109.5°
H7CH8109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C2C1C1.9°0.0°
C8C2C1C3178.8°179.9°
C8C2C1C4179.2°180.0°
C8C2C3C61.8°0.0°
C8C2C3S179.3°179.8°
C2C8H3H4120.0°120.0°
C2C8H3H5120.0°119.9°
C2C8H4H5120.0°120.0°
CC1C2C4177.3°179.9°
CC1C2C3176.9°179.9°
CC1C4C51.9°0.0°
CC1C4S177.2°179.8°
C1CH6H7120.0°119.9°
C1CH6H8120.0°120.0°
C1CH7H8120.0°120.1°
C1C2C3C6177.0°179.9°
C1C2C3S0.5°0.0°
C2C1C4C5179.1°180.0°
C2C1C4S0.1°0.3°
C1C2C8H390.6°89.9°
C1C2C8H4149.3°150.0°
C1C2C8H529.4°30.0°
C2C1CH688.5°90.0°
C2C1CH7151.5°29.9°
C2C1CH831.4°150.0°
C3C2C1C40.4°0.2°
C2C3C6N11.1°0.1°
C2C3C6S177.4°179.8°
C2C3SC40.3°0.2°
C2C3C6N3175.6°179.8°
C3C2C8H390.7°89.9°
C3C2C8H429.3°30.1°
C3C2C8H5149.3°150.1°
C1C4SC30.1°0.2°
C1C4C5S178.9°179.7°
C1C4C5N3.1°125.6°
C4C1CH688.5°90.0°
C4C1CH731.5°150.1°
C4C1CH8151.5°30.0°
C7N1C6C3177.0°179.7°
N1C7N2H2180.0°180.0°
C7N1C6N30.2°0.0°
N1C7N2N30.1°0.0°
N1C7N2H1179.9°180.0°
N1C6C3N3176.7°179.7°
N1C6C3S178.5°179.7°
C6N1C7N20.1°0.0°
N1C6N3N20.3°0.0°
C6N1C7H2179.9°180.0°
C6C3SC4177.4°180.0°
C3C6N3N2176.8°179.7°
C3SC4C5178.9°180.0°
SC3C6N31.7°0.0°
SC4C5N175.8°54.1°
C7N2N3C60.3°0.0°
C7N2N3H1180.0°180.0°
C6N3N2H1179.8°180.0°
N3N2C7H2179.9°180.0°
H2C7N2H10.1°0.0°
H3C8H4H5120.0°120.1°
H6CH7H8120.0°120.0°

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon