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8AF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3C1sing1.38Å1.41ÅAromatic
C3C7doub1.38Å1.40ÅAromatic
C1C19doub1.38Å1.39ÅAromatic
C7C9sing1.38Å1.40ÅAromatic
C19C20sing1.39Å1.49ÅAromatic
C19C18sing1.51Å1.42Å
C9C20doub1.40Å1.38ÅAromatic
C20C16sing1.48Å1.50Å
C18C15sing1.51Å1.44Å
C15C16sing1.39Å1.39ÅAromatic
C15C14doub1.38Å1.36ÅAromatic
C16C17doub1.39Å1.43ÅAromatic
C14C13sing1.38Å1.37ÅAromatic
C17C12sing1.39Å1.43ÅAromatic
C13C12doub1.39Å1.38ÅAromatic
C12N4sing1.40Å1.37Å
N4C8sing1.38Å1.37Å
N7C8doub1.31Å1.35ÅAromatic
N7C5sing1.36Å1.37ÅAromatic
C8N9sing1.37Å1.34ÅAromatic
O6C6doub1.22Å1.25Å
C5C6sing1.47Å1.47Å
C5C4doub1.39Å1.48ÅAromatic
N9C1'sing1.47Å1.47Å
N9C4sing1.37Å1.34ÅAromatic
C6N1sing1.34Å1.34Å
C1'O4'sing1.44Å1.44Å
C1'C2'sing1.54Å1.48Å
C4N3sing1.37Å1.36Å
O4'C4'sing1.44Å1.43Å
C2'C3'sing1.54Å1.48Å
N1C2doub1.32Å1.33Å
N3C2sing1.36Å1.36Å
C4'C3'sing1.55Å1.46Å
C4'C5'sing1.53Å1.51Å
O3'C3'sing1.43Å1.40Å
C2N2sing1.37Å1.34Å
C5'O5'sing1.43Å1.41Å
O5'Psing1.61Å1.58Å
POP2sing1.61Å1.51Å
POP1sing1.61Å1.50Å
OP1H1sing0.97Å0.95Å
C5'H2sing1.09Å1.10Å
C5'H3sing1.09Å1.10Å
C4'H4sing1.09Å1.10Å
C3'H5sing1.09Å1.10Å
O3'H6sing0.97Å0.95Å
C2'H7sing1.09Å1.10Å
C2'H8sing1.09Å1.10Å
C1'H9sing1.09Å1.10Å
N3H10sing0.97Å1.00Å
N2H11sing0.97Å1.00Å
N2H12sing0.97Å1.00Å
OP2H13sing0.97Å0.95Å
N4H14sing0.97Å1.00Å
C13H15sing1.08Å1.08Å
C14H16sing1.08Å1.08Å
C17H17sing1.08Å1.08Å
C18H18sing1.09Å1.10Å
C18H19sing1.09Å1.10Å
C1H20sing1.08Å1.08Å
C3H21sing1.08Å1.08Å
C7H22sing1.08Å1.08Å
C9H23sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C3C7121.8°120.1°
C3C1C19117.2°120.1°
C3C1H20121.4°120.0°
C1C3H21119.1°120.0°
C3C7C9122.2°120.3°
C7C3H21119.1°119.9°
C3C7H22118.9°119.9°
C1C19C20121.0°120.2°
C1C19C18133.4°132.2°
C19C1H20121.4°120.0°
C7C9C20118.0°119.9°
C9C7H22118.9°119.9°
C7C9H23121.0°120.1°
C20C19C18105.6°107.6°
C19C20C9119.9°119.4°
C19C20C16109.0°109.4°
C19C18C15108.1°106.1°
C19C18H18109.8°110.1°
C19C18H19109.8°110.2°
C9C20C16131.0°131.2°
C20C9H23121.0°120.0°
C20C16C15103.9°109.4°
C20C16C17133.6°131.2°
C18C15C16113.3°107.5°
C18C15C14126.5°132.1°
C15C18H18109.8°110.1°
C15C18H19109.8°110.1°
C16C15C14120.2°120.4°
C15C16C17122.5°119.4°
C15C14C13118.9°120.2°
C15C14H16120.5°119.9°
C16C17C12115.5°119.9°
C16C17H17122.3°120.0°
C14C13C12123.6°120.0°
C14C13H15118.2°120.0°
C13C14H16120.6°119.9°
C17C12C13119.2°120.1°
C17C12N4132.4°120.0°
C12C17H17122.2°120.0°
C13C12N4108.0°119.9°
C12C13H15118.2°120.0°
C12N4C8138.6°120.0°
C12N4H14110.7°120.0°
N4C8N7135.7°125.3°
N4C8N9109.3°125.3°
C8N4H14110.8°120.0°
C8N7C5102.9°109.1°
N7C8N9115.0°109.3°
N7C5C6135.4°134.3°
N7C5C4109.6°107.5°
C8N9C1'122.5°126.2°
C8N9C4108.2°107.5°
O6C6C5120.4°120.7°
O6C6N1120.7°120.8°
C6C5C4115.0°118.1°
C5C6N1118.9°118.6°
C5C4N9104.1°106.5°
C5C4N3120.3°118.9°
C1'N9C4128.9°126.2°
N9C1'O4'107.0°110.4°
N9C1'C2'114.0°110.4°
N9C1'H9109.7°110.5°
N9C4N3135.6°134.6°
C6N1C2123.4°121.3°
O4'C1'C2'106.5°104.8°
C1'O4'C4'112.7°105.3°
O4'C1'H9110.0°110.4°
C1'C2'C3'104.5°104.1°
C1'C2'H7110.7°110.5°
C1'C2'H8110.7°110.6°
C2'C1'H9109.5°110.4°
C4N3C2119.8°120.5°
C4N3H10120.1°119.7°
O4'C4'C3'103.5°104.8°
O4'C4'C5'121.3°110.4°
O4'C4'H4111.4°110.5°
C2'C3'C4'111.7°104.0°
C2'C3'O3'108.8°110.7°
C2'C3'H5109.4°110.5°
C3'C2'H7110.7°110.5°
C3'C2'H8110.7°110.5°
N1C2N3122.7°122.5°
N1C2N2116.2°118.7°
N3C2N2121.2°118.8°
C2N3H10120.1°119.7°
C3'C4'C5'98.3°110.4°
C4'C3'O3'106.9°110.5°
C3'C4'H4111.0°110.4°
C4'C3'H5109.6°110.5°
C4'C5'O5'104.9°109.4°
C4'C5'H2110.6°109.5°
C4'C5'H3110.6°109.4°
C5'C4'H4110.1°110.3°
O3'C3'H5110.5°110.5°
C3'O3'H6109.5°113.9°
C2N2H11120.0°120.0°
C2N2H12120.0°120.0°
C5'O5'P115.6°123.0°
O5'C5'H2110.6°109.5°
O5'C5'H3110.6°109.5°
O5'POP2108.3°102.0°
O5'POP1109.3°102.0°
OP2POP1117.2°102.0°
POP2H13109.5°114.0°
POP1H1109.5°114.0°
H2C5'H3109.5°109.5°
H7C2'H8109.5°110.4°
H11N2H12120.0°120.0°
H18C18H19109.4°110.2°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C3C7H21180.0°179.9°
C3C1C19H20180.0°180.0°
C1C3C7C90.6°0.5°
C3C1C19C200.9°0.0°
C3C1C19C18179.1°179.3°
C1C3C7H22179.4°179.9°
C7C3C1C190.4°0.0°
C3C7C9H22180.0°179.5°
C3C7C9C201.1°1.0°
C7C3C1H20179.6°180.0°
C3C7C9H23178.9°180.0°
C1C19C20C18180.0°179.5°
C1C19C20C90.4°0.4°
C1C19C20C16178.9°179.9°
C1C19C18C15178.8°179.7°
C1C19C18H1859.0°61.2°
C1C19C18H1961.3°60.5°
C19C1C3H21179.6°179.9°
C7C9C20C190.6°0.9°
C7C9C20H23180.0°179.0°
C7C9C20C16179.7°179.6°
C9C7C3H21179.4°179.5°
C19C20C9C16179.1°179.5°
C20C19C18C151.2°0.3°
C19C20C16C150.5°0.5°
C19C20C16C17179.8°179.8°
C20C19C18H18121.0°119.4°
C20C19C18H19118.6°118.9°
C20C19C1H20179.1°180.0°
C19C20C9H23179.4°180.0°
C18C19C20C9179.6°179.9°
C18C19C20C161.1°0.5°
C19C18C15H18119.8°119.1°
C19C18C15H19119.8°119.2°
C19C18C15C161.0°0.0°
C19C18C15C14179.0°179.7°
C19C18H18H19120.6°121.7°
C18C19C1H200.9°0.7°
C9C20C16C15179.7°180.0°
C9C20C16C170.6°0.3°
C20C9C7H22178.9°179.6°
C20C16C15C180.3°0.3°
C20C16C15C17179.8°179.8°
C20C16C15C14179.7°180.0°
C20C16C17C12179.4°179.8°
C20C16C17H170.6°0.2°
C16C20C9H230.2°0.5°
C18C15C16C14180.0°179.7°
C18C15C16C17179.5°180.0°
C18C15C14C13179.8°179.7°
C18C15C14H160.2°0.3°
C15C18H18H19120.6°121.7°
C16C15C14C130.2°0.0°
C15C16C17C120.3°0.5°
C16C15C14H16179.8°180.0°
C15C16C17H17179.7°179.9°
C16C15C18H18120.8°119.1°
C16C15C18H19118.8°119.2°
C14C15C16C170.5°0.3°
C15C14C13H16180.0°180.0°
C15C14C13C121.0°0.0°
C15C14C13H15179.0°180.0°
C14C15C18H1859.2°60.6°
C14C15C18H1961.2°61.1°
C16C17C12H17180.0°179.6°
C16C17C12C131.4°0.5°
C16C17C12N4170.7°179.8°
C14C13C12C171.8°0.3°
C14C13C12H15180.0°179.9°
C14C13C12N4172.1°180.0°
C17C12C13N4173.9°179.7°
C17C12N4C843.0°25.8°
C17C12N4H14137.0°154.2°
C17C12C13H15178.2°179.8°
C13C12N4C8129.7°154.5°
C13C12N4H1450.3°25.5°
C12C13C14H16179.0°180.0°
C13C12C17H17178.6°179.9°
C12N4C8H14180.0°179.9°
C12N4C8N71.3°5.6°
C12N4C8N9179.8°173.8°
N4C12C13H157.9°0.1°
N4C12C17H179.3°0.2°
N4C8N7N9178.8°179.6°
N4C8N7C5177.8°180.0°
N4C8N9C1'3.9°0.3°
N4C8N9C4176.6°180.0°
C8N7C5C6177.3°179.7°
C8N7C5C41.3°0.3°
N7C8N9C1'177.0°179.8°
N7C8N9C44.2°0.4°
N7C8N4H14178.7°174.3°
C5N7C8N93.4°0.4°
N7C5C6O60.2°0.0°
N7C5C6C4178.5°180.0°
N7C5C4N91.0°0.0°
N7C5C6N1179.7°180.0°
N7C5C4N3179.5°180.0°
C8N9C4C53.0°0.2°
C8N9C1'C4171.2°179.7°
C8N9C1'O4'118.8°43.2°
C8N9C1'C2'123.7°72.1°
C8N9C4N3177.7°179.8°
C8N9C1'H90.5°165.5°
N9C8N4H140.2°6.2°
O6C6C5N1180.0°180.0°
O6C6C5C4178.7°180.0°
O6C6N1C2178.3°180.0°
C6C5C4N9179.9°180.0°
C6C5C4N30.6°0.0°
C5C6N1C21.6°0.0°
C5C4N9C1'175.1°180.0°
C5C4N9N3179.4°180.0°
C4C5C6N11.2°0.0°
C5C4N3C20.3°0.1°
C5C4N3H10179.8°180.0°
N9C1'O4'C2'122.3°118.8°
N9C1'O4'H9119.1°122.4°
N9C1'C2'H9123.3°122.4°
C1'N9C4N35.5°0.0°
N9C1'O4'C4'131.5°159.3°
N9C1'C2'C3'127.6°142.8°
N9C1'C2'H7113.2°24.1°
N9C1'C2'H88.4°98.5°
C4N9C1'O4'52.4°136.5°
C4N9C1'C2'65.2°108.2°
N9C4N3C2179.6°180.0°
C4N9C1'H9171.6°14.2°
N9C4N3H100.4°0.0°
C6N1C2N31.3°0.1°
C6N1C2N2179.2°180.0°
O4'C1'C2'H9118.9°118.8°
O4'C1'C2'C3'9.8°24.0°
C1'O4'C4'C3'4.3°40.5°
C1'O4'C4'C5'112.9°159.4°
C1'O4'C4'H4115.0°78.4°
O4'C1'C2'H7129.0°94.7°
O4'C1'C2'H8109.4°142.7°
C2'C1'O4'C4'9.2°40.5°
C1'C2'C3'H7119.2°118.7°
C1'C2'C3'H8119.2°118.8°
C1'C2'C3'C4'7.7°0.0°
C1'C2'C3'O3'110.1°118.7°
C1'C2'C3'H5129.2°118.6°
C1'C2'H7H8122.3°122.7°
C4N3C2N10.6°0.1°
C4N3C2H10180.0°179.9°
C4N3C2N2179.9°179.9°
O4'C4'C3'C2'2.3°23.9°
O4'C4'C3'C5'125.1°118.9°
O4'C4'C3'H4119.6°119.0°
O4'C4'C5'H4132.6°122.4°
O4'C4'C3'O3'116.6°142.8°
O4'C4'C5'O5'96.2°69.6°
O4'C4'C5'H2144.5°50.4°
O4'C4'C5'H323.0°170.4°
O4'C4'C3'H5123.7°94.7°
C4'O4'C1'H9109.5°78.3°
C2'C3'C4'O3'118.9°118.8°
C2'C3'C4'H5121.4°118.7°
C2'C3'C4'C5'122.8°142.8°
C2'C3'O3'H5120.0°122.8°
C2'C3'C4'H4121.9°95.0°
C2'C3'O3'H6180.0°65.3°
C3'C2'H7H8122.3°122.6°
C3'C2'C1'H9109.1°94.8°
N1C2N3N2179.5°180.0°
N1C2N3H10179.5°180.0°
N1C2N2H110.0°180.0°
N1C2N2H12180.0°0.0°
N3C2N2H11179.5°0.0°
N3C2N2H120.5°180.0°
C3'C4'C5'H4116.0°122.2°
C4'C3'O3'H5119.2°122.5°
C3'C4'C5'O5'152.4°175.0°
C3'C4'C5'H233.1°65.0°
C3'C4'C5'H388.4°55.0°
C4'C3'O3'H659.2°180.0°
C4'C3'C2'H7126.9°118.6°
C4'C3'C2'H8111.5°118.8°
C5'C4'C3'O3'118.4°98.4°
C4'C5'O5'H2119.3°120.0°
C4'C5'O5'H3119.3°120.0°
C4'C5'O5'P125.3°179.9°
C4'C5'H2H3122.2°120.0°
C5'C4'C3'H51.4°24.2°
O3'C3'C4'H43.0°23.8°
O3'C3'C2'H79.1°122.7°
O3'C3'C2'H8130.7°0.1°
N2C2N3H100.0°0.0°
C2N2H11H12180.0°179.9°
C5'O5'POP223.6°165.0°
C5'O5'POP1152.4°89.8°
O5'C5'H2H3122.1°120.0°
O5'C5'C4'H436.4°52.7°
O5'POP2OP1124.2°105.2°
O5'POP1H1180.0°74.8°
PO5'C5'H2115.5°60.0°
PO5'C5'H36.0°60.1°
O5'POP2H13180.0°180.0°
OP2POP1H156.3°180.0°
OP1POP2H1355.8°74.8°
H2C5'C4'H482.9°172.7°
H3C5'C4'H4155.6°67.2°
H4C4'C3'H5116.8°146.3°
H5C3'O3'H660.0°57.4°
H5C3'C2'H7111.6°0.0°
H5C3'C2'H810.0°122.6°
H7C2'C1'H910.1°146.5°
H8C2'C1'H9131.6°23.9°
H15C13C14H161.0°0.0°
H20C1C3H210.4°0.1°
H21C3C7H220.6°0.0°
H22C7C9H231.1°0.6°

225946

PDB entries from 2024-10-09

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