82U
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CZ3 | C8 | sing | 1.53Å | 1.51Å | |
C8 | CZ2 | sing | 1.53Å | 1.52Å | |
CZ2 | C6 | sing | 1.53Å | 1.52Å | |
C6 | N | sing | 1.47Å | 1.45Å | |
O4 | C17 | doub | 1.21Å | 1.29Å | |
N | CA | sing | 1.40Å | 1.44Å | |
CB | CA | doub | 1.38Å | 1.39Å | Aromatic |
CB | CG | sing | 1.40Å | 1.39Å | Aromatic |
C17 | CG | sing | 1.47Å | 1.50Å | |
C17 | O5 | sing | 1.35Å | 1.24Å | |
CA | C | sing | 1.40Å | 1.38Å | Aromatic |
CG | CD2 | doub | 1.40Å | 1.39Å | Aromatic |
C | O | sing | 1.36Å | 1.37Å | |
C | C1 | doub | 1.39Å | 1.38Å | Aromatic |
CD2 | C1 | sing | 1.38Å | 1.39Å | Aromatic |
O | C11 | sing | 1.36Å | 1.37Å | |
C1 | S1 | sing | 1.76Å | 1.74Å | |
C11 | C16 | doub | 1.39Å | 1.39Å | Aromatic |
C11 | C12 | sing | 1.39Å | 1.39Å | Aromatic |
C16 | C15 | sing | 1.38Å | 1.39Å | Aromatic |
C12 | C13 | doub | 1.38Å | 1.39Å | Aromatic |
C15 | C14 | doub | 1.38Å | 1.39Å | Aromatic |
C13 | C14 | sing | 1.38Å | 1.39Å | Aromatic |
S1 | O1 | doub | 1.42Å | 1.43Å | |
S1 | O2 | doub | 1.42Å | 1.43Å | |
S1 | NE1 | sing | 1.66Å | 1.70Å | |
C6 | H1 | sing | 1.09Å | 1.10Å | |
C6 | H2 | sing | 1.09Å | 1.10Å | |
C8 | H3 | sing | 1.09Å | 1.10Å | |
C8 | H4 | sing | 1.09Å | 1.10Å | |
C13 | H5 | sing | 1.08Å | 1.08Å | |
C15 | H6 | sing | 1.08Å | 1.08Å | |
N | H7 | sing | 0.97Å | 1.00Å | |
CB | H8 | sing | 1.08Å | 1.08Å | |
CD2 | H9 | sing | 1.08Å | 1.08Å | |
NE1 | H10 | sing | 0.97Å | 1.00Å | |
NE1 | H11 | sing | 0.97Å | 1.00Å | |
CZ2 | H12 | sing | 1.09Å | 1.10Å | |
CZ2 | H13 | sing | 1.09Å | 1.10Å | |
CZ3 | H14 | sing | 1.09Å | 1.10Å | |
CZ3 | H15 | sing | 1.09Å | 1.10Å | |
CZ3 | H16 | sing | 1.09Å | 1.10Å | |
C12 | H17 | sing | 1.08Å | 1.08Å | |
C14 | H18 | sing | 1.08Å | 1.08Å | |
C16 | H19 | sing | 1.08Å | 1.08Å | |
O5 | H20 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CZ3 | C8 | CZ2 | 110.9° | 109.5° |
CZ3 | C8 | H3 | 109.1° | 109.5° |
CZ3 | C8 | H4 | 109.1° | 109.5° |
C8 | CZ3 | H14 | 109.5° | 109.4° |
C8 | CZ3 | H15 | 109.5° | 109.5° |
C8 | CZ3 | H16 | 109.5° | 109.5° |
C8 | CZ2 | C6 | 110.8° | 109.5° |
CZ2 | C8 | H3 | 109.1° | 109.5° |
CZ2 | C8 | H4 | 109.1° | 109.4° |
C8 | CZ2 | H12 | 109.1° | 109.5° |
C8 | CZ2 | H13 | 109.2° | 109.5° |
CZ2 | C6 | N | 112.6° | 109.5° |
CZ2 | C6 | H1 | 108.7° | 109.5° |
CZ2 | C6 | H2 | 108.7° | 109.5° |
C6 | CZ2 | H12 | 109.1° | 109.5° |
C6 | CZ2 | H13 | 109.1° | 109.5° |
C6 | N | CA | 121.0° | 120.0° |
N | C6 | H1 | 108.7° | 109.5° |
N | C6 | H2 | 108.7° | 109.5° |
C6 | N | H7 | 106.5° | 120.0° |
O4 | C17 | CG | 119.2° | 120.0° |
O4 | C17 | O5 | 121.7° | 120.0° |
N | CA | CB | 120.8° | 120.0° |
N | CA | C | 119.2° | 120.0° |
CA | N | H7 | 106.5° | 120.0° |
CA | CB | CG | 120.0° | 119.8° |
CB | CA | C | 120.0° | 120.0° |
CA | CB | H8 | 120.0° | 120.1° |
CB | CG | C17 | 120.3° | 120.1° |
CB | CG | CD2 | 119.9° | 119.9° |
CG | CB | H8 | 120.0° | 120.1° |
CG | C17 | O5 | 119.1° | 120.0° |
C17 | CG | CD2 | 119.8° | 120.1° |
C17 | O5 | H20 | 109.5° | 117.0° |
CA | C | O | 120.0° | 119.9° |
CA | C | C1 | 120.2° | 120.1° |
CG | CD2 | C1 | 119.9° | 120.0° |
CG | CD2 | H9 | 120.1° | 120.0° |
O | C | C1 | 119.9° | 120.0° |
C | O | C11 | 119.6° | 118.0° |
C | C1 | CD2 | 120.1° | 120.2° |
C | C1 | S1 | 119.6° | 119.9° |
CD2 | C1 | S1 | 120.3° | 119.9° |
C1 | CD2 | H9 | 120.1° | 120.0° |
O | C11 | C16 | 120.2° | 120.1° |
O | C11 | C12 | 119.9° | 120.0° |
C1 | S1 | O1 | 109.2° | 106.4° |
C1 | S1 | O2 | 109.4° | 106.4° |
C1 | S1 | NE1 | 109.5° | 107.2° |
C16 | C11 | C12 | 119.9° | 119.9° |
C11 | C16 | C15 | 120.1° | 119.9° |
C11 | C16 | H19 | 120.0° | 120.0° |
C11 | C12 | C13 | 120.0° | 120.0° |
C11 | C12 | H17 | 120.0° | 120.0° |
C16 | C15 | C14 | 120.0° | 120.1° |
C16 | C15 | H6 | 120.0° | 120.0° |
C15 | C16 | H19 | 119.9° | 120.0° |
C12 | C13 | C14 | 120.1° | 120.1° |
C12 | C13 | H5 | 119.9° | 119.9° |
C13 | C12 | H17 | 120.0° | 120.0° |
C15 | C14 | C13 | 119.9° | 120.1° |
C14 | C15 | H6 | 120.0° | 120.0° |
C15 | C14 | H18 | 120.0° | 119.9° |
C14 | C13 | H5 | 120.0° | 120.0° |
C13 | C14 | H18 | 120.0° | 119.9° |
O1 | S1 | O2 | 109.2° | 123.2° |
O1 | S1 | NE1 | 109.9° | 106.4° |
O2 | S1 | NE1 | 109.5° | 106.4° |
S1 | NE1 | H10 | 109.5° | 120.0° |
S1 | NE1 | H11 | 109.5° | 120.0° |
H1 | C6 | H2 | 109.5° | 109.5° |
H3 | C8 | H4 | 109.5° | 109.4° |
H10 | NE1 | H11 | 109.5° | 120.0° |
H12 | CZ2 | H13 | 109.4° | 109.5° |
H14 | CZ3 | H15 | 109.5° | 109.5° |
H14 | CZ3 | H16 | 109.4° | 109.5° |
H15 | CZ3 | H16 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CZ3 | C8 | CZ2 | H3 | 120.2° | 120.0° |
CZ3 | C8 | CZ2 | H4 | 120.2° | 120.0° |
CZ3 | C8 | CZ2 | C6 | 175.2° | 180.0° |
CZ3 | C8 | H3 | H4 | 119.3° | 120.0° |
CZ3 | C8 | CZ2 | H12 | 55.0° | 60.0° |
CZ3 | C8 | CZ2 | H13 | 64.6° | 60.0° |
C8 | CZ3 | H14 | H15 | 120.0° | 120.0° |
C8 | CZ3 | H14 | H16 | 120.0° | 120.0° |
C8 | CZ3 | H15 | H16 | 120.0° | 120.1° |
C8 | CZ2 | C6 | H12 | 120.2° | 120.0° |
C8 | CZ2 | C6 | H13 | 120.2° | 120.0° |
C8 | CZ2 | C6 | N | 70.8° | 180.0° |
C8 | CZ2 | C6 | H1 | 49.7° | 60.0° |
C8 | CZ2 | C6 | H2 | 168.7° | 60.0° |
CZ2 | C8 | H3 | H4 | 119.3° | 120.0° |
C8 | CZ2 | H12 | H13 | 119.4° | 120.0° |
CZ2 | C8 | CZ3 | H14 | 180.0° | 60.0° |
CZ2 | C8 | CZ3 | H15 | 60.0° | 60.0° |
CZ2 | C8 | CZ3 | H16 | 60.0° | 180.0° |
CZ2 | C6 | N | H1 | 120.5° | 120.0° |
CZ2 | C6 | N | H2 | 120.5° | 120.0° |
CZ2 | C6 | N | CA | 122.0° | 180.0° |
CZ2 | C6 | H1 | H2 | 118.6° | 120.0° |
C6 | CZ2 | C8 | H3 | 64.6° | 60.0° |
C6 | CZ2 | C8 | H4 | 54.9° | 60.0° |
CZ2 | C6 | N | H7 | 116.4° | 0.0° |
C6 | CZ2 | H12 | H13 | 119.4° | 120.0° |
C6 | N | CA | H7 | 121.6° | 180.0° |
C6 | N | CA | CB | 3.0° | 0.3° |
C6 | N | CA | C | 176.9° | 180.0° |
N | C6 | H1 | H2 | 118.6° | 120.0° |
N | C6 | CZ2 | H12 | 169.0° | 60.0° |
N | C6 | CZ2 | H13 | 49.4° | 60.0° |
O4 | C17 | CG | CB | 21.3° | 180.0° |
O4 | C17 | CG | O5 | 179.7° | 180.0° |
O4 | C17 | CG | CD2 | 158.9° | 0.0° |
O4 | C17 | O5 | H20 | 0.0° | 0.0° |
N | CA | CB | C | 179.9° | 179.7° |
N | CA | CB | CG | 179.8° | 180.0° |
N | CA | C | O | 0.0° | 0.0° |
N | CA | C | C1 | 179.6° | 180.0° |
CA | N | C6 | H1 | 1.5° | 60.0° |
CA | N | C6 | H2 | 117.6° | 60.0° |
N | CA | CB | H8 | 0.2° | 0.0° |
CA | CB | CG | H8 | 180.0° | 180.0° |
CA | CB | CG | C17 | 179.9° | 180.0° |
CA | CB | CG | CD2 | 0.1° | 0.0° |
CB | CA | C | O | 179.9° | 179.7° |
CB | CA | C | C1 | 0.3° | 0.3° |
CB | CA | N | H7 | 118.6° | 179.7° |
CB | CG | C17 | CD2 | 179.7° | 180.0° |
CB | CG | C17 | O5 | 158.4° | 0.0° |
CG | CB | CA | C | 0.0° | 0.3° |
CB | CG | CD2 | C1 | 0.5° | 0.2° |
CB | CG | CD2 | H9 | 179.5° | 180.0° |
C17 | CG | CD2 | C1 | 179.8° | 179.7° |
C17 | CG | CB | H8 | 0.1° | 0.0° |
C17 | CG | CD2 | H9 | 0.2° | 0.0° |
CG | C17 | O5 | H20 | 179.7° | 180.0° |
O5 | C17 | CG | CD2 | 21.4° | 180.0° |
CA | C | O | C1 | 179.6° | 180.0° |
CA | C | C1 | CD2 | 0.6° | 0.0° |
CA | C | O | C11 | 78.5° | 90.0° |
CA | C | C1 | S1 | 179.8° | 180.0° |
C | CA | N | H7 | 61.5° | 0.0° |
C | CA | CB | H8 | 179.9° | 179.7° |
CG | CD2 | C1 | C | 0.7° | 0.2° |
CG | CD2 | C1 | H9 | 180.0° | 179.7° |
CG | CD2 | C1 | S1 | 179.7° | 179.7° |
CD2 | CG | CB | H8 | 179.8° | 180.0° |
O | C | C1 | CD2 | 179.8° | 180.0° |
O | C | C1 | S1 | 0.3° | 0.0° |
C | O | C11 | C16 | 13.2° | 180.0° |
C | O | C11 | C12 | 167.0° | 0.7° |
C | C1 | CD2 | S1 | 179.5° | 180.0° |
C1 | C | O | C11 | 102.0° | 89.9° |
C | C1 | S1 | O1 | 51.5° | 178.6° |
C | C1 | S1 | O2 | 171.1° | 48.5° |
C | C1 | S1 | NE1 | 68.9° | 65.0° |
C | C1 | CD2 | H9 | 179.3° | 180.0° |
CD2 | C1 | S1 | O1 | 128.9° | 1.5° |
CD2 | C1 | S1 | O2 | 9.4° | 131.4° |
CD2 | C1 | S1 | NE1 | 110.6° | 115.0° |
O | C11 | C16 | C12 | 179.8° | 179.2° |
O | C11 | C16 | C15 | 180.0° | 180.0° |
O | C11 | C12 | C13 | 180.0° | 179.8° |
O | C11 | C12 | H17 | 0.0° | 0.2° |
O | C11 | C16 | H19 | 0.0° | 0.0° |
C1 | S1 | O1 | O2 | 119.7° | 122.9° |
C1 | S1 | O1 | NE1 | 120.2° | 114.1° |
C1 | S1 | O2 | NE1 | 120.1° | 114.1° |
S1 | C1 | CD2 | H9 | 0.2° | 0.0° |
C1 | S1 | NE1 | H10 | 180.0° | 150.0° |
C1 | S1 | NE1 | H11 | 60.0° | 30.0° |
C11 | C16 | C15 | H19 | 180.0° | 179.9° |
C16 | C11 | C12 | C13 | 0.2° | 0.5° |
C11 | C16 | C15 | C14 | 0.1° | 0.5° |
C11 | C16 | C15 | H6 | 179.9° | 179.4° |
C16 | C11 | C12 | H17 | 179.8° | 179.4° |
C12 | C11 | C16 | C15 | 0.2° | 0.8° |
C11 | C12 | C13 | H17 | 180.0° | 180.0° |
C11 | C12 | C13 | C14 | 0.1° | 0.0° |
C11 | C12 | C13 | H5 | 179.9° | 179.7° |
C12 | C11 | C16 | H19 | 179.8° | 179.3° |
C16 | C15 | C14 | H6 | 180.0° | 180.0° |
C16 | C15 | C14 | C13 | 0.1° | 0.0° |
C16 | C15 | C14 | H18 | 179.9° | 180.0° |
C12 | C13 | C14 | C15 | 0.1° | 0.3° |
C12 | C13 | C14 | H5 | 180.0° | 179.7° |
C12 | C13 | C14 | H18 | 179.9° | 179.7° |
C15 | C14 | C13 | H18 | 180.0° | 180.0° |
C15 | C14 | C13 | H5 | 179.9° | 180.0° |
C14 | C15 | C16 | H19 | 179.9° | 179.5° |
C13 | C14 | C15 | H6 | 179.9° | 180.0° |
C14 | C13 | C12 | H17 | 179.9° | 180.0° |
O1 | S1 | O2 | NE1 | 120.4° | 123.0° |
O1 | S1 | NE1 | H10 | 60.0° | 96.5° |
O1 | S1 | NE1 | H11 | 180.0° | 83.5° |
O2 | S1 | NE1 | H10 | 60.0° | 36.5° |
O2 | S1 | NE1 | H11 | 60.0° | 143.6° |
S1 | NE1 | H10 | H11 | 120.0° | 180.0° |
H1 | C6 | N | H7 | 123.1° | 120.0° |
H1 | C6 | CZ2 | H12 | 70.5° | NaN° |
H1 | C6 | CZ2 | H13 | 169.9° | 60.0° |
H2 | C6 | N | H7 | 4.1° | 120.0° |
H2 | C6 | CZ2 | H12 | 48.5° | 60.0° |
H2 | C6 | CZ2 | H13 | 71.0° | 180.0° |
H3 | C8 | CZ2 | H12 | 175.2° | 180.0° |
H3 | C8 | CZ2 | H13 | 55.6° | 60.0° |
H3 | C8 | CZ3 | H14 | 59.8° | 180.0° |
H3 | C8 | CZ3 | H15 | 60.2° | 60.1° |
H3 | C8 | CZ3 | H16 | 179.8° | 60.0° |
H4 | C8 | CZ2 | H12 | 65.3° | 60.0° |
H4 | C8 | CZ2 | H13 | 175.2° | 180.0° |
H4 | C8 | CZ3 | H14 | 59.7° | 60.0° |
H4 | C8 | CZ3 | H15 | 179.8° | 180.0° |
H4 | C8 | CZ3 | H16 | 60.2° | 60.0° |
H5 | C13 | C12 | H17 | 0.1° | 0.3° |
H5 | C13 | C14 | H18 | 0.0° | 0.0° |
H6 | C15 | C14 | H18 | 0.0° | 0.0° |
H6 | C15 | C16 | H19 | 0.1° | 0.5° |
H14 | CZ3 | H15 | H16 | 119.9° | 120.0° |