Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8ID

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O7NC7Ndoub1.22Å1.23Å
C7NN7Nsing1.35Å1.34Å
C7NC3Nsing1.48Å1.50Å
N7NH7N1sing0.97Å1.00Å
N7NH7N2sing0.97Å1.00Å
C3NC4Ndoub1.40Å1.40ÅAromatic
C3NC2Nsing1.40Å1.38ÅAromatic
C4NC5Nsing1.38Å1.39ÅAromatic
C4NH4Nsing1.08Å1.08Å
C5NC6Ndoub1.38Å1.38ÅAromatic
C5NH5Nsing1.08Å1.08Å
C6NN1Nsing1.32Å1.35ÅAromatic
C6NH6Nsing1.08Å1.08Å
C2NN1Ndoub1.32Å1.35ÅAromatic
C2NH2Nsing1.08Å1.08Å
N1NC1'sing1.47Å1.49Å
C1'C2'sing1.54Å1.54Å
C1'O4'sing1.44Å1.38Å
C1'H1'sing1.09Å1.10Å
C2'O2'sing1.43Å1.41Å
C2'C3'sing1.55Å1.54Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C3'O3'sing1.43Å1.41Å
C3'C4'sing1.54Å1.54Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
O4'C4'sing1.44Å1.46Å
C4'C5'sing1.53Å1.51Å
C4'H4'sing1.09Å1.10Å
C5'O5'sing1.43Å1.44Å
C5'H5'1sing1.09Å1.10Å
C5'H5'2sing1.09Å1.10Å
O5'PNsing1.61Å1.60Å
PNO1Nsing1.61Å1.48Å
PNO2Ndoub1.48Å1.48Å
PNOPPsing1.61Å1.62Å
O1NHO1Nsing0.97Å0.95Å
OPPPAsing1.61Å1.58Å
PAO1Asing1.61Å1.49Å
PAO2Adoub1.48Å1.51Å
PAO5Bsing1.61Å1.60Å
O1AHO1Asing0.97Å0.95Å
O5BC5Bsing1.43Å1.46Å
C5BC4Bsing1.53Å1.51Å
C5BH5A1sing1.09Å1.10Å
C5BH5A2sing1.09Å1.10Å
C4BO4Bsing1.44Å1.43Å
C4BC3Bsing1.54Å1.53Å
C4BH4Bsing1.09Å1.10Å
O4BC1Bsing1.44Å1.38Å
C1BC2Bsing1.55Å1.54Å
C1BN9Asing1.46Å1.45Å
C1BH1Bsing1.09Å1.10Å
C2BO2Bsing1.43Å1.41Å
C2BC3Bsing1.55Å1.52Å
C2BH2Bsing1.09Å1.10Å
O2BHO2Asing0.97Å0.95Å
C3BO3Bsing1.43Å1.41Å
C3BH3Bsing1.09Å1.10Å
O3BHO3Asing0.97Å0.95Å
N9AC8Asing1.36Å1.38ÅAromatic
N9AC4Asing1.37Å1.37ÅAromatic
C8AI8Asing2.10Å2.15Å
C8AN7Adoub1.30Å1.31ÅAromatic
N7AC5Asing1.36Å1.37ÅAromatic
C5AC6Adoub1.40Å1.42ÅAromatic
C5AC4Asing1.41Å1.40ÅAromatic
C6AN6Asing1.38Å1.31Å
C6AN1Asing1.33Å1.39ÅAromatic
N6AH6A1sing0.97Å1.00Å
N6AH6A2sing0.97Å1.00Å
C4AN3Adoub1.33Å1.36ÅAromatic
N3AC2Asing1.32Å1.32ÅAromatic
C2AN1Adoub1.32Å1.36ÅAromatic
C2AH2Asing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O7NC7NN7N122.4°120.0°
O7NC7NC3N118.7°120.0°
N7NC7NC3N119.0°120.0°
C7NN7NH7N1123.7°120.0°
C7NN7NH7N2112.5°120.0°
C7NC3NC4N120.4°120.6°
C7NC3NC2N122.3°120.5°
H7N1N7NH7N2123.7°120.0°
C4NC3NC2N117.3°118.9°
C3NC4NC5N120.4°118.3°
C3NC4NH4N119.8°120.9°
C3NC2NN1N121.1°120.6°
C3NC2NH2N119.5°119.7°
C5NC4NH4N119.8°120.9°
C4NC5NC6N120.2°119.3°
C4NC5NH5N119.9°120.3°
C6NC5NH5N119.9°120.4°
C5NC6NN1N118.4°121.1°
C5NC6NH6N120.8°119.5°
N1NC6NH6N120.8°119.4°
C6NN1NC2N122.6°121.9°
C6NN1NC1'123.4°119.1°
N1NC2NH2N119.4°119.7°
C2NN1NC1'114.0°119.1°
N1NC1'C2'117.2°110.4°
N1NC1'O4'106.6°110.3°
N1NC1'H1'105.4°110.3°
C2'C1'O4'106.6°104.9°
C2'C1'H1'105.3°110.4°
C1'C2'O2'113.8°110.8°
C1'C2'C3'99.0°104.0°
C1'C2'H2'116.0°110.4°
O4'C1'H1'116.3°110.4°
C1'O4'C4'106.8°105.3°
O2'C2'C3'115.9°110.5°
O2'C2'H2'99.1°110.5°
C2'O2'HO2'109.5°106.8°
C3'C2'H2'113.9°110.5°
C2'C3'O3'108.4°110.5°
C2'C3'C4'101.7°104.1°
C2'C3'H3'115.6°110.6°
O3'C3'C4'111.2°110.5°
O3'C3'H3'106.8°110.5°
C3'O3'HO3'109.5°106.8°
C4'C3'H3'113.0°110.5°
C3'C4'O4'107.7°104.8°
C3'C4'C5'115.7°110.5°
C3'C4'H4'106.4°110.4°
O4'C4'C5'109.2°110.4°
O4'C4'H4'113.2°110.3°
C5'C4'H4'104.8°110.3°
C4'C5'O5'107.7°109.5°
C4'C5'H5'1110.4°109.5°
C4'C5'H5'2110.1°109.5°
O5'C5'H5'1110.4°109.5°
O5'C5'H5'2110.0°109.4°
C5'O5'PN117.2°106.8°
H5'1C5'H5'2108.1°109.5°
O5'PNO1N113.7°109.5°
O5'PNO2N102.0°109.5°
O5'PNOPP98.7°109.5°
O1NPNO2N122.0°109.5°
O1NPNOPP105.6°109.5°
PNO1NHO1N109.5°106.8°
O2NPNOPP112.5°109.5°
PNOPPPA133.1°106.8°
OPPPAO1A107.2°109.5°
OPPPAO2A107.9°109.5°
OPPPAO5B104.6°109.5°
O1APAO2A116.5°109.5°
O1APAO5B107.6°109.5°
PAO1AHO1A109.5°106.8°
O2APAO5B112.3°109.4°
PAO5BC5B119.5°106.8°
O5BC5BC4B109.9°109.5°
O5BC5BH5A1109.2°109.5°
O5BC5BH5A2109.3°109.5°
C4BC5BH5A1109.2°109.5°
C4BC5BH5A2109.3°109.5°
C5BC4BO4B110.6°109.9°
C5BC4BC3B116.3°109.9°
C5BC4BH4B102.4°109.9°
H5A1C5BH5A2109.8°109.4°
O4BC4BC3B104.3°107.4°
O4BC4BH4B114.7°109.9°
C4BO4BC1B106.9°107.0°
C3BC4BH4B108.9°109.9°
C4BC3BC2B104.5°104.0°
C4BC3BO3B108.0°110.8°
C4BC3BH3B113.7°110.5°
O4BC1BC2B101.9°103.5°
O4BC1BN9A109.9°110.7°
O4BC1BH1B116.3°110.6°
C2BC1BN9A115.6°110.8°
C2BC1BH1B110.8°110.6°
C1BC2BO2B113.9°110.9°
C1BC2BC3B100.2°102.1°
C1BC2BH2B114.0°110.9°
N9AC1BH1B102.8°110.6°
C1BN9AC8A130.9°126.2°
C1BN9AC4A126.2°126.3°
O2BC2BC3B113.1°110.8°
O2BC2BH2B101.5°110.8°
C2BO2BHO2A109.5°106.8°
C3BC2BH2B114.8°111.0°
C2BC3BO3B110.0°110.5°
C2BC3BH3B111.8°110.5°
O3BC3BH3B108.6°110.4°
C3BO3BHO3A109.5°106.8°
C8AN9AC4A102.9°107.5°
N9AC8AI8A125.4°125.0°
N9AC8AN7A117.6°109.9°
N9AC4AC5A106.5°106.0°
N9AC4AN3A128.4°134.9°
I8AC8AN7A116.9°125.0°
C8AN7AC5A101.1°109.4°
N7AC5AC6A129.9°134.7°
N7AC5AC4A111.8°107.2°
C6AC5AC4A118.2°118.2°
C5AC6AN6A124.6°120.8°
C5AC6AN1A114.5°118.5°
C5AC4AN3A125.1°119.1°
N6AC6AN1A120.9°120.8°
C6AN6AH6A1109.5°120.0°
C6AN6AH6A2109.5°120.0°
C6AN1AC2A123.1°121.2°
H6A1N6AH6A2109.4°120.0°
C4AN3AC2A114.8°120.7°
N3AC2AN1A124.3°122.4°
N3AC2AH2A117.9°118.8°
N1AC2AH2A117.8°118.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O7NC7NN7NC3N179.6°180.0°
O7NC7NN7NH7N10.0°0.0°
O7NC7NN7NH7N2180.0°179.8°
O7NC7NC3NC4N7.5°179.9°
O7NC7NC3NC2N172.0°0.3°
C7NN7NH7N1H7N2180.0°179.8°
N7NC7NC3NC4N172.1°0.0°
N7NC7NC3NC2N8.4°179.8°
C3NC7NN7NH7N1179.6°180.0°
C3NC7NN7NH7N20.4°0.3°
C7NC3NC4NC2N179.5°179.8°
C7NC3NC4NC5N180.0°180.0°
C7NC3NC4NH4N0.0°0.1°
C7NC3NC2NN1N179.8°179.7°
C7NC3NC2NH2N0.1°0.3°
C3NC4NC5NH4N180.0°179.9°
C3NC4NC5NC6N0.5°0.1°
C3NC4NC5NH5N179.5°180.0°
C4NC3NC2NN1N0.4°0.5°
C4NC3NC2NH2N179.6°179.9°
C2NC3NC4NC5N0.5°0.2°
C2NC3NC4NH4N179.5°179.7°
C3NC2NN1NC6N0.2°0.6°
C3NC2NN1NH2N180.0°179.3°
C3NC2NN1NC1'178.9°179.7°
C4NC5NC6NH5N180.0°179.9°
C4NC5NC6NN1N0.2°0.0°
C4NC5NC6NH6N179.7°180.0°
H4NC4NC5NC6N179.5°180.0°
H4NC4NC5NH5N0.4°0.1°
C5NC6NN1NH6N180.0°180.0°
C5NC6NN1NC2N0.1°0.3°
C5NC6NN1NC1'178.8°180.0°
H5NC5NC6NN1N179.8°179.9°
H5NC5NC6NH6N0.3°0.1°
C6NN1NC2NC1'179.0°179.7°
C6NN1NC2NH2N179.8°180.0°
C6NN1NC1'C2'49.4°78.5°
C6NN1NC1'O4'69.8°37.1°
C6NN1NC1'H1'166.1°159.3°
H6NC6NN1NC2N179.9°179.7°
H6NC6NN1NC1'1.2°0.0°
C2NN1NC1'C2'131.6°101.8°
C2NN1NC1'O4'109.2°142.6°
C2NN1NC1'H1'14.9°20.4°
H2NC2NN1NC1'1.2°0.3°
N1NC1'C2'O4'119.2°118.9°
N1NC1'C2'H1'116.7°122.2°
N1NC1'O4'H1'117.1°122.1°
N1NC1'C2'O2'73.7°98.6°
N1NC1'C2'C3'162.7°142.7°
N1NC1'C2'H2'40.4°24.2°
N1NC1'O4'C4'158.9°159.3°
C2'C1'O4'H1'117.0°119.0°
C1'C2'O2'C3'113.8°114.7°
C1'C2'O2'H2'123.9°122.7°
C1'C2'C3'H2'123.8°118.5°
C1'C2'O2'HO2'32.5°176.1°
C1'C2'C3'O3'82.3°118.8°
C1'C2'C3'C4'35.0°0.1°
C1'C2'C3'H3'157.9°118.6°
C2'C1'O4'C4'33.0°40.4°
O4'C1'C2'O2'167.0°142.6°
O4'C1'C2'C3'43.5°23.8°
O4'C1'C2'H2'78.8°94.7°
C1'O4'C4'C3'8.8°40.5°
C1'O4'C4'C5'135.2°159.5°
C1'O4'C4'H4'108.5°78.3°
H1'C1'C2'O2'43.0°23.6°
H1'C1'C2'C3'80.6°95.1°
H1'C1'C2'H2'157.1°146.3°
H1'C1'O4'C4'84.0°78.5°
O2'C2'C3'H2'114.1°122.6°
O2'C2'C3'O3'39.8°0.1°
O2'C2'C3'C4'157.1°118.8°
O2'C2'C3'H3'80.0°122.5°
C3'C2'O2'HO2'146.3°61.5°
C2'C3'O3'C4'111.0°114.7°
C2'C3'O3'H3'125.2°122.7°
C2'C3'C4'H3'124.6°118.7°
C2'C3'O3'HO3'38.7°65.4°
C2'C3'C4'O4'18.3°24.0°
C2'C3'C4'C5'104.1°143.0°
C2'C3'C4'H4'140.0°94.7°
H2'C2'O2'HO2'91.3°61.2°
H2'C2'C3'O3'153.9°122.7°
H2'C2'C3'C4'88.8°118.6°
H2'C2'C3'H3'34.1°0.1°
O3'C3'C4'H3'120.1°122.6°
O3'C3'C4'O4'96.9°142.7°
O3'C3'C4'C5'140.6°98.4°
O3'C3'C4'H4'24.7°23.9°
C4'C3'O3'HO3'72.4°180.0°
C3'C4'O4'C5'126.4°119.0°
C3'C4'O4'H4'117.3°118.8°
C3'C4'C5'H4'116.8°122.3°
C3'C4'C5'O5'64.3°178.1°
C3'C4'C5'H5'156.3°58.1°
C3'C4'C5'H5'2175.7°61.9°
H3'C3'O3'HO3'163.9°57.3°
H3'C3'C4'O4'142.9°94.7°
H3'C3'C4'C5'20.5°24.2°
H3'C3'C4'H4'95.4°146.5°
O4'C4'C5'H4'121.6°122.2°
O4'C4'C5'O5'57.3°66.4°
O4'C4'C5'H5'1177.9°173.6°
O4'C4'C5'H5'262.7°53.5°
C4'C5'O5'H5'1120.7°120.0°
C4'C5'O5'H5'2120.0°120.0°
C4'C5'H5'1H5'2120.5°120.0°
C4'C5'O5'PN173.5°180.0°
H4'C4'C5'O5'178.9°55.8°
H4'C4'C5'H5'160.5°64.2°
H4'C4'C5'H5'258.9°175.7°
O5'C5'H5'1H5'2120.5°120.0°
C5'O5'PNO1N60.3°65.0°
C5'O5'PNO2N166.4°55.0°
C5'O5'PNOPP51.0°175.0°
H5'1C5'O5'PN65.8°60.0°
H5'2C5'O5'PN53.5°60.0°
O5'PNO1NO2N122.9°120.0°
O5'PNO1NOPP107.1°120.0°
O5'PNO2NOPP104.8°120.0°
O5'PNO1NHO1N106.0°60.0°
O5'PNOPPPA176.8°165.0°
O1NPNO2NOPP127.0°120.0°
O1NPNOPPPA59.2°74.9°
O2NPNO1NHO1N16.9°180.0°
O2NPNOPPPA76.2°45.0°
OPPPNO1NHO1N146.9°60.0°
PNOPPPAO1A20.6°80.0°
PNOPPPAO2A146.8°40.1°
PNOPPPAO5B93.4°160.0°
OPPPAO1AO2A120.9°120.0°
OPPPAO1AO5B112.0°120.0°
OPPPAO2AO5B114.7°119.9°
OPPPAO1AHO1A160.6°60.0°
OPPPAO5BC5B59.3°175.0°
O1APAO2AO5B124.7°120.0°
O1APAO5BC5B173.0°65.0°
O2APAO1AHO1A39.7°180.0°
O2APAO5BC5B57.5°55.0°
O5BPAO1AHO1A87.4°60.0°
PAO5BC5BC4B157.0°180.0°
PAO5BC5BH5A137.2°60.0°
PAO5BC5BH5A282.9°60.0°
O5BC5BC4BH5A1119.8°120.0°
O5BC5BC4BH5A2120.0°120.0°
O5BC5BH5A1H5A2119.9°120.0°
O5BC5BC4BO4B175.2°66.7°
O5BC5BC4BC3B56.4°175.3°
O5BC5BC4BH4B62.1°54.3°
C4BC5BH5A1H5A2119.9°120.0°
C5BC4BO4BC3B125.8°119.5°
C5BC4BO4BH4B115.2°121.0°
C5BC4BC3BH4B114.9°121.0°
C5BC4BO4BC1B157.4°145.9°
C5BC4BC3BC2B124.6°121.4°
C5BC4BC3BO3B118.3°119.8°
C5BC4BC3BH3B2.3°2.8°
H5A1C5BC4BO4B55.4°53.3°
H5A1C5BC4BC3B63.4°64.7°
H5A1C5BC4BH4B178.1°174.3°
H5A2C5BC4BO4B64.8°173.2°
H5A2C5BC4BC3B176.5°55.3°
H5A2C5BC4BH4B57.9°65.7°
O4BC4BC3BH4B122.9°119.5°
C4BO4BC1BC2B47.3°40.1°
C4BO4BC1BN9A170.5°158.8°
C4BO4BC1BH1B73.2°78.4°
O4BC4BC3BC2B2.5°1.9°
O4BC4BC3BO3B119.6°120.7°
O4BC4BC3BH3B119.8°116.6°
C3BC4BO4BC1B31.6°26.5°
C4BC3BC2BC1B23.4°21.0°
C4BC3BC2BO2B145.0°139.2°
C4BC3BC2BO3B115.7°118.9°
C4BC3BC2BH3B123.5°118.6°
C4BC3BC2BH2B99.2°97.3°
C4BC3BO3BH3B123.8°122.7°
C4BC3BO3BHO3A171.7°176.2°
H4BC4BO4BC1B87.5°93.0°
H4BC4BC3BC2B120.5°117.6°
H4BC4BC3BO3B3.3°1.2°
H4BC4BC3BH3B117.3°123.8°
O4BC1BC2BN9A119.2°118.6°
O4BC1BC2BH1B124.4°118.4°
O4BC1BN9AH1B124.5°122.9°
O4BC1BC2BO2B163.9°155.2°
O4BC1BC2BC3B42.9°37.1°
O4BC1BC2BH2B80.3°81.2°
O4BC1BN9AC8A63.9°43.6°
O4BC1BN9AC4A116.6°136.8°
C2BC1BN9AH1B120.8°123.0°
C1BC2BO2BC3B113.5°112.7°
C1BC2BO2BH2B122.9°123.6°
C1BC2BC3BH2B122.6°118.3°
C1BC2BO2BHO2A101.3°180.0°
C1BC2BC3BO3B92.3°97.9°
C1BC2BC3BH3B146.9°139.6°
C2BC1BN9AC8A50.8°70.6°
C2BC1BN9AC4A128.7°109.1°
N9AC1BC2BO2B76.9°86.2°
N9AC1BC2BC3B162.1°155.7°
N9AC1BC2BH2B38.9°37.4°
C1BN9AC8AC4A179.6°179.7°
C1BN9AC8AI8A1.4°0.0°
C1BN9AC8AN7A179.8°180.0°
C1BN9AC4AC5A179.8°179.8°
C1BN9AC4AN3A0.3°0.8°
H1BC1BC2BO2B39.6°36.8°
H1BC1BC2BC3B81.4°81.3°
H1BC1BC2BH2B155.3°160.3°
H1BC1BN9AC8A171.6°166.4°
H1BC1BN9AC4A7.9°13.9°
O2BC2BC3BH2B115.8°123.5°
O2BC2BC3BO3B29.3°20.3°
O2BC2BC3BH3B91.5°102.2°
C3BC2BO2BHO2A145.2°67.3°
C2BC3BO3BH3B122.7°122.5°
C2BC3BO3BHO3A58.2°61.5°
H2BC2BO2BHO2A21.7°56.4°
H2BC2BC3BO3B145.1°143.8°
H2BC2BC3BH3B24.3°21.3°
H3BC3BO3BHO3A64.6°61.1°
N9AC8AI8AN7A178.9°180.0°
N9AC8AN7AC5A0.1°0.0°
C8AN9AC4AC5A0.2°0.4°
C8AN9AC4AN3A179.9°179.5°
C4AN9AC8AI8A179.0°179.7°
C4AN9AC8AN7A0.2°0.3°
N9AC4AC5AN7A0.2°0.4°
N9AC4AC5AC6A179.6°179.8°
N9AC4AC5AN3A179.9°179.2°
N9AC4AN3AC2A179.7°179.6°
I8AC8AN7AC5A179.0°180.0°
C8AN7AC5AC6A179.7°179.9°
C8AN7AC5AC4A0.1°0.3°
N7AC5AC6AC4A179.7°179.6°
N7AC5AC6AN6A0.1°0.1°
N7AC5AC6AN1A179.8°180.0°
N7AC5AC4AN3A179.9°179.7°
C5AC6AN6AN1A179.9°179.9°
C5AC6AN6AH6A119.5°0.0°
C5AC6AN6AH6A2100.4°180.0°
C6AC5AC4AN3A0.3°0.6°
C5AC6AN1AC2A0.6°0.1°
C4AC5AC6AN6A179.6°179.7°
C4AC5AC6AN1A0.5°0.3°
C5AC4AN3AC2A0.2°0.6°
C6AN6AH6A1H6A2120.0°180.0°
N6AC6AN1AC2A179.5°180.0°
N1AC6AN6AH6A1160.4°180.0°
N1AC6AN6AH6A279.7°0.0°
C6AN1AC2AN3A0.6°0.1°
C6AN1AC2AH2A179.4°180.0°
C4AN3AC2AN1A0.3°0.4°
C4AN3AC2AH2A179.7°179.7°
N3AC2AN1AH2A180.0°179.9°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon