Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8FL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CM4C4sing1.51Å1.51Å
C4C5doub1.32Å1.35Å
C4N3sing1.38Å1.35Å
C6C5sing1.51Å1.48Å
C6C7sing1.53Å1.49Å
C7'N3sing1.47Å1.48Å
C7'C5'sing1.51Å1.47Å
C6'N1'doub1.33Å1.37ÅAromatic
C6'C5'sing1.38Å1.37ÅAromatic
C5S1sing1.78Å1.74Å
N3C2sing1.47Å1.45Å
O1BPBdoub1.48Å1.60Å
O7C7sing1.43Å1.46Å
O7PAsing1.61Å1.60Å
N1'C2'sing1.32Å1.35ÅAromatic
C5'C4'doub1.40Å1.43ÅAromatic
C2S1sing1.83Å1.76Å
C2OC2sing1.43Å1.39Å
O1APAdoub1.48Å1.44Å
PAO3Asing1.61Å1.57Å
PAO2Asing1.61Å1.47Å
O3BPBsing1.61Å1.45Å
PBO3Asing1.61Å1.56Å
PBO2Bsing1.61Å1.42Å
C2'CM2sing1.51Å1.46Å
C2'N3'doub1.32Å1.33ÅAromatic
C4'N3'sing1.33Å1.36ÅAromatic
C4'N4'sing1.39Å1.32Å
C6'H1sing1.08Å1.08Å
CM4H2sing1.09Å1.10Å
CM4H3sing1.09Å1.10Å
CM4H4sing1.09Å1.10Å
CM2H5sing1.09Å1.10Å
CM2H6sing1.09Å1.10Å
CM2H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
C7H9sing1.09Å1.10Å
C6H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
C7'H12sing1.09Å1.10Å
C7'H13sing1.09Å1.10Å
C2H14sing1.09Å1.10Å
N4'H15sing0.97Å1.00Å
N4'H16sing0.97Å1.00Å
O3BH17sing0.97Å0.95Å
OC2H18sing0.97Å0.95Å
O2BH19sing0.97Å0.95Å
O2AH20sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CM4C4C5125.5°119.4°
CM4C4N3121.6°119.3°
C4CM4H2109.5°109.4°
C4CM4H3109.5°109.5°
C4CM4H4109.5°109.5°
C5C4N3112.9°121.2°
C4C5C6128.2°126.9°
C4C5S1113.3°106.2°
C4N3C7'124.1°122.8°
C4N3C2112.7°114.5°
C5C6C7110.5°109.5°
C6C5S1118.5°126.9°
C5C6H10109.2°109.5°
C5C6H11109.2°109.5°
C6C7O7108.2°109.5°
C6C7H8109.8°109.5°
C6C7H9109.8°109.4°
C7C6H10109.2°109.4°
C7C6H11109.2°109.5°
N3C7'C5'113.4°109.5°
C7'N3C2122.0°122.7°
N3C7'H12108.5°109.4°
N3C7'H13108.5°109.5°
C7'C5'C6'120.1°120.9°
C7'C5'C4'123.9°120.8°
C5'C7'H12108.5°109.5°
C5'C7'H13108.5°109.5°
N1'C6'C5'120.9°119.2°
C6'N1'C2'120.9°121.0°
N1'C6'H1119.5°120.4°
C6'C5'C4'115.9°118.3°
C5'C6'H1119.6°120.4°
C5S1C289.1°95.9°
N3C2S1106.9°102.1°
N3C2OC295.4°110.9°
N3C2H14118.4°111.1°
O1BPBO3B103.5°109.5°
O1BPBO3A97.4°109.5°
O1BPBO2B106.1°109.5°
C7O7PA112.7°123.0°
O7C7H8109.7°109.5°
O7C7H9109.8°109.5°
O7PAO1A107.5°109.4°
O7PAO3A102.2°109.5°
O7PAO2A106.4°109.5°
N1'C2'CM2118.2°119.1°
N1'C2'N3'121.6°121.8°
C5'C4'N3'121.8°118.9°
C5'C4'N4'121.0°120.5°
S1C2OC2100.7°110.8°
S1C2H14113.0°110.8°
OC2C2H14119.8°110.8°
C2OC2H18109.5°114.0°
O1APAO3A111.5°109.5°
O1APAO2A116.9°109.5°
O3APAO2A111.0°109.5°
PAO3APB136.4°134.0°
PAO2AH20109.5°114.0°
O3BPBO3A113.1°109.5°
O3BPBO2B121.1°109.5°
PBO3BH17109.5°114.0°
O3APBO2B112.2°109.4°
PBO2BH19109.5°114.0°
CM2C2'N3'120.2°119.1°
C2'CM2H5109.5°109.5°
C2'CM2H6109.5°109.5°
C2'CM2H7109.5°109.5°
C2'N3'C4'118.8°120.7°
N3'C4'N4'117.1°120.5°
C4'N4'H15109.5°120.0°
C4'N4'H16109.4°120.0°
H2CM4H3109.5°109.5°
H2CM4H4109.5°109.4°
H3CM4H4109.4°109.5°
H5CM2H6109.5°109.5°
H5CM2H7109.5°109.5°
H6CM2H7109.5°109.5°
H8C7H9109.5°109.4°
H10C6H11109.5°109.5°
H12C7'H13109.5°109.5°
H15N4'H16109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CM4C4C5N3179.6°179.7°
CM4C4C5C61.3°0.0°
CM4C4N3C7'3.2°0.0°
CM4C4C5S1179.7°180.0°
CM4C4N3C2164.5°180.0°
C4CM4H2H3120.0°120.0°
C4CM4H2H4120.0°120.0°
C4CM4H3H4120.0°120.0°
C4C5C6S1179.0°180.0°
C4C5C6C7116.1°95.0°
C5C4N3C7'177.2°179.7°
C5C4N3C215.1°0.2°
C4C5S1C212.4°0.1°
C5C4CM4H2180.0°0.0°
C5C4CM4H360.0°120.0°
C5C4CM4H460.0°119.9°
C4C5C6H10123.8°25.0°
C4C5C6H114.1°145.0°
N3C4C5C6178.3°179.7°
C4N3C7'C2166.6°179.9°
C4N3C7'C5'81.7°90.0°
N3C4C5S10.7°0.2°
C4N3C2S123.5°0.1°
C4N3C2OC2126.5°118.2°
N3C4CM4H20.5°179.8°
N3C4CM4H3120.5°60.2°
N3C4CM4H4119.6°59.8°
C4N3C7'H1238.9°30.0°
C4N3C7'H13157.7°150.0°
C4N3C2H14105.4°118.1°
C5C6C7H10120.1°120.0°
C5C6C7H11120.2°120.0°
C5C6C7O7176.5°180.0°
C6C5S1C2166.7°179.8°
C5C6C7H863.7°59.9°
C5C6C7H956.7°60.0°
C5C6H10H11119.5°120.0°
C7C6C5S164.9°85.0°
C6C7O7H8119.8°120.1°
C6C7O7H9119.8°120.0°
C6C7O7PA157.0°180.0°
C6C7H8H9120.6°119.9°
C7C6H10H11119.5°120.0°
N3C7'C5'H12120.6°119.9°
N3C7'C5'H13120.6°120.1°
N3C7'C5'C6'116.5°100.0°
N3C7'C5'C4'66.0°80.1°
C7'N3C2S1168.5°179.8°
C7'N3C2OC265.6°61.7°
N3C7'H12H13118.2°120.0°
C7'N3C2H1462.5°62.0°
C7'C5'C6'N1'178.0°180.0°
C7'C5'C6'C4'177.7°179.9°
C5'C7'N3C2111.7°90.1°
C7'C5'C4'N3'179.0°180.0°
C7'C5'C4'N4'2.1°0.4°
C7'C5'C6'H12.0°0.0°
C5'C7'H12H13118.2°120.0°
N1'C6'C5'H1180.0°180.0°
N1'C6'C5'C4'0.3°0.0°
C6'N1'C2'CM2178.1°180.0°
C6'N1'C2'N3'3.2°0.0°
C5'C6'N1'C2'1.2°0.0°
C6'C5'C4'N3'1.4°0.1°
C6'C5'C4'N4'179.7°179.7°
C6'C5'C7'H124.0°19.9°
C6'C5'C7'H13122.9°139.9°
C5S1C2N319.3°0.0°
C5S1C2OC2118.4°118.2°
S1C5C6H1055.2°155.0°
S1C5C6H11174.9°35.0°
C5S1C2H14112.6°118.4°
N3C2S1OC299.1°118.2°
N3C2S1H14131.9°118.4°
N3C2OC2H14127.1°123.9°
C2N3C7'H12127.7°150.0°
C2N3C7'H138.9°30.0°
N3C2OC2H18180.0°174.2°
O1BPBO3APA80.5°40.0°
O1BPBO3BO3A104.2°120.0°
O1BPBO3BO2B118.5°120.0°
O1BPBO3AO2B110.7°120.0°
O1BPBO3BH170.0°60.1°
O1BPBO2BH190.0°179.9°
C7O7PAO1A164.2°55.0°
C7O7PAO3A78.3°175.0°
C7O7PAO2A38.2°65.0°
O7C7H8H9120.6°120.0°
O7C7C6H1056.4°60.0°
O7C7C6H1163.3°60.0°
O7PAO1AO3A111.3°120.0°
O7PAO1AO2A119.4°120.0°
O7PAO3AO2A113.1°120.0°
O7PAO3APB108.1°165.0°
PAO7C7H883.2°60.0°
PAO7C7H937.2°60.0°
O7PAO2AH20120.0°60.1°
N1'C2'CM2N3'178.7°179.9°
N1'C2'N3'C4'4.2°0.1°
C2'N1'C6'H1178.8°180.0°
N1'C2'CM2H50.0°90.0°
N1'C2'CM2H6120.0°150.0°
N1'C2'CM2H7120.0°30.0°
C5'C4'N3'C2'3.3°0.1°
C5'C4'N3'N4'178.9°179.6°
C4'C5'C6'H1179.7°180.0°
C4'C5'C7'H12173.4°160.0°
C4'C5'C7'H1354.6°40.0°
C5'C4'N4'H15178.9°179.7°
C5'C4'N4'H1661.1°0.4°
S1C2OC2H14124.5°123.4°
S1C2OC2H1871.6°61.5°
O1APAO3AO2A132.3°120.0°
O1APAO3APB6.4°45.0°
O1APAO2AH200.0°180.0°
PAO3APBO3B27.6°160.0°
PAO3APBO2B168.8°80.0°
O3APAO2AH20129.5°60.0°
O2APAO3APB138.8°75.0°
O3BPBO3AO2B141.2°120.0°
O3BPBO2BH19117.2°60.0°
O3APBO3BH17104.2°179.9°
O3APBO2BH19105.2°59.9°
O2BPBO3BH17118.5°60.0°
CM2C2'N3'C4'177.2°180.0°
C2'CM2H5H6120.0°120.0°
C2'CM2H5H7120.0°120.0°
C2'CM2H6H7120.0°120.0°
C2'N3'C4'N4'177.8°179.7°
N3'C2'CM2H5178.7°90.0°
N3'C2'CM2H661.3°30.1°
N3'C2'CM2H758.7°150.0°
N3'C4'N4'H150.0°0.1°
N3'C4'N4'H16120.0°180.0°
C4'N4'H15H16120.0°179.9°
H2CM4H3H4120.0°120.0°
H5CM2H6H7120.0°120.0°
H8C7C6H10176.2°60.1°
H8C7C6H1156.5°180.0°
H9C7C6H1063.4°180.0°
H9C7C6H11176.8°60.0°
H14C2OC2H1852.9°61.9°

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon