8AH
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O3' | C3' | sing | 1.43Å | 1.50Å | |
| C4' | O4' | sing | 1.44Å | 1.61Å | |
| C4' | C3' | sing | 1.54Å | 1.31Å | |
| C4' | C5' | sing | 1.53Å | 1.50Å | |
| O5' | C5' | sing | 1.43Å | 1.41Å | |
| O5' | P | sing | 1.61Å | 1.66Å | |
| O4' | C1' | sing | 1.44Å | 1.26Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| OP2 | P | sing | 1.61Å | 1.49Å | |
| CM8 | C8 | sing | 1.51Å | 1.52Å | |
| C1' | C2' | sing | 1.55Å | 1.54Å | |
| C1' | N9 | sing | 1.46Å | 1.47Å | |
| P | OP1 | doub | 1.48Å | 1.48Å | |
| C2' | O2' | sing | 1.43Å | 1.36Å | |
| C8 | N9 | sing | 1.36Å | 1.31Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.30Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.34Å | Aromatic |
| N7 | C5 | sing | 1.35Å | 1.33Å | Aromatic |
| C4 | N3 | doub | 1.33Å | 1.35Å | Aromatic |
| C4 | C5 | sing | 1.40Å | 1.36Å | Aromatic |
| N3 | C2 | sing | 1.32Å | 1.31Å | Aromatic |
| C5 | C6 | doub | 1.41Å | 1.39Å | Aromatic |
| C2 | CM2 | sing | 1.51Å | 1.52Å | |
| C2 | N1 | doub | 1.32Å | 1.32Å | Aromatic |
| C6 | N1 | sing | 1.33Å | 1.31Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.44Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| CM8 | HM82 | sing | 1.09Å | 1.10Å | |
| CM8 | HM8 | sing | 1.09Å | 1.10Å | |
| CM8 | HM81 | sing | 1.09Å | 1.10Å | |
| CM2 | HM23 | sing | 1.09Å | 1.10Å | |
| CM2 | HM22 | sing | 1.09Å | 1.10Å | |
| CM2 | HM21 | sing | 1.09Å | 1.10Å | |
| N6 | H61 | sing | 0.97Å | 1.00Å | |
| N6 | H62 | sing | 0.97Å | 1.00Å | |
| P | OP3 | sing | 1.61Å | 1.58Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3' | C3' | C4' | 112.3° | 110.4° |
| O3' | C3' | C2' | 109.2° | 110.5° |
| O3' | C3' | H3' | 109.3° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 113.9° |
| O4' | C4' | C3' | 107.7° | 107.3° |
| O4' | C4' | C5' | 111.1° | 109.9° |
| C4' | O4' | C1' | 107.7° | 107.0° |
| O4' | C4' | H4' | 108.1° | 109.9° |
| C3' | C4' | C5' | 107.9° | 109.9° |
| C4' | C3' | C2' | 104.3° | 104.2° |
| C3' | C4' | H4' | 112.5° | 109.9° |
| C4' | C3' | H3' | 112.4° | 110.5° |
| C4' | C5' | O5' | 111.6° | 109.5° |
| C4' | C5' | H5'' | 108.9° | 109.4° |
| C4' | C5' | H5' | 108.9° | 109.5° |
| C5' | C4' | H4' | 109.5° | 110.0° |
| C5' | O5' | P | 122.2° | 123.0° |
| O5' | C5' | H5'' | 108.9° | 109.5° |
| O5' | C5' | H5' | 108.9° | 109.5° |
| O5' | P | OP2 | 115.4° | 109.5° |
| O5' | P | OP1 | 111.7° | 109.5° |
| O5' | P | OP3 | 104.6° | 109.5° |
| O4' | C1' | C2' | 106.3° | 103.5° |
| O4' | C1' | N9 | 105.4° | 110.6° |
| O4' | C1' | H1' | 113.4° | 110.8° |
| C3' | C2' | C1' | 102.7° | 102.1° |
| C3' | C2' | O2' | 112.5° | 110.9° |
| C2' | C3' | H3' | 109.1° | 110.6° |
| C3' | C2' | H2' | 109.9° | 110.8° |
| OP2 | P | OP1 | 109.0° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP2 | P | OP3 | 108.2° | 109.5° |
| CM8 | C8 | N9 | 124.8° | 125.0° |
| CM8 | C8 | N7 | 126.3° | 125.0° |
| C8 | CM8 | HM82 | 109.5° | 109.4° |
| C8 | CM8 | HM8 | 109.5° | 109.5° |
| C8 | CM8 | HM81 | 109.4° | 109.5° |
| C2' | C1' | N9 | 113.0° | 110.6° |
| C1' | C2' | O2' | 109.4° | 111.0° |
| C1' | C2' | H2' | 109.6° | 110.9° |
| C2' | C1' | H1' | 108.9° | 110.6° |
| C1' | N9 | C8 | 123.0° | 126.3° |
| C1' | N9 | C4 | 127.7° | 126.3° |
| N9 | C1' | H1' | 109.9° | 110.5° |
| OP1 | P | OP3 | 107.6° | 109.5° |
| O2' | C2' | H2' | 112.4° | 110.8° |
| C2' | O2' | HO2' | 109.5° | 114.1° |
| N9 | C8 | N7 | 108.9° | 110.0° |
| C8 | N9 | C4 | 109.3° | 107.4° |
| C8 | N7 | C5 | 108.8° | 109.5° |
| N9 | C4 | N3 | 135.1° | 134.9° |
| N9 | C4 | C5 | 105.6° | 106.0° |
| N7 | C5 | C4 | 107.4° | 107.2° |
| N7 | C5 | C6 | 134.9° | 134.7° |
| N3 | C4 | C5 | 119.3° | 119.1° |
| C4 | N3 | C2 | 120.5° | 120.7° |
| C4 | C5 | C6 | 117.4° | 118.2° |
| N3 | C2 | CM2 | 119.0° | 118.8° |
| N3 | C2 | N1 | 122.0° | 122.4° |
| C5 | C6 | N1 | 120.9° | 118.4° |
| C5 | C6 | N6 | 118.2° | 120.8° |
| CM2 | C2 | N1 | 119.0° | 118.8° |
| C2 | CM2 | HM23 | 109.5° | 109.4° |
| C2 | CM2 | HM22 | 109.5° | 109.5° |
| C2 | CM2 | HM21 | 109.5° | 109.5° |
| C2 | N1 | C6 | 119.7° | 121.2° |
| N1 | C6 | N6 | 120.9° | 120.8° |
| C6 | N6 | H61 | 109.5° | 120.0° |
| C6 | N6 | H62 | 109.4° | 120.1° |
| H5'' | C5' | H5' | 109.5° | 109.5° |
| HM82 | CM8 | HM8 | 109.5° | 109.5° |
| HM82 | CM8 | HM81 | 109.5° | 109.5° |
| HM8 | CM8 | HM81 | 109.5° | 109.4° |
| HM23 | CM2 | HM22 | 109.5° | 109.5° |
| HM23 | CM2 | HM21 | 109.5° | 109.4° |
| HM22 | CM2 | HM21 | 109.5° | 109.5° |
| H61 | N6 | H62 | 109.5° | 120.0° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3' | C3' | C4' | O4' | 95.8° | 120.7° |
| O3' | C3' | C4' | C2' | 118.2° | 118.6° |
| O3' | C3' | C4' | H3' | 123.7° | 122.6° |
| O3' | C3' | C4' | C5' | 144.2° | 119.9° |
| O3' | C3' | C2' | H3' | 119.4° | 122.6° |
| O3' | C3' | C2' | C1' | 87.6° | 97.8° |
| O3' | C3' | C2' | O2' | 29.8° | 20.5° |
| O3' | C3' | C4' | H4' | 23.2° | 1.3° |
| O3' | C3' | C2' | H2' | 155.9° | 144.0° |
| O4' | C4' | C3' | C5' | 120.0° | 119.4° |
| O4' | C4' | C3' | H4' | 119.0° | 119.4° |
| O4' | C4' | C5' | H4' | 119.3° | 121.1° |
| O4' | C4' | C5' | O5' | 171.5° | 66.5° |
| O4' | C4' | C3' | C2' | 22.4° | 2.1° |
| C4' | O4' | C1' | C2' | 18.5° | 40.1° |
| C4' | O4' | C1' | N9 | 138.7° | 158.6° |
| O4' | C4' | C5' | H5'' | 68.2° | 53.5° |
| O4' | C4' | C5' | H5' | 51.2° | 173.5° |
| O4' | C4' | C3' | H3' | 140.5° | 116.7° |
| C4' | O4' | C1' | H1' | 101.0° | 78.5° |
| C3' | C4' | C5' | H4' | 122.8° | 121.1° |
| C3' | C4' | C5' | O5' | 70.7° | 175.7° |
| C3' | C4' | O4' | C1' | 2.5° | 26.5° |
| C4' | C3' | C2' | H3' | 120.3° | 118.7° |
| C4' | C3' | C2' | C1' | 32.7° | 20.8° |
| C4' | C3' | C2' | O2' | 150.1° | 139.1° |
| C3' | C4' | C5' | H5'' | 49.6° | 64.3° |
| C3' | C4' | C5' | H5' | 169.0° | 55.8° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | H2' | 83.9° | 97.4° |
| C4' | C5' | O5' | H5'' | 120.3° | 120.0° |
| C4' | C5' | O5' | H5' | 120.3° | 120.0° |
| C4' | C5' | O5' | P | 107.9° | 180.0° |
| C5' | C4' | O4' | C1' | 115.5° | 145.9° |
| C5' | C4' | C3' | C2' | 97.6° | 121.5° |
| C4' | C5' | H5'' | H5' | 119.0° | 120.0° |
| C5' | C4' | C3' | H3' | 20.5° | 2.7° |
| C5' | O5' | P | OP2 | 165.7° | 65.0° |
| C5' | O5' | P | OP1 | 40.5° | 55.0° |
| O5' | C5' | H5'' | H5' | 119.0° | 120.0° |
| O5' | C5' | C4' | H4' | 52.2° | 54.7° |
| C5' | O5' | P | OP3 | 75.6° | 175.0° |
| O5' | P | OP2 | OP1 | 126.6° | 120.0° |
| O5' | P | OP2 | OP3 | 116.7° | 120.0° |
| O5' | P | OP1 | OP3 | 114.3° | 120.0° |
| O5' | P | OP2 | HOP2 | 126.6° | 60.0° |
| P | O5' | C5' | H5'' | 12.4° | 60.0° |
| P | O5' | C5' | H5' | 131.8° | 60.0° |
| O5' | P | OP3 | HOP3 | 118.9° | 180.0° |
| O4' | C1' | C2' | C3' | 31.8° | 37.0° |
| O4' | C1' | C2' | N9 | 115.1° | 118.5° |
| O4' | C1' | C2' | H1' | 122.5° | 118.7° |
| O4' | C1' | N9 | H1' | 122.6° | 123.1° |
| O4' | C1' | C2' | O2' | 151.4° | 155.3° |
| O4' | C1' | N9 | C8 | 106.1° | 38.8° |
| O4' | C1' | N9 | C4 | 71.7° | 141.0° |
| C1' | O4' | C4' | H4' | 124.4° | 92.9° |
| O4' | C1' | C2' | H2' | 85.0° | 81.1° |
| C3' | C2' | C1' | O2' | 119.6° | 118.3° |
| C3' | C2' | C1' | H2' | 116.8° | 118.1° |
| C3' | C2' | C1' | N9 | 146.8° | 155.5° |
| C3' | C2' | O2' | H2' | 124.7° | 123.6° |
| C2' | C3' | C4' | H4' | 141.4° | 117.3° |
| C2' | C3' | O3' | HO3' | 64.8° | 65.3° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.4° |
| C3' | C2' | C1' | H1' | 90.7° | 81.7° |
| OP2 | P | OP1 | OP3 | 117.1° | 120.0° |
| OP2 | P | OP3 | HOP3 | 117.6° | 60.0° |
| CM8 | C8 | N9 | C1' | 1.6° | 0.1° |
| CM8 | C8 | N9 | N7 | 178.6° | 179.9° |
| CM8 | C8 | N9 | C4 | 179.8° | 179.7° |
| CM8 | C8 | N7 | C5 | 177.9° | 179.7° |
| C8 | CM8 | HM82 | HM8 | 120.0° | 120.0° |
| C8 | CM8 | HM82 | HM81 | 120.0° | 120.0° |
| C8 | CM8 | HM8 | HM81 | 120.0° | 120.0° |
| C2' | C1' | N9 | H1' | 121.9° | 122.8° |
| C1' | C2' | O2' | H2' | 121.9° | 123.7° |
| C2' | C1' | N9 | C8 | 138.3° | 75.3° |
| C2' | C1' | N9 | C4 | 43.9° | 104.9° |
| C1' | C2' | C3' | H3' | 153.0° | 139.5° |
| C1' | C2' | O2' | HO2' | 66.7° | 174.2° |
| N9 | C1' | C2' | O2' | 93.5° | 86.2° |
| C1' | N9 | C8 | C4 | 178.1° | 179.8° |
| C1' | N9 | C8 | N7 | 179.8° | 179.8° |
| C1' | N9 | C4 | N3 | 1.3° | 0.0° |
| C1' | N9 | C4 | C5 | 178.8° | 180.0° |
| N9 | C1' | C2' | H2' | 30.1° | 37.4° |
| OP1 | P | OP2 | HOP2 | 0.0° | 179.9° |
| OP1 | P | OP3 | HOP3 | 0.0° | 60.0° |
| O2' | C2' | C3' | H3' | 89.6° | 102.2° |
| O2' | C2' | C1' | H1' | 28.9° | 36.6° |
| N9 | C8 | N7 | C5 | 0.6° | 0.4° |
| C8 | N9 | C4 | N3 | 179.4° | 179.8° |
| C8 | N9 | C4 | C5 | 3.2° | 0.2° |
| C8 | N9 | C1' | H1' | 16.5° | 161.9° |
| N9 | C8 | CM8 | HM82 | 178.3° | 90.0° |
| N9 | C8 | CM8 | HM8 | 58.3° | 149.9° |
| N9 | C8 | CM8 | HM81 | 61.7° | 30.0° |
| N7 | C8 | N9 | C4 | 1.7° | 0.4° |
| C8 | N7 | C5 | C4 | 2.6° | 0.3° |
| C8 | N7 | C5 | C6 | 175.6° | 179.7° |
| N7 | C8 | CM8 | HM82 | 0.0° | 89.8° |
| N7 | C8 | CM8 | HM8 | 120.0° | 30.2° |
| N7 | C8 | CM8 | HM81 | 120.0° | 150.2° |
| N9 | C4 | C5 | N7 | 3.5° | 0.0° |
| N9 | C4 | N3 | C5 | 177.2° | 180.0° |
| N9 | C4 | N3 | C2 | 179.8° | 180.0° |
| N9 | C4 | C5 | C6 | 177.9° | 180.0° |
| C4 | N9 | C1' | H1' | 165.7° | 17.9° |
| N7 | C5 | C4 | N3 | 178.6° | 180.0° |
| N7 | C5 | C4 | C6 | 174.4° | 180.0° |
| N7 | C5 | C6 | N1 | 176.7° | 180.0° |
| N7 | C5 | C6 | N6 | 5.1° | 0.0° |
| N3 | C4 | C5 | C6 | 4.1° | 0.0° |
| C4 | N3 | C2 | CM2 | 179.5° | 180.0° |
| C4 | N3 | C2 | N1 | 0.9° | 0.0° |
| C5 | C4 | N3 | C2 | 2.6° | 0.0° |
| C4 | C5 | C6 | N1 | 4.2° | 0.0° |
| C4 | C5 | C6 | N6 | 177.6° | 180.0° |
| N3 | C2 | CM2 | N1 | 178.7° | 180.0° |
| N3 | C2 | N1 | C6 | 0.8° | 0.0° |
| N3 | C2 | CM2 | HM23 | 0.0° | 90.0° |
| N3 | C2 | CM2 | HM22 | 120.0° | 150.0° |
| N3 | C2 | CM2 | HM21 | 120.0° | 29.9° |
| C5 | C6 | N1 | C2 | 2.5° | 0.0° |
| C5 | C6 | N1 | N6 | 178.2° | 180.0° |
| C5 | C6 | N6 | H61 | 178.2° | 0.1° |
| C5 | C6 | N6 | H62 | 58.2° | 180.0° |
| CM2 | C2 | N1 | C6 | 179.5° | 180.0° |
| C2 | CM2 | HM23 | HM22 | 120.0° | 120.0° |
| C2 | CM2 | HM23 | HM21 | 120.0° | 120.0° |
| C2 | CM2 | HM22 | HM21 | 120.0° | 120.1° |
| C2 | N1 | C6 | N6 | 179.3° | 180.0° |
| N1 | C2 | CM2 | HM23 | 178.7° | 90.0° |
| N1 | C2 | CM2 | HM22 | 58.7° | 30.0° |
| N1 | C2 | CM2 | HM21 | 61.3° | 150.0° |
| N1 | C6 | N6 | H61 | 0.0° | 179.9° |
| N1 | C6 | N6 | H62 | 120.0° | 0.0° |
| C6 | N6 | H61 | H62 | 120.0° | 179.9° |
| HOP2 | OP2 | P | OP3 | 116.8° | 60.0° |
| H5'' | C5' | C4' | H4' | 172.5° | 174.6° |
| H5' | C5' | C4' | H4' | 68.1° | 65.3° |
| H4' | C4' | C3' | H3' | 100.5° | 123.9° |
| H3' | C3' | O3' | HO3' | 54.5° | 57.4° |
| H3' | C3' | C2' | H2' | 36.4° | 21.4° |
| H2' | C2' | O2' | HO2' | 55.3° | 62.2° |
| H2' | C2' | C1' | H1' | 152.5° | 160.2° |
| HM82 | CM8 | HM8 | HM81 | 120.0° | 120.0° |
| HM23 | CM2 | HM22 | HM21 | 120.0° | 120.0° |
