8CS
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O4' | C4' | doub | 1.22Å | 1.25Å | |
| C4' | N3' | sing | 1.35Å | 1.34Å | |
| C4' | C4A | sing | 1.40Å | 1.49Å | |
| C4A | N5' | sing | 1.41Å | 1.36Å | |
| C4A | C4B | doub | 1.39Å | 1.48Å | |
| N5' | C6' | sing | 1.47Å | 1.46Å | |
| N5' | HN5' | sing | 0.97Å | 1.00Å | |
| N3' | C2' | sing | 1.36Å | 1.34Å | |
| N3' | HN3' | sing | 0.97Å | 1.00Å | |
| C2' | N2' | sing | 1.37Å | 1.35Å | |
| C2' | N1' | doub | 1.32Å | 1.35Å | |
| N2' | H2'1 | sing | 0.97Å | 1.00Å | |
| N2' | H2'2 | sing | 0.97Å | 1.00Å | |
| N1' | C4B | sing | 1.34Å | 1.35Å | |
| C4B | N8' | sing | 1.39Å | 1.34Å | |
| N8' | C7 | sing | 1.47Å | 1.45Å | |
| N8' | HN8' | sing | 0.97Å | 1.00Å | |
| C7 | C6' | sing | 1.54Å | 1.53Å | |
| C7 | O9' | sing | 1.43Å | 1.43Å | |
| C7 | H7 | sing | 1.09Å | 1.10Å | |
| C6' | C7' | sing | 1.52Å | 1.50Å | |
| C6' | H6' | sing | 1.09Å | 1.10Å | |
| C7' | C8' | sing | 1.52Å | 1.50Å | |
| C7' | O10 | doub | 1.21Å | 1.21Å | |
| C8' | O3 | sing | 1.44Å | 1.44Å | |
| C8' | C9' | sing | 1.53Å | 1.53Å | |
| C8' | H8' | sing | 1.09Å | 1.10Å | |
| O3 | P | sing | 1.62Å | 1.62Å | |
| O9' | C9' | sing | 1.43Å | 1.43Å | |
| C9' | C10 | sing | 1.52Å | 1.53Å | |
| C9' | H9' | sing | 1.09Å | 1.10Å | |
| C10 | O1 | sing | 1.44Å | 1.42Å | |
| C10 | H101 | sing | 1.09Å | 1.10Å | |
| C10 | H102 | sing | 1.09Å | 1.10Å | |
| O1 | P | sing | 1.63Å | 1.60Å | |
| P | O2 | doub | 1.48Å | 1.51Å | |
| P | O4 | sing | 1.61Å | 1.51Å | |
| O4 | HO4 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O4' | C4' | N3' | 118.7° | 120.7° |
| O4' | C4' | C4A | 122.8° | 120.7° |
| N3' | C4' | C4A | 118.6° | 118.6° |
| C4' | N3' | C2' | 122.3° | 120.1° |
| C4' | N3' | HN3' | 118.9° | 120.0° |
| C4' | C4A | N5' | 125.5° | 120.9° |
| C4' | C4A | C4B | 115.6° | 119.0° |
| N5' | C4A | C4B | 118.9° | 120.1° |
| C4A | N5' | C6' | 117.6° | 118.8° |
| C4A | N5' | HN5' | 106.9° | 120.6° |
| C4A | C4B | N1' | 119.5° | 119.6° |
| C4A | C4B | N8' | 120.6° | 119.7° |
| C6' | N5' | HN5' | 106.8° | 120.6° |
| N5' | C6' | C7 | 111.0° | 108.2° |
| N5' | C6' | C7' | 114.3° | 108.2° |
| N5' | C6' | H6' | 104.1° | 110.6° |
| C2' | N3' | HN3' | 118.8° | 119.9° |
| N3' | C2' | N2' | 119.1° | 119.2° |
| N3' | C2' | N1' | 122.8° | 121.6° |
| N2' | C2' | N1' | 118.1° | 119.2° |
| C2' | N2' | H2'1 | 110.0° | 120.1° |
| C2' | N2' | H2'2 | 125.0° | 119.9° |
| C2' | N1' | C4B | 121.3° | 121.0° |
| H2'1 | N2' | H2'2 | 125.0° | 120.0° |
| N1' | C4B | N8' | 120.0° | 120.6° |
| C4B | N8' | C7 | 121.4° | 119.4° |
| C4B | N8' | HN8' | 105.7° | 120.3° |
| C7 | N8' | HN8' | 105.6° | 120.3° |
| N8' | C7 | C6' | 112.0° | 108.8° |
| N8' | C7 | O9' | 107.2° | 109.8° |
| N8' | C7 | H7 | 109.6° | 109.5° |
| C6' | C7 | O9' | 110.3° | 109.6° |
| C6' | C7 | H7 | 106.5° | 109.5° |
| C7 | C6' | C7' | 106.5° | 108.1° |
| C7 | C6' | H6' | 112.2° | 110.6° |
| O9' | C7 | H7 | 111.3° | 109.7° |
| C7 | O9' | C9' | 112.8° | 114.3° |
| C7' | C6' | H6' | 108.8° | 111.1° |
| C6' | C7' | C8' | 119.5° | 117.0° |
| C6' | C7' | O10 | 121.1° | 121.5° |
| C8' | C7' | O10 | 119.4° | 121.4° |
| C7' | C8' | O3 | 111.4° | 107.3° |
| C7' | C8' | C9' | 107.0° | 107.4° |
| C7' | C8' | H8' | 110.4° | 110.8° |
| O3 | C8' | C9' | 111.2° | 109.1° |
| O3 | C8' | H8' | 106.2° | 110.7° |
| C8' | O3 | P | 120.7° | 119.5° |
| C9' | C8' | H8' | 110.6° | 111.3° |
| C8' | C9' | O9' | 110.0° | 109.5° |
| C8' | C9' | C10 | 110.8° | 111.8° |
| C8' | C9' | H9' | 108.3° | 108.4° |
| O3 | P | O1 | 100.2° | 105.6° |
| O3 | P | O2 | 111.3° | 110.2° |
| O3 | P | O4 | 106.3° | 110.2° |
| O9' | C9' | C10 | 109.7° | 110.8° |
| O9' | C9' | H9' | 109.4° | 108.3° |
| C10 | C9' | H9' | 108.6° | 107.9° |
| C9' | C10 | O1 | 110.0° | 109.6° |
| C9' | C10 | H101 | 109.3° | 109.5° |
| C9' | C10 | H102 | 109.1° | 109.5° |
| O1 | C10 | H101 | 109.3° | 109.4° |
| O1 | C10 | H102 | 109.2° | 109.4° |
| C10 | O1 | P | 118.3° | 118.7° |
| H101 | C10 | H102 | 109.9° | 109.5° |
| O1 | P | O2 | 107.3° | 110.2° |
| O1 | P | O4 | 107.1° | 110.2° |
| O2 | P | O4 | 122.3° | 110.3° |
| P | O4 | HO4 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O4' | C4' | N3' | C4A | 179.8° | 179.8° |
| O4' | C4' | C4A | N5' | 0.2° | 0.2° |
| O4' | C4' | C4A | C4B | 179.8° | 180.0° |
| O4' | C4' | N3' | C2' | 179.9° | 179.7° |
| O4' | C4' | N3' | HN3' | 0.2° | 0.2° |
| N3' | C4' | C4A | N5' | 180.0° | 179.5° |
| N3' | C4' | C4A | C4B | 0.5° | 0.2° |
| C4' | N3' | C2' | HN3' | 180.0° | 179.9° |
| C4' | N3' | C2' | N2' | 180.0° | 179.7° |
| C4' | N3' | C2' | N1' | 0.3° | 0.3° |
| C4' | C4A | N5' | C4B | 179.5° | 179.8° |
| C4' | C4A | N5' | C6' | 156.8° | 164.1° |
| C4' | C4A | N5' | HN5' | 36.9° | 15.8° |
| C4A | C4' | N3' | C2' | 0.1° | 0.1° |
| C4A | C4' | N3' | HN3' | 179.9° | 180.0° |
| C4' | C4A | C4B | N1' | 0.5° | 0.3° |
| C4' | C4A | C4B | N8' | 179.7° | 179.4° |
| C4A | N5' | C6' | HN5' | 120.0° | 179.9° |
| N5' | C4A | C4B | N1' | 179.9° | 179.5° |
| N5' | C4A | C4B | N8' | 0.7° | 0.8° |
| C4A | N5' | C6' | C7 | 46.2° | 43.3° |
| C4A | N5' | C6' | C7' | 166.7° | 160.2° |
| C4A | N5' | C6' | H6' | 74.8° | 78.0° |
| C4B | C4A | N5' | C6' | 22.7° | 16.2° |
| C4B | C4A | N5' | HN5' | 142.7° | 164.0° |
| C4A | C4B | N1' | C2' | 0.2° | 0.0° |
| C4A | C4B | N1' | N8' | 179.2° | 179.7° |
| C4A | C4B | N8' | C7 | 2.7° | 17.1° |
| C4A | C4B | N8' | HN8' | 122.7° | 162.9° |
| N5' | C6' | C7 | N8' | 46.9° | 55.0° |
| N5' | C6' | C7 | C7' | 125.0° | 117.0° |
| N5' | C6' | C7 | H6' | 116.0° | 121.3° |
| N5' | C6' | C7 | O9' | 72.4° | 65.0° |
| N5' | C6' | C7 | H7 | 166.7° | 174.7° |
| N5' | C6' | C7' | H6' | 115.9° | 121.6° |
| N5' | C6' | C7' | C8' | 74.6° | 67.7° |
| N5' | C6' | C7' | O10 | 107.4° | 112.4° |
| HN5' | N5' | C6' | C7 | 166.2° | 136.8° |
| HN5' | N5' | C6' | C7' | 73.3° | 20.0° |
| HN5' | N5' | C6' | H6' | 45.3° | 101.9° |
| N3' | C2' | N2' | N1' | 179.7° | 180.0° |
| N3' | C2' | N2' | H2'1 | 180.0° | 0.0° |
| N3' | C2' | N2' | H2'2 | 0.0° | 180.0° |
| N3' | C2' | N1' | C4B | 0.2° | 0.3° |
| HN3' | N3' | C2' | N2' | 0.0° | 0.2° |
| HN3' | N3' | C2' | N1' | 179.7° | 179.7° |
| C2' | N2' | H2'1 | H2'2 | 180.0° | 180.0° |
| N2' | C2' | N1' | C4B | 179.9° | 179.8° |
| N1' | C2' | N2' | H2'1 | 0.3° | 180.0° |
| N1' | C2' | N2' | H2'2 | 179.7° | 0.0° |
| C2' | N1' | C4B | N8' | 179.4° | 179.7° |
| N1' | C4B | N8' | C7 | 176.5° | 163.1° |
| N1' | C4B | N8' | HN8' | 56.5° | 16.8° |
| C4B | N8' | C7 | HN8' | 120.0° | 180.0° |
| C4B | N8' | C7 | C6' | 26.8° | 44.8° |
| C4B | N8' | C7 | O9' | 94.2° | 75.1° |
| C4B | N8' | C7 | H7 | 144.8° | 164.5° |
| N8' | C7 | C6' | O9' | 119.3° | 120.0° |
| N8' | C7 | C6' | H7 | 119.8° | 119.7° |
| N8' | C7 | O9' | H7 | 119.8° | 120.3° |
| N8' | C7 | C6' | C7' | 171.8° | 172.0° |
| N8' | C7 | C6' | H6' | 69.2° | 66.3° |
| N8' | C7 | O9' | C9' | 172.3° | 176.6° |
| HN8' | N8' | C7 | C6' | 146.8° | 135.3° |
| HN8' | N8' | C7 | O9' | 25.8° | 104.9° |
| HN8' | N8' | C7 | H7 | 95.2° | 15.6° |
| C6' | C7 | O9' | H7 | 118.0° | 120.2° |
| C7 | C6' | C7' | H6' | 121.2° | 121.5° |
| C7 | C6' | C7' | C8' | 48.4° | 49.3° |
| C7 | C6' | C7' | O10 | 129.7° | 130.7° |
| C6' | C7 | O9' | C9' | 65.5° | 64.0° |
| O9' | C7 | C6' | C7' | 52.5° | 52.0° |
| O9' | C7 | C6' | H6' | 171.5° | 173.7° |
| C7 | O9' | C9' | C8' | 65.3° | 65.3° |
| C7 | O9' | C9' | C10 | 172.6° | 171.0° |
| C7 | O9' | C9' | H9' | 53.5° | 52.8° |
| H7 | C7 | C6' | C7' | 68.4° | 68.4° |
| H7 | C7 | C6' | H6' | 50.6° | 53.4° |
| H7 | C7 | O9' | C9' | 52.5° | 56.2° |
| C6' | C7' | C8' | O10 | 178.1° | 180.0° |
| C6' | C7' | C8' | O3 | 73.2° | 67.1° |
| C6' | C7' | C8' | C9' | 48.5° | 50.1° |
| C6' | C7' | C8' | H8' | 169.0° | 171.9° |
| H6' | C6' | C7' | C8' | 169.5° | 170.7° |
| H6' | C6' | C7' | O10 | 8.5° | 9.2° |
| C7' | C8' | O3 | C9' | 119.3° | 116.1° |
| C7' | C8' | O3 | H8' | 120.3° | 121.1° |
| C7' | C8' | C9' | H8' | 120.4° | 121.5° |
| C7' | C8' | O3 | P | 171.1° | 167.6° |
| C7' | C8' | C9' | O9' | 52.5° | 53.9° |
| C7' | C8' | C9' | C10 | 174.0° | 177.0° |
| C7' | C8' | C9' | H9' | 67.0° | 64.1° |
| O10 | C7' | C8' | O3 | 108.8° | 112.9° |
| O10 | C7' | C8' | C9' | 129.5° | 129.9° |
| O10 | C7' | C8' | H8' | 9.0° | 8.1° |
| O3 | C8' | C9' | H8' | 117.8° | 122.5° |
| O3 | C8' | C9' | O9' | 69.3° | 62.2° |
| O3 | C8' | C9' | C10 | 52.2° | 61.0° |
| O3 | C8' | C9' | H9' | 171.2° | 179.8° |
| C8' | O3 | P | O1 | 47.1° | 39.3° |
| C8' | O3 | P | O2 | 160.3° | 158.3° |
| C8' | O3 | P | O4 | 64.3° | 79.7° |
| C9' | C8' | O3 | P | 51.8° | 51.6° |
| C8' | C9' | O9' | C10 | 122.1° | 123.8° |
| C8' | C9' | O9' | H9' | 118.8° | 118.0° |
| C8' | C9' | C10 | H9' | 118.8° | 119.1° |
| C8' | C9' | C10 | O1 | 57.2° | 61.8° |
| C8' | C9' | C10 | H101 | 177.2° | 178.1° |
| C8' | C9' | C10 | H102 | 62.5° | 58.1° |
| H8' | C8' | O3 | P | 68.6° | 71.3° |
| H8' | C8' | C9' | O9' | 172.9° | 175.3° |
| H8' | C8' | C9' | C10 | 65.6° | 61.5° |
| H8' | C8' | C9' | H9' | 53.4° | 57.3° |
| O3 | P | O1 | C10 | 51.8° | 39.5° |
| O3 | P | O1 | O2 | 116.2° | 119.0° |
| O3 | P | O1 | O4 | 110.7° | 119.1° |
| O3 | P | O2 | O4 | 127.1° | 121.9° |
| O3 | P | O4 | HO4 | 60.6° | 180.0° |
| O9' | C9' | C10 | H9' | 119.5° | 118.4° |
| O9' | C9' | C10 | O1 | 64.4° | 60.6° |
| O9' | C9' | C10 | H101 | 55.6° | 59.4° |
| O9' | C9' | C10 | H102 | 175.8° | 179.4° |
| C9' | C10 | O1 | H101 | 120.0° | 120.1° |
| C9' | C10 | O1 | H102 | 119.7° | 120.0° |
| C9' | C10 | H101 | H102 | 119.8° | 120.0° |
| C9' | C10 | O1 | P | 61.8° | 52.6° |
| H9' | C9' | C10 | O1 | 176.1° | 179.1° |
| H9' | C9' | C10 | H101 | 63.9° | 59.0° |
| H9' | C9' | C10 | H102 | 56.3° | 61.0° |
| O1 | C10 | H101 | H102 | 119.8° | 119.9° |
| C10 | O1 | P | O2 | 168.1° | 158.5° |
| C10 | O1 | P | O4 | 58.9° | 79.6° |
| H101 | C10 | O1 | P | 178.2° | 172.7° |
| H102 | C10 | O1 | P | 57.9° | 67.4° |
| O1 | P | O2 | O4 | 124.2° | 121.9° |
| O1 | P | O4 | HO4 | 45.8° | 63.8° |
| O2 | P | O4 | HO4 | 170.1° | 58.1° |
