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8AA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OP2Psing1.61Å1.53Å
OP1Psing1.61Å1.50Å
PO5'sing1.61Å1.62Å
C2N1doub1.32Å1.33Å
N1C6sing1.34Å1.32Å
N2C2sing1.37Å1.33Å
C2N3sing1.36Å1.34Å
N2HN2sing0.97Å1.00Å
N2HN2Asing0.97Å1.00Å
C20C3doub1.41Å1.38ÅAromatic
C3C7sing1.36Å1.39ÅAromatic
C3H3sing1.08Å1.08Å
N3C4sing1.37Å1.33Å
N3HN3sing0.97Å1.00Å
C4N9sing1.36Å1.32ÅAromatic
C4C5doub1.39Å1.48ÅAromatic
C8N4sing1.39Å1.39Å
C9N4sing1.35Å1.37Å
N4C12sing1.40Å1.40Å
C6C5sing1.46Å1.50Å
C5N7sing1.36Å1.37ÅAromatic
C6O6doub1.22Å1.25Å
C7C11doub1.39Å1.40ÅAromatic
C7H7sing1.08Å1.08Å
C8N7doub1.31Å1.36ÅAromatic
N9C8sing1.37Å1.34ÅAromatic
O11C9doub1.21Å1.23Å
C9C10sing1.51Å1.51Å
C1'N9sing1.47Å1.48Å
C2'C1'sing1.54Å1.52Å
O4'C1'sing1.44Å1.44Å
C1'H1'sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C10H10Bsing1.09Å1.10Å
C22C11sing1.36Å1.39ÅAromatic
C11H11sing1.08Å1.08Å
C12C13sing1.40Å1.40ÅAromatic
C12C17doub1.36Å1.40ÅAromatic
C13C14doub1.36Å1.38ÅAromatic
C13H13sing1.08Å1.08Å
C14C15sing1.41Å1.38ÅAromatic
C14H14sing1.08Å1.08Å
C16C15sing1.47Å1.41ÅAromatic
C15C18doub1.39Å1.38ÅAromatic
C17C16sing1.41Å1.38ÅAromatic
C16C21doub1.39Å1.38ÅAromatic
C17H17sing1.08Å1.08Å
C18C19sing1.39Å1.37ÅAromatic
C18H18sing1.08Å1.08Å
C20C19sing1.47Å1.49ÅAromatic
C19C22doub1.41Å1.38ÅAromatic
C3'C2'sing1.55Å1.52Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C21C20sing1.39Å1.37ÅAromatic
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
O3'C3'sing1.43Å1.43Å
C3'C4'sing1.55Å1.53Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C5'C4'sing1.53Å1.52Å
C4'O4'sing1.45Å1.43Å
C4'H4'sing1.09Å1.10Å
C5'O5'sing1.43Å1.41Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
OP1HOP1sing0.97Å0.95Å
OP2HOP2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OP2POP1115.7°102.1°
OP2PO5'107.3°102.0°
POP2HOP2109.5°114.0°
OP1PO5'112.5°102.0°
POP1HOP1109.5°114.0°
PO5'C5'120.4°123.0°
C2N1C6121.6°121.3°
N1C2N2117.0°118.7°
N1C2N3125.8°122.5°
N1C6C5117.5°118.7°
N1C6O6118.5°120.7°
N2C2N3117.2°118.8°
C2N2HN2120.0°120.0°
C2N2HN2A120.0°120.0°
C2N3C4119.3°120.6°
C2N3HN3120.3°119.8°
HN2N2HN2A120.0°120.0°
C20C3C7118.0°119.6°
C20C3H3121.0°120.2°
C3C20C19120.2°118.7°
C3C20C21119.8°121.1°
C7C3H3121.0°120.2°
C3C7C11121.8°121.7°
C3C7H7119.1°119.1°
C4N3HN3120.3°119.7°
N3C4N9133.1°134.6°
N3C4C5119.4°118.9°
N9C4C5107.6°106.5°
C4N9C8106.4°107.5°
C4N9C1'126.4°126.3°
C4C5C6116.4°118.1°
C4C5N7106.8°107.5°
C8N4C9125.0°120.0°
C8N4C12124.0°120.0°
N4C8N7123.8°125.3°
N4C8N9121.2°125.4°
C9N4C12110.9°120.0°
N4C9O11124.3°120.0°
N4C9C10115.9°120.0°
N4C12C13117.4°119.2°
N4C12C17121.3°119.2°
C6C5N7136.8°134.4°
C5C6O6124.0°120.7°
C5N7C8104.3°109.1°
C11C7H7119.1°119.1°
C7C11C22122.2°121.7°
C7C11H11118.9°119.1°
N7C8N9115.0°109.4°
C8N9C1'127.2°126.2°
O11C9C10119.7°120.0°
C9C10H10109.5°109.5°
C9C10H10A109.5°109.5°
C9C10H10B109.5°109.5°
N9C1'C2'108.8°109.9°
N9C1'O4'110.0°109.8°
N9C1'H1'109.4°109.9°
C2'C1'O4'109.7°107.4°
C2'C1'H1'108.9°109.9°
C1'C2'C3'104.7°104.2°
C1'C2'H2'110.7°110.5°
C1'C2'H2'A110.6°110.5°
O4'C1'H1'110.0°109.8°
C1'O4'C4'110.2°106.8°
H10C10H10A109.5°109.4°
H10C10H10B109.5°109.4°
H10AC10H10B109.4°109.5°
C22C11H11118.9°119.2°
C11C22C19117.6°119.6°
C11C22H22121.2°120.2°
C13C12C17121.1°121.6°
C12C13C14120.0°121.7°
C12C13H13120.0°119.2°
C12C17C16118.8°119.5°
C12C17H17120.6°120.2°
C14C13H13120.0°119.2°
C13C14C15119.0°119.7°
C13C14H14120.5°120.1°
C15C14H14120.5°120.2°
C14C15C16121.2°118.8°
C14C15C18116.8°121.0°
C16C15C18122.0°120.2°
C15C16C17119.8°118.8°
C15C16C21122.2°120.2°
C15C18C19117.6°119.6°
C15C18H18121.2°120.2°
C17C16C21117.9°121.0°
C16C17H17120.6°120.2°
C16C21C20117.8°119.6°
C16C21H21121.1°120.2°
C19C18H18121.2°120.2°
C18C19C20120.4°120.2°
C18C19C22119.4°121.1°
C20C19C22120.2°118.6°
C19C20C21120.0°120.2°
C19C22H22121.2°120.2°
C3'C2'H2'110.6°110.5°
C3'C2'H2'A110.6°110.6°
C2'C3'O3'113.2°110.8°
C2'C3'C4'106.9°102.1°
C2'C3'H3'109.3°110.9°
H2'C2'H2'A109.5°110.5°
C20C21H21121.1°120.2°
O3'C3'C4'107.5°110.9°
O3'C3'H3'110.6°110.8°
C3'O3'HO3'109.5°114.1°
C4'C3'H3'109.2°111.0°
C3'C4'C5'110.5°110.6°
C3'C4'O4'108.4°103.6°
C3'C4'H4'108.2°110.7°
C5'C4'O4'112.0°110.6°
C5'C4'H4'108.2°110.7°
C4'C5'O5'109.2°109.5°
C4'C5'H5'109.5°109.5°
C4'C5'H5'A109.5°109.5°
O4'C4'H4'109.5°110.5°
O5'C5'H5'109.5°109.4°
O5'C5'H5'A109.6°109.5°
H5'C5'H5'A109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OP2POP1O5'123.9°105.3°
OP2PO5'C5'101.4°89.8°
OP2POP1HOP1180.0°74.7°
OP1PO5'C5'27.0°164.9°
OP1POP2HOP2180.0°74.7°
PO5'C5'C4'150.2°180.0°
PO5'C5'H5'30.3°60.0°
PO5'C5'H5'A89.8°59.9°
O5'POP1HOP156.1°180.0°
O5'POP2HOP253.5°180.0°
N1C2N2N3179.3°180.0°
N1C2N2HN20.0°0.0°
N1C2N2HN2A180.0°180.0°
N1C2N3C40.3°0.0°
N1C2N3HN3179.6°179.9°
C2N1C6C50.4°0.1°
C2N1C6O6179.8°180.0°
C6N1C2N2179.0°180.0°
C6N1C2N30.3°0.0°
N1C6C5C40.6°0.1°
N1C6C5O6179.3°179.9°
N1C6C5N7179.0°180.0°
C2N2HN2HN2A180.0°180.0°
N2C2N3C4178.9°180.0°
N2C2N3HN31.1°0.0°
N3C2N2HN2179.3°180.0°
N3C2N2HN2A0.7°0.0°
C2N3C4HN3180.0°180.0°
C2N3C4N9179.6°180.0°
C2N3C4C50.5°0.0°
C20C3C7H3180.0°179.7°
C20C3C7C110.2°0.2°
C20C3C7H7179.8°179.7°
C3C20C21C16179.9°180.0°
C3C20C19C18179.9°179.8°
C3C20C19C21179.9°180.0°
C3C20C19C220.1°0.5°
C3C20C21H210.1°0.0°
C3C7C11H7180.0°180.0°
C3C7C11C220.3°0.1°
C3C7C11H11179.7°180.0°
C7C3C20C190.0°0.0°
C7C3C20C21179.9°180.0°
H3C3C7C11179.8°179.9°
H3C3C7H70.2°0.1°
H3C3C20C19180.0°179.7°
H3C3C20C210.1°0.3°
N3C4N9C5179.2°180.0°
N3C4C5C60.7°0.1°
N3C4C5N7179.1°180.0°
N3C4N9C8178.9°180.0°
N3C4N9C1'0.2°0.0°
HN3N3C4N90.3°0.0°
HN3N3C4C5179.4°179.9°
C4N9C8N4179.7°180.0°
N9C4C5C6180.0°180.0°
N9C4C5N70.2°0.0°
C4N9C8N70.2°0.1°
C4N9C8C1'179.2°180.0°
C4N9C1'C2'14.3°74.6°
C4N9C1'O4'105.8°43.4°
C4N9C1'H1'133.2°164.3°
C4C5C6N7179.7°179.9°
C4C5C6O6179.9°180.0°
C4C5N7C80.1°0.0°
C5C4N9C80.2°0.1°
C5C4N9C1'179.4°180.0°
C8N4C9C12179.9°180.0°
N4C8N7C5179.9°180.0°
N4C8N7N9179.9°179.9°
C8N4C9O1163.1°175.7°
C8N4C9C10120.4°4.3°
N4C8N9C1'0.6°0.1°
C8N4C12C13101.2°7.8°
C8N4C12C1784.2°172.2°
C9N4C8N7103.2°85.3°
C9N4C8N976.7°94.8°
N4C9O11C10176.4°180.0°
N4C9C10H10176.7°5.1°
N4C9C10H10A63.3°114.9°
N4C9C10H10B56.7°125.0°
C9N4C12C1378.9°172.2°
C9N4C12C1795.7°7.7°
C12N4C8N776.6°94.7°
C12N4C8N9103.5°85.1°
C12N4C9O11117.1°4.2°
C12N4C9C1059.5°175.7°
N4C12C13C17174.6°180.0°
N4C12C13C14176.8°180.0°
N4C12C13H133.2°0.0°
N4C12C17C16176.7°180.0°
N4C12C17H173.3°0.0°
C6C5N7C8179.8°179.9°
N7C5C6O60.3°0.1°
C5N7C8N90.0°0.1°
C7C11C22H11180.0°179.9°
C7C11C22C190.1°0.6°
C7C11C22H22179.9°179.8°
H7C7C11C22179.7°180.0°
H7C7C11H110.3°0.1°
N7C8N9C1'179.4°180.0°
C8N9C1'C2'166.7°105.4°
C8N9C1'O4'73.2°136.6°
C8N9C1'H1'47.8°15.7°
O11C9C10H100.0°175.0°
O11C9C10H10A120.0°65.1°
O11C9C10H10B120.0°55.0°
C9C10H10H10A120.0°120.0°
C9C10H10H10B120.0°120.0°
C9C10H10AH10B120.0°120.1°
N9C1'C2'O4'120.4°119.5°
N9C1'C2'H1'119.2°121.0°
N9C1'O4'H1'120.6°121.0°
N9C1'C2'C3'118.6°121.4°
N9C1'C2'H2'122.2°119.9°
N9C1'C2'H2'A0.7°2.7°
N9C1'O4'C4'117.6°145.8°
C2'C1'O4'H1'119.8°119.5°
C1'C2'C3'H2'119.3°118.7°
C1'C2'C3'H2'A119.2°118.7°
C1'C2'H2'H2'A122.2°122.6°
C1'C2'C3'O3'119.1°139.1°
C1'C2'C3'C4'0.9°20.9°
C1'C2'C3'H3'117.2°97.3°
C2'C1'O4'C4'2.0°26.3°
O4'C1'C2'C3'1.8°1.9°
O4'C1'C2'H2'117.5°120.6°
O4'C1'C2'H2'A121.0°116.8°
C1'O4'C4'C3'1.3°39.9°
C1'O4'C4'C5'120.8°158.4°
C1'O4'C4'H4'119.1°78.6°
H1'C1'C2'C3'122.2°117.6°
H1'C1'C2'H2'3.0°1.1°
H1'C1'C2'H2'A118.5°123.7°
H1'C1'O4'C4'121.7°93.2°
H10C10H10AH10B120.0°120.0°
C11C22C19C18179.8°179.9°
C11C22C19C200.0°0.8°
C11C22C19H22180.0°179.2°
H11C11C22C19179.8°179.5°
H11C11C22H220.2°0.3°
C12C13C14H13180.0°180.0°
C12C13C14C151.0°0.1°
C12C13C14H14179.0°180.0°
C13C12C17C162.4°0.0°
C13C12C17H17177.6°180.0°
C17C12C13C142.3°0.0°
C17C12C13H13177.7°180.0°
C12C17C16C151.3°0.0°
C12C17C16H17180.0°180.0°
C12C17C16C21179.0°179.9°
C13C14C15H14180.0°180.0°
C13C14C15C160.0°0.1°
C13C14C15C18179.9°179.8°
H13C13C14C15179.0°180.0°
H13C13C14H141.0°0.0°
C14C15C16C18179.9°179.7°
C14C15C16C170.1°0.0°
C14C15C16C21179.8°180.0°
C14C15C18C19180.0°179.8°
C14C15C18H180.0°0.0°
H14C14C15C16179.9°180.0°
H14C14C15C180.1°0.2°
C15C16C17C21179.7°179.9°
C15C16C17H17178.7°180.0°
C16C15C18C190.0°0.5°
C16C15C18H18180.0°179.7°
C15C16C21C200.3°0.1°
C15C16C21H21179.7°180.0°
C18C15C16C17180.0°179.8°
C18C15C16C210.3°0.3°
C15C18C19H18180.0°179.8°
C15C18C19C200.1°0.5°
C15C18C19C22179.9°179.7°
C17C16C21C20179.9°180.0°
C17C16C21H210.0°0.1°
C21C16C17H171.0°0.1°
C16C21C20C190.2°0.0°
C16C21C20H21180.0°179.9°
C18C19C20C22179.7°179.3°
C18C19C20C210.0°0.3°
C18C19C22H220.2°0.7°
H18C18C19C20179.9°179.7°
H18C18C19C220.2°0.5°
C19C20C21H21179.8°180.0°
C20C19C22H22180.0°180.0°
C22C19C20C21179.8°179.5°
C3'C2'H2'H2'A122.2°122.7°
C2'C3'O3'C4'117.9°112.7°
C2'C3'O3'H3'123.0°123.6°
C2'C3'C4'H3'118.2°118.2°
C2'C3'O3'HO3'180.0°61.5°
C2'C3'C4'C5'122.9°155.5°
C2'C3'C4'O4'0.2°37.0°
C2'C3'C4'H4'118.8°81.4°
H2'C2'C3'O3'0.1°20.4°
H2'C2'C3'C4'118.3°97.8°
H2'C2'C3'H3'123.6°144.0°
H2'AC2'C3'O3'121.6°102.2°
H2'AC2'C3'C4'120.2°139.6°
H2'AC2'C3'H3'2.1°21.4°
O3'C3'C4'H3'120.0°123.6°
O3'C3'C4'C5'115.3°86.4°
O3'C3'C4'O4'121.7°155.1°
O3'C3'C4'H4'3.0°36.7°
C4'C3'O3'HO3'62.1°174.1°
C3'C4'C5'O4'120.9°114.2°
C3'C4'C5'H4'118.3°123.0°
C3'C4'O4'H4'117.8°118.5°
C3'C4'C5'O5'100.2°175.0°
C3'C4'C5'H5'139.9°55.1°
C3'C4'C5'H5'A19.8°65.0°
H3'C3'O3'HO3'57.0°62.2°
H3'C3'C4'C5'4.7°37.3°
H3'C3'C4'O4'118.3°81.2°
H3'C3'C4'H4'123.0°160.4°
C5'C4'O4'H4'120.0°122.9°
C4'C5'O5'H5'119.9°119.9°
C4'C5'O5'H5'A120.0°120.1°
C4'C5'H5'H5'A120.1°120.1°
O4'C4'C5'O5'20.8°70.8°
O4'C4'C5'H5'99.2°169.2°
O4'C4'C5'H5'A140.7°49.2°
H4'C4'C5'O5'141.5°52.0°
H4'C4'C5'H5'21.6°67.9°
H4'C4'C5'H5'A98.5°172.0°
O5'C5'H5'H5'A120.2°120.0°

224004

PDB entries from 2024-08-21

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