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Summary Geometry Related PDB entries

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Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C4	O1	sing	1.44Å	1.43Å
C4	C	sing	1.51Å	1.51Å
O1	C3	sing	1.36Å	1.42Å
O	C	sing	1.43Å	1.43Å
C3	C2	sing	1.54Å	1.51Å
C	C1	sing	1.53Å	1.55Å
C2	N	sing	1.45Å	1.46Å
C1	N	sing	1.48Å	1.46Å
C4	H9	sing	1.09Å	1.10Å
C4	H10	sing	1.09Å	1.10Å
O	H1	sing	0.97Å	0.95Å
C	H	sing	1.09Å	1.10Å
C3	H7	sing	1.09Å	1.10Å
C3	H8	sing	1.09Å	1.10Å
C2	H5	sing	1.09Å	1.10Å
C2	H6	sing	1.09Å	1.10Å
N	H11	sing	1.01Å	1.00Å
C1	H2	sing	1.09Å	1.10Å
C1	H3	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C4	C	114.8°	107.9°
C4	O1	C3	117.4°	117.4°
O1	C4	H9	108.1°	109.8°
O1	C4	H10	108.1°	109.8°
C4	C	O	108.9°	109.0°
C4	C	C1	116.8°	111.8°
C	C4	H9	108.1°	109.8°
C	C4	H10	108.1°	109.7°
C4	C	H	108.8°	109.1°
O1	C3	C2	112.5°	111.5°
O1	C3	H7	108.7°	109.1°
O1	C3	H8	108.7°	109.1°
O	C	C1	104.2°	109.0°
C	O	H1	109.5°	114.0°
O	C	H	109.8°	108.9°
C3	C2	N	113.3°	109.1°
C2	C3	H7	108.7°	109.1°
C2	C3	H8	108.7°	109.1°
C3	C2	H5	108.5°	109.5°
C3	C2	H6	108.5°	109.6°
C	C1	N	117.2°	112.1°
C1	C	H	108.2°	108.9°
C	C1	H2	107.5°	108.9°
C	C1	H3	107.5°	109.0°
C2	N	C1	116.9°	114.2°
N	C2	H5	108.5°	109.5°
N	C2	H6	108.5°	109.5°
C2	N	H11	107.6°	111.0°
C1	N	H11	107.6°	111.0°
N	C1	H2	107.5°	108.9°
N	C1	H3	107.5°	109.0°
H9	C4	H10	109.5°	109.8°
H7	C3	H8	109.5°	109.0°
H5	C2	H6	109.4°	109.6°
H2	C1	H3	109.5°	108.9°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C4	C	H9	120.8°	119.6°
O1	C4	C	H10	120.8°	119.6°
O1	C4	C	O	105.3°	147.4°
C4	O1	C3	C2	94.6°	61.3°
O1	C4	C	C1	12.2°	91.9°
O1	C4	H9	H10	117.5°	120.8°
O1	C4	C	H	135.0°	28.6°
C4	O1	C3	H7	145.0°	178.1°
C4	O1	C3	H8	25.9°	59.2°
C	C4	O1	C3	61.4°	80.7°
C4	C	O	C1	125.3°	122.3°
C4	C	O	H	119.0°	118.9°
C4	C	C1	H	123.1°	120.6°
C4	C	C1	N	69.7°	41.2°
C	C4	H9	H10	117.6°	120.7°
C4	C	O	H1	180.0°	59.9°
C4	C	C1	H2	169.2°	79.5°
C4	C	C1	H3	51.4°	161.9°
O1	C3	C2	H7	120.4°	120.5°
O1	C3	C2	H8	120.5°	120.5°
O1	C3	C2	N	67.3°	75.9°
C3	O1	C4	H9	59.4°	159.7°
C3	O1	C4	H10	177.8°	38.8°
O1	C3	H7	H8	118.6°	119.0°
O1	C3	C2	H5	53.3°	43.9°
O1	C3	C2	H6	172.2°	164.2°
O	C	C1	H	116.8°	118.8°
O	C	C1	N	50.4°	161.8°
O	C	C4	H9	15.5°	27.8°
O	C	C4	H10	133.9°	93.0°
O	C	C1	H2	70.7°	41.2°
O	C	C1	H3	171.5°	77.5°
C3	C2	N	H5	120.6°	119.9°
C3	C2	N	H6	120.6°	119.9°
C3	C2	N	C1	56.8°	93.5°
C2	C3	H7	H8	118.6°	119.0°
C3	C2	H5	H6	118.2°	120.2°
C3	C2	N	H11	177.9°	140.1°
C	C1	N	C2	74.6°	41.8°
C	C1	N	H2	121.1°	120.6°
C	C1	N	H3	121.1°	120.7°
C1	C	C4	H9	133.0°	148.4°
C1	C	C4	H10	108.6°	27.6°
C1	C	O	H1	54.7°	177.8°
C	C1	N	H11	164.3°	168.2°
C	C1	H2	H3	116.5°	118.7°
C2	N	C1	H11	121.1°	126.4°
N	C2	C3	H7	172.3°	163.6°
N	C2	C3	H8	53.2°	44.6°
N	C2	H5	H6	118.2°	120.2°
C2	N	C1	H2	164.2°	162.4°
C2	N	C1	H3	46.5°	78.9°
N	C1	C	H	167.2°	79.4°
C1	N	C2	H5	63.8°	26.4°
C1	N	C2	H6	177.4°	146.6°
N	C1	H2	H3	116.5°	118.7°
H9	C4	C	H	104.2°	91.0°
H10	C4	C	H	14.2°	148.2°
H1	O	C	H	60.9°	59.0°
H	C	C1	H2	46.1°	159.9°
H	C	C1	H3	71.6°	41.3°
H7	C3	C2	H5	67.1°	76.6°
H7	C3	C2	H6	51.7°	43.7°
H8	C3	C2	H5	173.8°	164.4°
H8	C3	C2	H6	67.4°	75.3°
H5	C2	N	H11	57.3°	100.0°
H6	C2	N	H11	61.5°	20.2°
H11	N	C1	H2	43.2°	71.1°
H11	N	C1	H3	74.6°	47.5°

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