Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8BX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C02N01doub1.32Å1.37ÅAromatic
C06N01sing1.32Å1.36ÅAromatic
C03C02sing1.39Å1.40ÅAromatic
C02N02sing1.39Å1.37Å
N02HN02sing0.97Å1.00Å
N02HN0Asing0.97Å1.00Å
C04C03doub1.38Å1.40ÅAromatic
C03H03sing1.08Å1.08Å
C07C04sing1.51Å1.51Å
C04C05sing1.39Å1.40ÅAromatic
C05C06doub1.38Å1.40ÅAromatic
C05H05sing1.08Å1.08Å
C06C08sing1.51Å1.53Å
C07H07sing1.09Å1.10Å
C07H07Asing1.09Å1.10Å
C07H07Bsing1.09Å1.10Å
C3'C08sing1.53Å1.54Å
C08H08sing1.09Å1.10Å
C08H08Asing1.09Å1.10Å
C4'O09sing1.43Å1.43Å
O09C10sing1.43Å1.43Å
N1'C2'sing1.49Å1.47Å
N1'C5'sing1.49Å1.46Å
N1'HN1'sing1.01Å1.00Å
C10C11sing1.53Å1.52Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
N12C11sing1.47Å1.45Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
N12C13sing1.47Å1.46Å
N12HN12sing1.01Å1.00Å
C13C14sing1.53Å1.54Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
F16C14sing1.40Å1.33Å
C14C21sing1.51Å1.51Å
C14F15sing1.40Å1.32Å
C2'C3'sing1.54Å1.54Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C26C21doub1.38Å1.38ÅAromatic
C21C22sing1.38Å1.41ÅAromatic
C22C23doub1.38Å1.37ÅAromatic
C22CL22sing1.74Å1.79Å
C24C23sing1.38Å1.38ÅAromatic
C23H23sing1.08Å1.08Å
C25C24doub1.38Å1.38ÅAromatic
C24H24sing1.08Å1.08Å
C26C25sing1.38Å1.37ÅAromatic
C25H25sing1.08Å1.08Å
C26H26sing1.08Å1.08Å
C3'C4'sing1.54Å1.53Å
C3'H3'sing1.09Å1.10Å
C5'C4'sing1.54Å1.54Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C02N01C06122.5°121.7°
N01C02C03118.8°120.6°
N01C02N02121.7°119.8°
N01C06C05119.6°120.8°
N01C06C08119.6°119.6°
C03C02N02119.5°119.6°
C02C03C04120.0°119.1°
C02C03H03120.0°120.5°
C02N02HN02109.5°119.9°
C02N02HN0A109.5°120.0°
HN02N02HN0A109.4°120.0°
C04C03H03120.0°120.4°
C03C04C07119.4°120.8°
C03C04C05119.6°118.5°
C07C04C05121.0°120.8°
C04C07H07109.5°109.5°
C04C07H07A109.4°109.4°
C04C07H07B109.5°109.5°
C04C05C06119.5°119.3°
C04C05H05120.2°120.3°
C06C05H05120.3°120.4°
C05C06C08120.9°119.5°
C06C08C3'112.4°109.4°
C06C08H08108.5°109.4°
C06C08H08A108.5°109.5°
H07C07H07A109.4°109.5°
H07C07H07B109.5°109.5°
H07AC07H07B109.5°109.5°
C3'C08H08108.5°109.5°
C3'C08H08A108.5°109.5°
C08C3'C2'114.3°110.3°
C08C3'C4'115.1°110.3°
C08C3'H3'100.0°110.3°
H08C08H08A110.4°109.5°
C4'O09C10119.8°114.0°
O09C4'C3'107.9°110.4°
O09C4'C5'111.5°110.3°
O09C4'H4'107.3°110.3°
O09C10C11108.5°109.5°
O09C10H10109.8°109.4°
O09C10H10A109.8°109.5°
C2'N1'C5'111.7°104.2°
C2'N1'HN1'108.7°111.0°
N1'C2'C3'103.9°104.6°
N1'C2'H2'111.3°110.4°
N1'C2'H2'A111.4°110.3°
C5'N1'HN1'108.7°111.0°
N1'C5'C4'104.0°104.6°
N1'C5'H5'111.3°110.4°
N1'C5'H5'A111.3°110.4°
C11C10H10109.8°109.5°
C11C10H10A109.8°109.5°
C10C11N12117.2°109.5°
C10C11H11106.9°109.5°
C10C11H11A106.9°109.5°
H10C10H10A109.1°109.5°
N12C11H11107.0°109.4°
N12C11H11A107.0°109.4°
C11N12C13118.7°111.0°
C11N12HN12106.5°111.0°
H11C11H11A111.9°109.5°
C13N12HN12106.5°111.0°
N12C13C14111.5°109.5°
N12C13H13108.8°109.5°
N12C13H13A108.8°109.5°
C14C13H13108.8°109.5°
C14C13H13A108.8°109.5°
C13C14F16107.5°109.5°
C13C14C21114.4°109.5°
C13C14F15109.6°109.4°
H13C13H13A110.1°109.5°
F16C14C21112.5°109.5°
F16C14F15111.4°109.5°
C21C14F15101.5°109.5°
C14C21C26116.3°120.0°
C14C21C22124.5°120.0°
C3'C2'H2'111.4°110.5°
C3'C2'H2'A111.3°110.4°
C2'C3'C4'102.6°105.1°
C2'C3'H3'113.1°110.3°
H2'C2'H2'A107.5°110.5°
C26C21C22119.2°120.0°
C21C26C25120.8°120.0°
C21C26H26119.6°120.0°
C21C22C23119.8°119.9°
C21C22CL22127.8°120.0°
C23C22CL22112.5°120.0°
C22C23C24119.6°120.0°
C22C23H23120.2°120.0°
C24C23H23120.2°120.0°
C23C24C25120.9°120.0°
C23C24H24119.5°119.9°
C25C24H24119.6°120.0°
C24C25C26119.6°120.0°
C24C25H25120.2°120.0°
C26C25H25120.2°120.0°
C25C26H26119.6°120.0°
C4'C3'H3'112.3°110.4°
C3'C4'C5'102.8°105.1°
C3'C4'H4'115.3°110.3°
C5'C4'H4'112.0°110.4°
C4'C5'H5'111.4°110.4°
C4'C5'H5'A111.3°110.4°
H5'C5'H5'A107.5°110.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N01C02C03N02179.8°179.9°
N01C02N02HN020.0°0.1°
N01C02N02HN0A120.0°180.0°
N01C02C03C040.3°0.0°
N01C02C03H03179.7°180.0°
C02N01C06C051.5°0.0°
C02N01C06C08179.5°180.0°
C06N01C02C030.9°0.0°
C06N01C02N02179.3°180.0°
N01C06C05C041.5°0.1°
N01C06C05C08179.0°180.0°
N01C06C05H05178.5°179.9°
N01C06C08C3'118.0°55.0°
N01C06C08H08122.0°65.0°
N01C06C08H08A2.0°175.0°
C03C02N02HN02179.8°180.0°
C03C02N02HN0A59.8°0.1°
C02C03C04H03180.0°180.0°
C02C03C04C07179.7°180.0°
C02C03C04C050.3°0.1°
C02N02HN02HN0A120.0°179.9°
N02C02C03C04179.9°180.0°
N02C02C03H030.1°0.0°
C03C04C07C05179.9°179.9°
C03C04C05C060.9°0.1°
C03C04C05H05179.1°179.9°
C03C04C07H0790.0°90.0°
C03C04C07H07A150.0°150.0°
C03C04C07H07B30.0°30.1°
H03C03C04C070.3°0.0°
H03C03C04C05179.7°180.0°
C07C04C05C06179.1°180.0°
C07C04C05H050.8°0.0°
C04C07H07H07A120.0°120.0°
C04C07H07H07B120.0°120.0°
C04C07H07AH07B120.0°120.0°
C04C05C06H05180.0°180.0°
C04C05C06C08179.5°180.0°
C05C04C07H0789.9°90.0°
C05C04C07H07A30.0°30.0°
C05C04C07H07B150.1°150.0°
C05C06C08C3'63.1°125.0°
C05C06C08H0856.9°115.1°
C05C06C08H08A176.9°5.0°
H05C05C06C080.4°0.0°
C06C08C3'H08120.0°119.9°
C06C08C3'H08A120.0°120.0°
C06C08H08H08A118.8°120.1°
C06C08C3'C2'71.5°66.5°
C06C08C3'C4'170.1°177.9°
C06C08C3'H3'49.6°55.7°
H07C07H07AH07B120.0°120.0°
C3'C08H08H08A118.8°120.0°
C08C3'C4'O0945.4°0.0°
C08C3'C2'N1'157.5°142.7°
C08C3'C2'C4'125.3°118.9°
C08C3'C2'H3'113.6°122.2°
C08C3'C2'H2'82.5°98.5°
C08C3'C2'H2'A37.4°24.0°
C08C3'C4'H3'113.5°122.2°
C08C3'C4'C5'163.3°118.9°
C08C3'C4'H4'74.5°122.1°
H08C08C3'C2'168.4°173.6°
H08C08C3'C4'50.1°57.9°
H08C08C3'H3'70.4°64.2°
H08AC08C3'C2'48.5°53.6°
H08AC08C3'C4'69.9°62.1°
H08AC08C3'H3'169.6°175.7°
O09C4'C5'N1'84.7°142.8°
C4'O09C10C11173.3°180.0°
C4'O09C10H1053.3°60.1°
C4'O09C10H10A66.7°59.9°
O09C4'C3'C2'79.3°118.9°
O09C4'C3'C5'117.9°118.9°
O09C4'C3'H4'119.9°122.2°
O09C4'C3'H3'158.9°122.2°
O09C4'C5'H4'120.2°122.1°
O09C4'C5'H5'35.3°24.0°
O09C4'C5'H5'A155.3°98.5°
O09C10C11H10120.0°119.9°
O09C10C11H10A120.0°120.0°
O09C10H10H10A120.4°120.0°
O09C10C11N12106.0°65.0°
O09C10C11H11134.0°175.1°
O09C10C11H11A14.0°55.0°
C10O09C4'C3'174.0°150.0°
C10O09C4'C5'61.8°94.4°
C10O09C4'H4'61.1°27.8°
C2'N1'C5'HN1'120.0°119.6°
N1'C2'C3'H2'120.0°118.8°
N1'C2'C3'H2'A120.0°118.7°
N1'C2'H2'H2'A122.3°122.3°
N1'C2'C3'C4'32.2°23.8°
N1'C2'C3'H3'89.0°95.1°
C2'N1'C5'C4'10.8°39.4°
C2'N1'C5'H5'130.8°79.3°
C2'N1'C5'H5'A109.2°158.3°
C5'N1'C2'C3'13.5°39.4°
C5'N1'C2'H2'133.5°158.3°
C5'N1'C2'H2'A106.5°79.3°
N1'C5'C4'C3'30.7°23.8°
N1'C5'C4'H5'120.0°118.8°
N1'C5'C4'H5'A120.0°118.8°
N1'C5'C4'H4'155.1°95.1°
N1'C5'H5'H5'A122.2°122.4°
HN1'N1'C2'C3'133.4°159.0°
HN1'N1'C2'H2'106.5°82.2°
HN1'N1'C2'H2'A13.5°40.3°
HN1'N1'C5'C4'109.2°159.0°
HN1'N1'C5'H5'10.8°40.2°
HN1'N1'C5'H5'A130.8°82.2°
C11C10H10H10A120.4°120.0°
C10C11N12H11120.0°120.0°
C10C11N12H11A120.0°120.0°
C10C11H11H11A116.8°120.1°
C10C11N12C13146.1°180.0°
C10C11N12HN1293.9°56.0°
H10C10C11N1214.1°55.0°
H10C10C11H11105.9°65.0°
H10C10C11H11A134.1°175.0°
H10AC10C11N12134.0°175.0°
H10AC10C11H1114.0°55.0°
H10AC10C11H11A106.0°65.0°
N12C11H11H11A116.9°119.9°
C11N12C13HN12120.0°124.0°
C11N12C13C14109.6°180.0°
C11N12C13H13130.3°60.0°
C11N12C13H13A10.4°60.0°
H11C11N12C1326.1°60.0°
H11C11N12HN12146.1°176.0°
H11AC11N12C1393.9°60.0°
H11AC11N12HN1226.1°64.0°
N12C13C14H13120.0°120.0°
N12C13C14H13A120.0°120.0°
N12C13H13H13A119.2°120.0°
N12C13C14F1614.3°60.0°
N12C13C14C21139.9°180.0°
N12C13C14F15106.9°60.0°
HN12N12C13C1410.3°56.1°
HN12N12C13H13109.7°176.1°
HN12N12C13H13A130.4°63.9°
C14C13H13H13A119.1°120.0°
C13C14F16C21126.8°120.0°
C13C14F16F15120.0°119.9°
C13C14C21F15117.9°119.9°
C13C14C21C2651.7°0.3°
C13C14C21C22128.0°180.0°
H13C13C14F16105.8°60.0°
H13C13C14C2119.9°60.0°
H13C13C14F15133.1°180.0°
H13AC13C14F16134.3°180.0°
H13AC13C14C21100.0°60.0°
H13AC13C14F1513.1°60.0°
F16C14C21F15119.1°120.0°
F16C14C21C2671.3°119.7°
F16C14C21C22109.0°60.0°
C14C21C26C22179.6°179.7°
C14C21C22C23179.6°179.9°
C14C21C22CL220.4°0.0°
C14C21C26C25179.5°179.8°
C14C21C26H260.5°0.0°
F15C14C21C26169.6°120.2°
F15C14C21C2210.1°60.0°
C3'C2'H2'H2'A122.2°122.5°
C2'C3'C4'H3'121.7°118.9°
C2'C3'C4'C5'38.6°0.0°
C2'C3'C4'H4'160.8°119.0°
H2'C2'C3'C4'152.2°142.6°
H2'C2'C3'H3'31.0°23.7°
H2'AC2'C3'C4'87.8°94.9°
H2'AC2'C3'H3'151.0°146.2°
C26C21C22C230.0°0.2°
C26C21C22CL22180.0°179.7°
C21C26C25C240.2°0.6°
C21C26C25H26180.0°179.8°
C21C26C25H25179.8°179.7°
C21C22C23CL22180.0°179.9°
C21C22C23C240.5°0.1°
C21C22C23H23179.5°180.0°
C22C21C26C250.2°0.5°
C22C21C26H26179.8°179.7°
C22C23C24H23180.0°179.9°
C22C23C24C250.9°0.0°
C22C23C24H24179.1°179.9°
CL22C22C23C24179.5°180.0°
CL22C22C23H230.5°0.1°
C23C24C25H24180.0°179.9°
C23C24C25C260.8°0.3°
C23C24C25H25179.2°180.0°
H23C23C24C25179.1°179.9°
H23C23C24H240.9°0.0°
C24C25C26H25180.0°179.7°
C24C25C26H26179.8°179.7°
H24C24C25C26179.2°179.8°
H24C24C25H250.8°0.0°
H25C25C26H260.2°0.0°
C3'C4'C5'H4'124.4°118.9°
C3'C4'C5'H5'150.6°94.9°
C3'C4'C5'H5'A89.4°142.6°
H3'C3'C4'C5'83.1°118.9°
H3'C3'C4'H4'39.0°0.0°
C4'C5'H5'H5'A122.2°122.5°
H4'C4'C5'H5'85.0°146.1°
H4'C4'C5'H5'A35.0°23.7°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon