8DG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| PG | O1G | doub | 1.48Å | 1.50Å | |
| PG | O2G | sing | 1.61Å | 1.50Å | |
| PG | O3G | sing | 1.61Å | 1.53Å | |
| PG | O3B | sing | 1.61Å | 1.60Å | |
| O2G | HOG2 | sing | 0.97Å | 0.95Å | |
| O3G | H3G | sing | 0.97Å | 0.95Å | |
| O3B | PB | sing | 1.61Å | 1.62Å | |
| PB | O1B | doub | 1.48Å | 1.48Å | |
| PB | O2B | sing | 1.61Å | 1.48Å | |
| PB | O3A | sing | 1.61Å | 1.58Å | |
| O2B | HOB2 | sing | 0.97Å | 0.95Å | |
| O3A | PA | sing | 1.61Å | 1.62Å | |
| PA | O1A | doub | 1.48Å | 1.49Å | |
| PA | O2A | sing | 1.61Å | 1.49Å | |
| PA | O5' | sing | 1.61Å | 1.59Å | |
| O2A | HOA2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| C4' | O4' | sing | 1.45Å | 1.46Å | |
| C4' | C3' | sing | 1.55Å | 1.55Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.55Å | 1.50Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | H1 | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.54Å | 1.49Å | |
| C2' | H2'1 | sing | 1.09Å | 1.11Å | |
| C2' | H2'2 | sing | 1.09Å | 1.12Å | |
| C1' | N9 | sing | 1.46Å | 1.47Å | |
| C1' | H1' | sing | 1.09Å | 1.12Å | |
| N9 | C8 | sing | 1.35Å | 1.38Å | |
| N9 | C4 | sing | 1.38Å | 1.36Å | |
| C8 | N7 | sing | 1.35Å | 1.31Å | |
| C8 | O8 | doub | 1.22Å | 1.24Å | |
| N7 | C5 | sing | 1.40Å | 1.40Å | |
| N7 | HN7 | sing | 0.97Å | 1.02Å | |
| C5 | C6 | sing | 1.40Å | 1.43Å | |
| C5 | C4 | doub | 1.39Å | 1.37Å | |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| C6 | N1 | sing | 1.35Å | 1.41Å | |
| N1 | C2 | sing | 1.36Å | 1.38Å | |
| N1 | HN1 | sing | 0.97Å | 1.02Å | |
| C2 | N2 | sing | 1.37Å | 1.34Å | |
| C2 | N3 | doub | 1.31Å | 1.31Å | |
| N2 | HN21 | sing | 0.97Å | 1.02Å | |
| N2 | HN22 | sing | 0.97Å | 1.02Å | |
| N3 | C4 | sing | 1.34Å | 1.35Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O2G | 112.8° | 109.5° |
| O1G | PG | O3G | 109.6° | 109.5° |
| O1G | PG | O3B | 108.3° | 109.5° |
| O2G | PG | O3G | 109.6° | 109.5° |
| O2G | PG | O3B | 106.6° | 109.5° |
| PG | O2G | HOG2 | 112.8° | 106.8° |
| O3G | PG | O3B | 109.8° | 109.4° |
| PG | O3G | H3G | 109.6° | 106.8° |
| PG | O3B | PB | 129.5° | 106.8° |
| O3B | PB | O1B | 110.2° | 109.4° |
| O3B | PB | O2B | 110.1° | 109.5° |
| O3B | PB | O3A | 104.1° | 109.5° |
| O1B | PB | O2B | 112.9° | 109.5° |
| O1B | PB | O3A | 108.7° | 109.4° |
| O2B | PB | O3A | 110.6° | 109.5° |
| PB | O2B | HOB2 | 110.1° | 106.8° |
| PB | O3A | PA | 135.4° | 106.8° |
| O3A | PA | O1A | 107.7° | 109.5° |
| O3A | PA | O2A | 107.9° | 109.5° |
| O3A | PA | O5' | 100.9° | 109.5° |
| O1A | PA | O2A | 115.4° | 109.5° |
| O1A | PA | O5' | 111.9° | 109.5° |
| O2A | PA | O5' | 111.8° | 109.5° |
| PA | O2A | HOA2 | 107.9° | 106.9° |
| PA | O5' | C5' | 123.1° | 106.8° |
| O5' | C5' | C4' | 108.0° | 109.5° |
| O5' | C5' | H5'1 | 112.8° | 109.5° |
| O5' | C5' | H5'2 | 112.8° | 109.5° |
| C4' | C5' | H5'1 | 112.7° | 109.4° |
| C4' | C5' | H5'2 | 112.8° | 109.4° |
| C5' | C4' | O4' | 113.1° | 110.8° |
| C5' | C4' | C3' | 114.5° | 110.6° |
| C5' | C4' | H4' | 101.9° | 110.6° |
| H5'1 | C5' | H5'2 | 97.7° | 109.5° |
| O4' | C4' | C3' | 104.7° | 103.6° |
| O4' | C4' | H4' | 112.1° | 110.5° |
| C4' | O4' | C1' | 103.1° | 106.9° |
| C3' | C4' | H4' | 110.7° | 110.6° |
| C4' | C3' | O3' | 110.1° | 111.0° |
| C4' | C3' | C2' | 104.0° | 102.1° |
| C4' | C3' | H3' | 113.9° | 110.9° |
| O4' | C1' | C2' | 104.1° | 107.5° |
| O4' | C1' | N9 | 110.8° | 109.9° |
| O4' | C1' | H1' | 114.4° | 109.9° |
| O3' | C3' | C2' | 112.9° | 110.9° |
| O3' | C3' | H3' | 105.1° | 110.8° |
| C3' | O3' | H1 | 110.1° | 106.8° |
| C2' | C3' | H3' | 111.1° | 110.9° |
| C3' | C2' | C1' | 100.1° | 104.1° |
| C3' | C2' | H2'1 | 115.8° | 110.5° |
| C3' | C2' | H2'2 | 115.8° | 110.5° |
| C1' | C2' | H2'1 | 115.8° | 110.5° |
| C1' | C2' | H2'2 | 115.8° | 110.5° |
| C2' | C1' | N9 | 115.3° | 109.9° |
| C2' | C1' | H1' | 109.7° | 109.9° |
| H2'1 | C2' | H2'2 | 94.6° | 110.6° |
| N9 | C1' | H1' | 102.9° | 109.9° |
| C1' | N9 | C8 | 128.7° | 125.6° |
| C1' | N9 | C4 | 125.1° | 125.6° |
| C8 | N9 | C4 | 106.2° | 108.8° |
| N9 | C8 | N7 | 112.8° | 109.5° |
| N9 | C8 | O8 | 120.5° | 125.3° |
| N9 | C4 | C5 | 106.7° | 106.9° |
| N9 | C4 | N3 | 124.7° | 133.5° |
| N7 | C8 | O8 | 126.7° | 125.3° |
| C8 | N7 | C5 | 104.1° | 107.9° |
| C8 | N7 | HN7 | 125.7° | 126.1° |
| C5 | N7 | HN7 | 130.2° | 126.0° |
| N7 | C5 | C6 | 131.2° | 134.0° |
| N7 | C5 | C4 | 110.1° | 107.0° |
| C6 | C5 | C4 | 118.7° | 119.0° |
| C5 | C6 | O6 | 129.6° | 120.8° |
| C5 | C6 | N1 | 111.8° | 118.5° |
| C5 | C4 | N3 | 128.6° | 119.6° |
| O6 | C6 | N1 | 118.5° | 120.7° |
| C6 | N1 | C2 | 124.1° | 120.1° |
| C6 | N1 | HN1 | 118.8° | 119.9° |
| C2 | N1 | HN1 | 117.0° | 119.9° |
| N1 | C2 | N2 | 116.0° | 119.2° |
| N1 | C2 | N3 | 124.2° | 121.7° |
| N2 | C2 | N3 | 119.9° | 119.1° |
| C2 | N2 | HN21 | 109.9° | 120.1° |
| C2 | N2 | HN22 | 116.0° | 120.0° |
| C2 | N3 | C4 | 112.6° | 121.1° |
| HN21 | N2 | HN22 | 109.9° | 119.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O2G | O3G | 122.5° | 120.0° |
| O1G | PG | O2G | O3B | 118.8° | 120.0° |
| O1G | PG | O3G | O3B | 118.9° | 120.0° |
| O1G | PG | O2G | HOG2 | 180.0° | 180.0° |
| O1G | PG | O3G | H3G | 180.0° | 60.1° |
| O1G | PG | O3B | PB | 36.2° | 40.0° |
| O2G | PG | O3G | O3B | 116.8° | 120.0° |
| O2G | PG | O3G | H3G | 55.6° | 59.9° |
| O2G | PG | O3B | PB | 157.9° | 80.0° |
| O3G | PG | O2G | HOG2 | 57.5° | 60.0° |
| O3G | PG | O3B | PB | 83.5° | 160.0° |
| O3B | PG | O2G | HOG2 | 61.2° | 59.9° |
| O3B | PG | O3G | H3G | 61.2° | 180.0° |
| PG | O3B | PB | O1B | 44.2° | 45.0° |
| PG | O3B | PB | O2B | 80.9° | 75.0° |
| PG | O3B | PB | O3A | 160.5° | 165.0° |
| O3B | PB | O1B | O2B | 123.5° | 120.0° |
| O3B | PB | O1B | O3A | 113.4° | 120.0° |
| O3B | PB | O2B | O3A | 114.5° | 120.0° |
| O3B | PB | O2B | HOB2 | 180.0° | 60.0° |
| O3B | PB | O3A | PA | 30.1° | 160.0° |
| O1B | PB | O2B | O3A | 122.0° | 120.0° |
| O1B | PB | O2B | HOB2 | 56.5° | 180.0° |
| O1B | PB | O3A | PA | 147.5° | 40.0° |
| O2B | PB | O3A | PA | 88.1° | 80.0° |
| O3A | PB | O2B | HOB2 | 65.5° | 60.1° |
| PB | O3A | PA | O1A | 171.5° | 45.0° |
| PB | O3A | PA | O2A | 46.3° | 75.0° |
| PB | O3A | PA | O5' | 71.1° | 165.0° |
| O3A | PA | O1A | O2A | 120.6° | 120.0° |
| O3A | PA | O1A | O5' | 110.0° | 120.0° |
| O3A | PA | O2A | O5' | 110.0° | 120.0° |
| O3A | PA | O2A | HOA2 | 180.0° | 60.0° |
| O3A | PA | O5' | C5' | 71.4° | 175.0° |
| O1A | PA | O2A | O5' | 129.4° | 120.0° |
| O1A | PA | O2A | HOA2 | 59.5° | 180.0° |
| O1A | PA | O5' | C5' | 42.9° | 55.0° |
| O2A | PA | O5' | C5' | 174.2° | 65.0° |
| O5' | PA | O2A | HOA2 | 70.0° | 60.0° |
| PA | O5' | C5' | C4' | 165.5° | 180.0° |
| PA | O5' | C5' | H5'1 | 69.2° | 60.0° |
| PA | O5' | C5' | H5'2 | 40.3° | 60.0° |
| O5' | C5' | C4' | H5'1 | 125.3° | 120.0° |
| O5' | C5' | C4' | H5'2 | 125.3° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 118.7° | 120.1° |
| O5' | C5' | C4' | O4' | 174.7° | 70.7° |
| O5' | C5' | C4' | C3' | 65.4° | 175.0° |
| O5' | C5' | C4' | H4' | 54.1° | 52.1° |
| C4' | C5' | H5'1 | H5'2 | 118.7° | 120.0° |
| C5' | C4' | O4' | C3' | 125.3° | 118.7° |
| C5' | C4' | O4' | H4' | 114.5° | 122.9° |
| C5' | C4' | C3' | H4' | 114.4° | 122.9° |
| C5' | C4' | O4' | C1' | 154.6° | 158.5° |
| C5' | C4' | C3' | O3' | 113.8° | 86.1° |
| C5' | C4' | C3' | C2' | 124.9° | 155.7° |
| C5' | C4' | C3' | H3' | 3.9° | 37.5° |
| H5'1 | C5' | C4' | O4' | 60.1° | 169.3° |
| H5'1 | C5' | C4' | C3' | 59.9° | 55.0° |
| H5'1 | C5' | C4' | H4' | 179.4° | 67.9° |
| H5'2 | C5' | C4' | O4' | 49.4° | 49.3° |
| H5'2 | C5' | C4' | C3' | 169.3° | 65.0° |
| H5'2 | C5' | C4' | H4' | 71.2° | 172.1° |
| O4' | C4' | C3' | H4' | 121.1° | 118.4° |
| O4' | C4' | C3' | O3' | 121.7° | 155.2° |
| O4' | C4' | C3' | C2' | 0.4° | 36.9° |
| O4' | C4' | C3' | H3' | 120.6° | 81.3° |
| C4' | O4' | C1' | C2' | 48.2° | 26.3° |
| C4' | O4' | C1' | N9 | 172.7° | 145.8° |
| C4' | O4' | C1' | H1' | 71.5° | 93.2° |
| C3' | C4' | O4' | C1' | 29.2° | 39.8° |
| C4' | C3' | O3' | C2' | 115.8° | 112.8° |
| C4' | C3' | O3' | H3' | 123.0° | 123.6° |
| C4' | C3' | C2' | H3' | 122.9° | 118.2° |
| C4' | C3' | O3' | H1 | 180.0° | 174.2° |
| C4' | C3' | C2' | C1' | 26.6° | 20.8° |
| C4' | C3' | C2' | H2'1 | 151.9° | 97.8° |
| C4' | C3' | C2' | H2'2 | 98.7° | 139.5° |
| H4' | C4' | O4' | C1' | 90.9° | 78.6° |
| H4' | C4' | C3' | O3' | 0.6° | 36.8° |
| H4' | C4' | C3' | C2' | 120.7° | 81.5° |
| H4' | C4' | C3' | H3' | 118.3° | 160.4° |
| O4' | C1' | C2' | C3' | 46.8° | 2.0° |
| O4' | C1' | C2' | N9 | 121.6° | 119.5° |
| O4' | C1' | C2' | H1' | 122.8° | 119.5° |
| O4' | C1' | C2' | H2'1 | 172.1° | 120.6° |
| O4' | C1' | C2' | H2'2 | 78.5° | 116.7° |
| O4' | C1' | N9 | H1' | 122.7° | 121.0° |
| O4' | C1' | N9 | C8 | 65.8° | 53.3° |
| O4' | C1' | N9 | C4 | 114.9° | 126.7° |
| O3' | C3' | C2' | H3' | 117.8° | 123.5° |
| O3' | C3' | C2' | C1' | 92.8° | 139.1° |
| O3' | C3' | C2' | H2'1 | 32.5° | 20.5° |
| O3' | C3' | C2' | H2'2 | 142.0° | 102.2° |
| C2' | C3' | O3' | H1 | 64.2° | 61.4° |
| C3' | C2' | C1' | H2'1 | 125.3° | 118.6° |
| C3' | C2' | C1' | H2'2 | 125.3° | 118.7° |
| C3' | C2' | H2'1 | H2'2 | 121.6° | 122.7° |
| C3' | C2' | C1' | N9 | 168.4° | 121.5° |
| C3' | C2' | C1' | H1' | 76.0° | 117.5° |
| H3' | C3' | O3' | H1 | 57.0° | 62.2° |
| H3' | C3' | C2' | C1' | 149.5° | 97.3° |
| H3' | C3' | C2' | H2'1 | 85.2° | 144.1° |
| H3' | C3' | C2' | H2'2 | 24.2° | 21.3° |
| C1' | C2' | H2'1 | H2'2 | 121.6° | 122.6° |
| C2' | C1' | N9 | H1' | 119.4° | 121.0° |
| C2' | C1' | N9 | C8 | 52.1° | 64.7° |
| C2' | C1' | N9 | C4 | 127.2° | 115.3° |
| H2'1 | C2' | C1' | N9 | 66.4° | 119.9° |
| H2'1 | C2' | C1' | H1' | 49.2° | 1.0° |
| H2'2 | C2' | C1' | N9 | 43.1° | 2.8° |
| H2'2 | C2' | C1' | H1' | 158.7° | 123.8° |
| C1' | N9 | C8 | C4 | 179.4° | 180.0° |
| C1' | N9 | C8 | N7 | 178.9° | 180.0° |
| C1' | N9 | C8 | O8 | 0.9° | 0.0° |
| C1' | N9 | C4 | C5 | 178.8° | 180.0° |
| C1' | N9 | C4 | N3 | 0.9° | 0.0° |
| H1' | C1' | N9 | C8 | 171.5° | 174.3° |
| H1' | C1' | N9 | C4 | 7.8° | 5.7° |
| N9 | C8 | N7 | O8 | 179.8° | 180.0° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| N9 | C8 | N7 | HN7 | 179.9° | 180.0° |
| C8 | N9 | C4 | C5 | 0.6° | 0.0° |
| C8 | N9 | C4 | N3 | 179.7° | 180.0° |
| C4 | N9 | C8 | N7 | 0.5° | 0.0° |
| C4 | N9 | C8 | O8 | 179.7° | 180.0° |
| N9 | C4 | C5 | N7 | 0.6° | 0.0° |
| N9 | C4 | C5 | C6 | 179.2° | 180.0° |
| N9 | C4 | C5 | N3 | 179.7° | 180.0° |
| N9 | C4 | N3 | C2 | 179.7° | 180.0° |
| C8 | N7 | C5 | HN7 | 180.0° | 180.0° |
| C8 | N7 | C5 | C6 | 179.5° | 180.0° |
| C8 | N7 | C5 | C4 | 0.3° | 0.0° |
| O8 | C8 | N7 | C5 | 179.9° | 180.0° |
| O8 | C8 | N7 | HN7 | 0.1° | 0.0° |
| N7 | C5 | C6 | C4 | 179.7° | 180.0° |
| N7 | C5 | C6 | O6 | 0.3° | 0.0° |
| N7 | C5 | C6 | N1 | 179.7° | 179.7° |
| N7 | C5 | C4 | N3 | 179.7° | 180.0° |
| HN7 | N7 | C5 | C6 | 0.5° | 0.0° |
| HN7 | N7 | C5 | C4 | 179.7° | 180.0° |
| C5 | C6 | O6 | N1 | 180.0° | 179.8° |
| C5 | C6 | N1 | C2 | 0.3° | 0.5° |
| C5 | C6 | N1 | HN1 | 179.7° | 180.0° |
| C6 | C5 | C4 | N3 | 0.5° | 0.0° |
| C4 | C5 | C6 | O6 | 179.4° | 180.0° |
| C4 | C5 | C6 | N1 | 0.6° | 0.2° |
| C5 | C4 | N3 | C2 | 0.1° | 0.0° |
| O6 | C6 | N1 | C2 | 179.8° | 179.7° |
| O6 | C6 | N1 | HN1 | 0.2° | 0.2° |
| C6 | N1 | C2 | HN1 | 180.0° | 179.5° |
| C6 | N1 | C2 | N2 | 179.8° | 179.7° |
| C6 | N1 | C2 | N3 | 0.3° | 0.5° |
| N1 | C2 | N2 | N3 | 180.0° | 179.8° |
| N1 | C2 | N2 | HN21 | 54.7° | 179.8° |
| N1 | C2 | N2 | HN22 | 180.0° | 0.5° |
| N1 | C2 | N3 | C4 | 0.4° | 0.2° |
| HN1 | N1 | C2 | N2 | 0.2° | 0.2° |
| HN1 | N1 | C2 | N3 | 179.7° | 180.0° |
| C2 | N2 | HN21 | HN22 | 128.8° | 179.7° |
| N2 | C2 | N3 | C4 | 179.6° | 180.0° |
| N3 | C2 | N2 | HN21 | 125.2° | 0.0° |
| N3 | C2 | N2 | HN22 | 0.1° | 179.7° |
