Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8D2

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C10doub1.38Å1.37ÅAromatic
C9C8sing1.38Å1.39ÅAromatic
C10C11sing1.38Å1.37ÅAromatic
C8C7doub1.38Å1.39ÅAromatic
C11C12doub1.38Å1.37ÅAromatic
C7C12sing1.38Å1.39ÅAromatic
C7C6sing1.51Å1.51Å
C13C14sing1.38Å1.36ÅAromatic
C13C5doub1.39Å1.41ÅAromatic
C12F1sing1.35Å1.36Å
O3C6sing1.43Å1.46Å
O3C5sing1.36Å1.37Å
C14C15doub1.39Å1.39ÅAromatic
C5C4sing1.40Å1.37ÅAromatic
O1C1doub1.21Å1.24Å
C15C1sing1.48Å1.41Å
C15C3sing1.41Å1.40ÅAromatic
C4C3doub1.38Å1.41ÅAromatic
C1N1sing1.35Å1.35Å
C3C2sing1.48Å1.43Å
N1N2doub1.23Å1.41Å
C2N2sing1.35Å1.34Å
C2O2doub1.21Å1.25Å
C4H1sing1.08Å1.08Å
C14H2sing1.08Å1.08Å
C6H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C11H5sing1.08Å1.08Å
C8H6sing1.08Å1.08Å
C9H7sing1.08Å1.08Å
C10H8sing1.08Å1.08Å
C13H9sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C10C9C8120.3°120.0°
C9C10C11120.3°120.0°
C10C9H7119.8°119.9°
C9C10H8119.9°120.0°
C9C8C7120.7°120.0°
C9C8H6119.7°120.0°
C8C9H7119.9°120.0°
C10C11C12118.8°120.0°
C10C11H5120.6°120.0°
C11C10H8119.9°120.0°
C8C7C12116.7°120.0°
C8C7C6122.1°120.0°
C7C8H6119.6°120.0°
C11C12C7123.2°120.0°
C11C12F1118.0°120.0°
C12C11H5120.6°120.1°
C12C7C6121.2°120.0°
C7C12F1118.8°120.0°
C7C6O3108.8°109.5°
C7C6H3109.6°109.5°
C7C6H4109.6°109.5°
C14C13C5119.9°120.6°
C13C14C15120.6°119.4°
C13C14H2119.7°120.3°
C14C13H9120.1°119.7°
C13C5O3117.7°119.8°
C13C5C4120.3°120.5°
C5C13H9120.0°119.7°
C6O3C5117.1°117.0°
O3C6H3109.6°109.5°
O3C6H4109.7°109.4°
O3C5C4122.0°119.7°
C14C15C1120.0°122.9°
C14C15C3120.2°120.1°
C15C14H2119.7°120.3°
C5C4C3120.1°119.3°
C5C4H1120.0°120.4°
O1C1C15123.7°120.6°
O1C1N1118.8°120.7°
C1C15C3119.8°116.9°
C15C1N1117.4°118.7°
C15C3C4118.9°120.1°
C15C3C2120.9°116.9°
C4C3C2120.2°123.0°
C3C4H1119.9°120.4°
C1N1N2123.0°124.5°
C3C2N2117.8°118.6°
C3C2O2123.8°120.7°
N1N2C2121.0°124.3°
N2C2O2118.4°120.7°
H3C6H4109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C10C9C8H7180.0°179.4°
C9C10C11H8180.0°180.0°
C10C9C8C70.6°0.9°
C9C10C11C121.1°0.0°
C9C10C11H5178.9°179.7°
C10C9C8H6179.4°179.7°
C8C9C10C110.6°0.6°
C9C8C7H6180.0°179.5°
C9C8C7C121.1°0.5°
C9C8C7C6179.5°179.4°
C8C9C10H8179.4°179.4°
C10C11C12H5180.0°179.7°
C10C11C12C71.6°0.3°
C10C11C12F1178.5°179.7°
C11C10C9H7179.4°180.0°
C8C7C12C111.6°0.0°
C8C7C12C6179.5°180.0°
C8C7C12F1178.5°180.0°
C8C7C6O349.3°0.1°
C8C7C6H370.5°120.0°
C8C7C6H4169.2°120.0°
C7C8C9H7179.4°179.7°
C11C12C7F1179.9°180.0°
C11C12C7C6178.9°180.0°
C12C11C10H8178.9°180.0°
C12C7C6O3131.2°180.0°
C12C7C6H3108.9°60.0°
C12C7C6H411.3°60.1°
C7C12C11H5178.4°180.0°
C12C7C8H6178.9°180.0°
C6C7C12F10.9°0.0°
C7C6O3H3119.9°120.0°
C7C6O3H4119.9°119.9°
C7C6O3C5157.0°180.0°
C7C6H3H4120.3°120.0°
C6C7C8H60.5°0.0°
C14C13C5H9180.0°180.0°
C14C13C5O3178.4°180.0°
C13C14C15H2180.0°179.9°
C14C13C5C43.0°0.0°
C13C14C15C1178.8°180.0°
C13C14C15C30.6°0.5°
C13C5O3C6153.6°0.0°
C13C5O3C4178.6°180.0°
C5C13C14C152.5°0.2°
C13C5C4C31.5°0.1°
C13C5C4H1178.5°179.8°
C5C13C14H2177.5°179.7°
F1C12C11H51.5°0.0°
C6O3C5C427.8°180.0°
O3C6H3H4120.3°120.0°
O3C5C4C3179.9°180.0°
O3C5C4H10.1°0.3°
C5O3C6H337.1°60.0°
C5O3C6H483.1°60.0°
O3C5C13H91.6°0.0°
C14C15C1O10.9°0.5°
C14C15C1C3178.3°179.5°
C14C15C3C40.9°0.5°
C14C15C1N1178.4°179.5°
C14C15C3C2180.0°179.6°
C15C14C13H9177.5°179.8°
C5C4C3C150.4°0.3°
C5C4C3H1180.0°179.7°
C5C4C3C2179.6°179.8°
C4C5C13H9177.1°180.0°
O1C1C15N1177.4°180.0°
O1C1C15C3177.3°180.0°
O1C1N1N2179.7°180.0°
C1C15C3C4177.4°179.9°
C1C15C3C21.8°0.0°
C15C1N1N22.7°0.0°
C1C15C14H21.2°0.1°
C15C3C4C2179.1°179.9°
C3C15C1N10.1°0.0°
C15C3C2N20.6°0.1°
C15C3C2O2178.1°180.0°
C15C3C4H1179.6°180.0°
C3C15C14H2179.4°179.4°
C4C3C2N2178.5°180.0°
C4C3C2O22.8°0.1°
C1N1N2C24.0°0.0°
C3C2N2N12.2°0.0°
C3C2N2O2178.7°180.0°
C2C3C4H10.4°0.1°
N1N2C2O2179.1°180.0°
H2C14C13H92.5°0.3°
H5C11C10H81.1°0.3°
H6C8C9H70.6°0.3°
H7C9C10H80.6°0.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon