829
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C6 | N1 | sing | 1.36Å | 1.36Å | |
| N1 | C1' | sing | 1.46Å | 1.50Å | |
| N1 | C2 | sing | 1.35Å | 1.36Å | |
| N3 | C2 | sing | 1.33Å | 1.37Å | |
| C2 | O2 | doub | 1.22Å | 1.25Å | |
| C4 | N3 | doub | 1.33Å | 1.35Å | |
| C5 | C4 | sing | 1.41Å | 1.39Å | |
| N4 | C4 | sing | 1.38Å | 1.35Å | |
| N4 | HN4 | sing | 0.97Å | 1.00Å | |
| N4 | HN4A | sing | 0.97Å | 1.00Å | |
| C5 | C6 | doub | 1.35Å | 1.39Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C6 | H6 | sing | 1.08Å | 1.08Å | |
| O15 | C07 | doub | 1.22Å | 1.22Å | |
| C13 | C07 | sing | 1.48Å | 1.53Å | |
| C07 | N5' | sing | 1.35Å | 1.35Å | |
| C09 | C08 | doub | 1.38Å | 1.41Å | Aromatic |
| C13 | C08 | sing | 1.40Å | 1.41Å | Aromatic |
| C08 | H08 | sing | 1.08Å | 1.08Å | |
| N10 | C09 | sing | 1.32Å | 1.36Å | Aromatic |
| C09 | H09 | sing | 1.08Å | 1.08Å | |
| C2' | C1' | sing | 1.54Å | 1.54Å | |
| C1' | O4' | sing | 1.44Å | 1.45Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C11 | N10 | doub | 1.32Å | 1.35Å | Aromatic |
| C11 | C12 | sing | 1.38Å | 1.40Å | Aromatic |
| C11 | H11 | sing | 1.08Å | 1.08Å | |
| C12 | C13 | doub | 1.40Å | 1.41Å | Aromatic |
| C12 | H12 | sing | 1.08Å | 1.08Å | |
| C3' | C2' | sing | 1.54Å | 1.53Å | |
| C2' | O2' | sing | 1.43Å | 1.44Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| C3' | C4' | sing | 1.54Å | 1.52Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C5' | C4' | sing | 1.53Å | 1.55Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| N5' | C5' | sing | 1.46Å | 1.47Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| N5' | HN5' | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C6 | N1 | C1' | 119.9° | 119.8° |
| C6 | N1 | C2 | 116.9° | 120.3° |
| N1 | C6 | C5 | 122.5° | 119.3° |
| N1 | C6 | H6 | 118.7° | 120.3° |
| C1' | N1 | C2 | 123.1° | 119.8° |
| N1 | C1' | C2' | 116.6° | 110.4° |
| N1 | C1' | O4' | 107.7° | 110.4° |
| N1 | C1' | H1' | 104.5° | 110.3° |
| N1 | C2 | N3 | 121.8° | 121.1° |
| N1 | C2 | O2 | 121.9° | 119.5° |
| N3 | C2 | O2 | 116.3° | 119.4° |
| C2 | N3 | C4 | 121.8° | 120.7° |
| N3 | C4 | C5 | 117.9° | 119.6° |
| N3 | C4 | N4 | 121.0° | 120.2° |
| C5 | C4 | N4 | 121.1° | 120.2° |
| C4 | C5 | C6 | 118.9° | 119.0° |
| C4 | C5 | H5 | 120.5° | 120.5° |
| C4 | N4 | HN4 | 120.0° | 120.0° |
| C4 | N4 | HN4A | 120.0° | 120.0° |
| HN4 | N4 | HN4A | 120.0° | 120.0° |
| C6 | C5 | H5 | 120.5° | 120.5° |
| C5 | C6 | H6 | 118.7° | 120.4° |
| O15 | C07 | C13 | 116.1° | 119.9° |
| O15 | C07 | N5' | 117.8° | 120.0° |
| C13 | C07 | N5' | 126.0° | 120.0° |
| C07 | C13 | C08 | 123.9° | 120.9° |
| C07 | C13 | C12 | 118.7° | 121.0° |
| C07 | N5' | C5' | 129.6° | 120.0° |
| C07 | N5' | HN5' | 115.2° | 120.0° |
| C09 | C08 | C13 | 120.3° | 119.0° |
| C09 | C08 | H08 | 119.9° | 120.5° |
| C08 | C09 | N10 | 120.4° | 120.9° |
| C08 | C09 | H09 | 119.8° | 119.5° |
| C13 | C08 | H08 | 119.8° | 120.5° |
| C08 | C13 | C12 | 117.3° | 118.1° |
| N10 | C09 | H09 | 119.8° | 119.6° |
| C09 | N10 | C11 | 120.7° | 122.1° |
| C2' | C1' | O4' | 104.6° | 104.8° |
| C2' | C1' | H1' | 107.5° | 110.4° |
| C1' | C2' | C3' | 105.1° | 104.1° |
| C1' | C2' | O2' | 112.5° | 110.6° |
| C1' | C2' | H2' | 109.8° | 110.5° |
| O4' | C1' | H1' | 116.5° | 110.3° |
| C1' | O4' | C4' | 111.2° | 105.3° |
| N10 | C11 | C12 | 121.0° | 120.8° |
| N10 | C11 | H11 | 119.5° | 119.6° |
| C12 | C11 | H11 | 119.5° | 119.6° |
| C11 | C12 | C13 | 120.2° | 119.1° |
| C11 | C12 | H12 | 119.9° | 120.5° |
| C13 | C12 | H12 | 119.9° | 120.5° |
| C3' | C2' | O2' | 107.6° | 110.5° |
| C3' | C2' | H2' | 114.5° | 110.6° |
| C2' | C3' | O3' | 114.8° | 110.5° |
| C2' | C3' | C4' | 101.8° | 104.0° |
| C2' | C3' | H3' | 112.0° | 110.6° |
| O2' | C2' | H2' | 107.4° | 110.4° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| O3' | C3' | C4' | 111.7° | 110.5° |
| O3' | C3' | H3' | 102.1° | 110.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C4' | C3' | H3' | 115.1° | 110.5° |
| C3' | C4' | C5' | 113.6° | 110.4° |
| C3' | C4' | O4' | 105.3° | 104.8° |
| C3' | C4' | H4' | 114.1° | 110.4° |
| C5' | C4' | O4' | 120.0° | 110.3° |
| C5' | C4' | H4' | 97.1° | 110.4° |
| C4' | C5' | N5' | 120.2° | 109.5° |
| C4' | C5' | H5' | 106.0° | 109.4° |
| C4' | C5' | H5'A | 106.0° | 109.5° |
| O4' | C4' | H4' | 106.8° | 110.3° |
| N5' | C5' | H5' | 106.0° | 109.5° |
| N5' | C5' | H5'A | 106.0° | 109.5° |
| C5' | N5' | HN5' | 115.2° | 120.1° |
| H5' | C5' | H5'A | 112.7° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C6 | N1 | C1' | C2 | 176.9° | 179.6° |
| C6 | N1 | C2 | N3 | 1.4° | 0.3° |
| C6 | N1 | C2 | O2 | 179.1° | 179.7° |
| N1 | C6 | C5 | C4 | 0.7° | 0.6° |
| N1 | C6 | C5 | H6 | 180.0° | 179.4° |
| N1 | C6 | C5 | H5 | 179.3° | 179.7° |
| C6 | N1 | C1' | C2' | 54.1° | 117.9° |
| C6 | N1 | C1' | O4' | 62.9° | 126.8° |
| C6 | N1 | C1' | H1' | 172.7° | 4.5° |
| C1' | N1 | C2 | N3 | 178.3° | 180.0° |
| C1' | N1 | C2 | O2 | 2.2° | 0.1° |
| C1' | N1 | C6 | C5 | 178.5° | 179.7° |
| C1' | N1 | C6 | H6 | 1.5° | 0.3° |
| N1 | C1' | C2' | O4' | 118.7° | 118.8° |
| N1 | C1' | C2' | H1' | 116.9° | 122.3° |
| N1 | C1' | O4' | H1' | 116.9° | 122.2° |
| N1 | C1' | C2' | C3' | 97.6° | 142.8° |
| N1 | C1' | C2' | O2' | 145.7° | 98.5° |
| N1 | C1' | C2' | H2' | 26.1° | 24.0° |
| N1 | C1' | O4' | C4' | 124.5° | 159.3° |
| N1 | C2 | N3 | O2 | 179.5° | 180.0° |
| N1 | C2 | N3 | C4 | 0.5° | 0.0° |
| C2 | N1 | C6 | C5 | 1.4° | 0.6° |
| C2 | N1 | C6 | H6 | 178.6° | 179.9° |
| C2 | N1 | C1' | C2' | 129.0° | 61.8° |
| C2 | N1 | C1' | O4' | 114.0° | 53.6° |
| C2 | N1 | C1' | H1' | 10.4° | 175.8° |
| C2 | N3 | C4 | C5 | 0.3° | 0.0° |
| C2 | N3 | C4 | N4 | 179.9° | 179.9° |
| O2 | C2 | N3 | C4 | 180.0° | 180.0° |
| N3 | C4 | C5 | N4 | 179.8° | 179.9° |
| N3 | C4 | N4 | HN4 | 0.0° | 0.1° |
| N3 | C4 | N4 | HN4A | 180.0° | 180.0° |
| N3 | C4 | C5 | C6 | 0.2° | 0.3° |
| N3 | C4 | C5 | H5 | 179.8° | 180.0° |
| C5 | C4 | N4 | HN4 | 179.8° | 180.0° |
| C5 | C4 | N4 | HN4A | 0.2° | 0.1° |
| C4 | C5 | C6 | H5 | 180.0° | 179.7° |
| C4 | C5 | C6 | H6 | 179.3° | 180.0° |
| C4 | N4 | HN4 | HN4A | 180.0° | 180.0° |
| N4 | C4 | C5 | C6 | 180.0° | 179.6° |
| N4 | C4 | C5 | H5 | 0.0° | 0.1° |
| H5 | C5 | C6 | H6 | 0.7° | 0.3° |
| O15 | C07 | C13 | N5' | 178.5° | 180.0° |
| O15 | C07 | C13 | C08 | 143.3° | 179.5° |
| O15 | C07 | C13 | C12 | 34.6° | 0.0° |
| O15 | C07 | N5' | C5' | 122.9° | 0.0° |
| O15 | C07 | N5' | HN5' | 57.1° | 179.9° |
| C07 | C13 | C08 | C09 | 178.9° | 180.0° |
| C07 | C13 | C08 | C12 | 177.9° | 179.5° |
| C07 | C13 | C08 | H08 | 1.1° | 0.2° |
| C07 | C13 | C12 | C11 | 179.2° | 179.9° |
| C07 | C13 | C12 | H12 | 0.8° | 0.2° |
| C13 | C07 | N5' | C5' | 58.6° | 180.0° |
| C13 | C07 | N5' | HN5' | 121.4° | 0.1° |
| N5' | C07 | C13 | C08 | 38.2° | 0.5° |
| N5' | C07 | C13 | C12 | 143.9° | 180.0° |
| C07 | N5' | C5' | C4' | 93.0° | 180.0° |
| C07 | N5' | C5' | HN5' | 180.0° | 179.9° |
| C07 | N5' | C5' | H5' | 147.0° | 60.1° |
| C07 | N5' | C5' | H5'A | 27.0° | 60.0° |
| C09 | C08 | C13 | H08 | 180.0° | 179.7° |
| C08 | C09 | N10 | H09 | 180.0° | 180.0° |
| C08 | C09 | N10 | C11 | 0.3° | 0.0° |
| C09 | C08 | C13 | C12 | 0.9° | 0.5° |
| C13 | C08 | C09 | N10 | 0.5° | 0.2° |
| C13 | C08 | C09 | H09 | 179.5° | 179.8° |
| C08 | C13 | C12 | C11 | 1.1° | 0.6° |
| C08 | C13 | C12 | H12 | 178.9° | 179.8° |
| H08 | C08 | C09 | N10 | 179.5° | 180.0° |
| H08 | C08 | C09 | H09 | 0.5° | 0.0° |
| H08 | C08 | C13 | C12 | 179.1° | 179.8° |
| C09 | N10 | C11 | C12 | 0.4° | 0.0° |
| C09 | N10 | C11 | H11 | 179.6° | 179.9° |
| H09 | C09 | N10 | C11 | 179.8° | 180.0° |
| C2' | C1' | O4' | H1' | 118.5° | 118.9° |
| C1' | C2' | C3' | O2' | 120.1° | 118.7° |
| C1' | C2' | C3' | H2' | 120.6° | 118.7° |
| C1' | C2' | O2' | H2' | 121.0° | 122.6° |
| C1' | C2' | O2' | HO2' | 180.0° | 180.0° |
| C1' | C2' | C3' | O3' | 153.8° | 118.6° |
| C1' | C2' | C3' | C4' | 33.0° | 0.0° |
| C1' | C2' | C3' | H3' | 90.4° | 118.6° |
| C2' | C1' | O4' | C4' | 0.1° | 40.5° |
| O4' | C1' | C2' | C3' | 21.2° | 23.9° |
| O4' | C1' | C2' | O2' | 95.6° | 142.6° |
| O4' | C1' | C2' | H2' | 144.8° | 94.8° |
| C1' | O4' | C4' | C3' | 21.1° | 40.5° |
| C1' | O4' | C4' | C5' | 150.7° | 159.4° |
| C1' | O4' | C4' | H4' | 100.6° | 78.4° |
| H1' | C1' | C2' | C3' | 145.6° | 94.9° |
| H1' | C1' | C2' | O2' | 28.8° | 23.8° |
| H1' | C1' | C2' | H2' | 90.8° | 146.4° |
| H1' | C1' | O4' | C4' | 118.6° | 78.4° |
| N10 | C11 | C12 | H11 | 180.0° | 179.9° |
| N10 | C11 | C12 | C13 | 0.9° | 0.3° |
| N10 | C11 | C12 | H12 | 179.1° | 180.0° |
| C11 | C12 | C13 | H12 | 180.0° | 179.7° |
| H11 | C11 | C12 | C13 | 179.1° | 179.8° |
| H11 | C11 | C12 | H12 | 0.9° | 0.1° |
| C3' | C2' | O2' | H2' | 123.8° | 122.7° |
| C3' | C2' | O2' | HO2' | 64.7° | 65.3° |
| C2' | C3' | O3' | C4' | 115.2° | 114.6° |
| C2' | C3' | O3' | H3' | 121.4° | 122.8° |
| C2' | C3' | C4' | H3' | 121.3° | 118.7° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.5° |
| C2' | C3' | C4' | C5' | 166.2° | 142.8° |
| C2' | C3' | C4' | O4' | 33.0° | 24.0° |
| C2' | C3' | C4' | H4' | 83.8° | 94.8° |
| O2' | C2' | C3' | O3' | 33.7° | 0.1° |
| O2' | C2' | C3' | C4' | 87.1° | 118.7° |
| O2' | C2' | C3' | H3' | 149.5° | 122.7° |
| H2' | C2' | O2' | HO2' | 59.1° | 57.4° |
| H2' | C2' | C3' | O3' | 85.6° | 122.7° |
| H2' | C2' | C3' | C4' | 153.6° | 118.7° |
| H2' | C2' | C3' | H3' | 30.2° | 0.1° |
| O3' | C3' | C4' | H3' | 115.8° | 122.7° |
| O3' | C3' | C4' | C5' | 70.9° | 98.5° |
| O3' | C3' | C4' | O4' | 155.9° | 142.6° |
| O3' | C3' | C4' | H4' | 39.2° | 23.8° |
| C4' | C3' | O3' | HO3' | 64.8° | 176.1° |
| C3' | C4' | C5' | O4' | 125.7° | 115.4° |
| C3' | C4' | C5' | H4' | 120.3° | 122.4° |
| C3' | C4' | O4' | H4' | 121.7° | 118.9° |
| C3' | C4' | C5' | N5' | 59.6° | 175.0° |
| C3' | C4' | C5' | H5' | 179.6° | 55.0° |
| C3' | C4' | C5' | H5'A | 60.4° | 65.0° |
| H3' | C3' | O3' | HO3' | 58.6° | 61.3° |
| H3' | C3' | C4' | C5' | 44.9° | 24.1° |
| H3' | C3' | C4' | O4' | 88.3° | 94.7° |
| H3' | C3' | C4' | H4' | 154.9° | 146.5° |
| C5' | C4' | O4' | H4' | 108.8° | 122.3° |
| C4' | C5' | N5' | H5' | 120.0° | 120.0° |
| C4' | C5' | N5' | H5'A | 120.0° | 120.0° |
| C4' | C5' | H5' | H5'A | 115.6° | 120.0° |
| C4' | C5' | N5' | HN5' | 87.0° | 0.1° |
| O4' | C4' | C5' | N5' | 66.1° | 69.6° |
| O4' | C4' | C5' | H5' | 53.9° | 170.4° |
| O4' | C4' | C5' | H5'A | 173.9° | 50.4° |
| H4' | C4' | C5' | N5' | 179.9° | 52.6° |
| H4' | C4' | C5' | H5' | 60.1° | 67.3° |
| H4' | C4' | C5' | H5'A | 59.9° | 172.7° |
| N5' | C5' | H5' | H5'A | 115.5° | 120.1° |
| H5' | C5' | N5' | HN5' | 33.0° | 120.0° |
| H5'A | C5' | N5' | HN5' | 153.0° | 119.9° |
