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81D

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O37C37sing1.43Å1.41Å
O3PPdoub1.48Å1.53Å
C14C15doub1.38Å1.36ÅAromatic
C14C13sing1.39Å1.38ÅAromatic
C37C36sing1.53Å1.52Å
C15C16sing1.39Å1.41ÅAromatic
C36O35sing1.43Å1.42Å
CLC13sing1.74Å1.69Å
C13C11doub1.38Å1.42ÅAromatic
O1PPsing1.61Å1.53Å
C16O35sing1.36Å1.35Å
C16C12doub1.38Å1.38ÅAromatic
PO2Psing1.61Å1.45Å
PO5'sing1.61Å1.58Å
C11C12sing1.39Å1.37ÅAromatic
C11C10sing1.51Å1.55Å
C12Bsing1.56Å1.61Å
O3'Bsing1.37Å1.54Å
O3'C3'sing1.45Å1.42Å
C10O1sing1.44Å1.45Å
C10C33sing1.53Å1.50Å
C5'O5'sing1.43Å1.41Å
C5'C4'sing1.53Å1.50Å
O1Bsing1.37Å1.54Å
BO2'sing1.37Å1.36Å
C4'C3'sing1.54Å1.53Å
C4'O4'sing1.44Å1.47Å
C3'C2'sing1.56Å1.52Å
C33N34sing1.47Å1.50Å
O2'C2'sing1.44Å1.43Å
O4'C1'sing1.44Å1.40Å
C2'C1'sing1.55Å1.53Å
C1'N9sing1.46Å1.49Å
C8N9sing1.36Å1.37ÅAromatic
C8N7doub1.30Å1.29ÅAromatic
N9C4sing1.37Å1.36ÅAromatic
N7C5sing1.36Å1.39ÅAromatic
C4C5doub1.40Å1.39ÅAromatic
C4N3sing1.33Å1.36ÅAromatic
C5C6sing1.41Å1.39ÅAromatic
N3C2doub1.32Å1.34ÅAromatic
C6N6sing1.38Å1.36Å
C6N1doub1.33Å1.36ÅAromatic
C2N1sing1.32Å1.34ÅAromatic
C8H81sing1.08Å1.08Å
C2H21sing1.08Å1.08Å
O1PH1sing0.97Å0.95Å
O2PH2sing0.97Å0.95Å
C5'H5'2sing1.09Å1.10Å
C5'H5'1sing1.09Å1.10Å
C4'H4'1sing1.09Å1.10Å
C3'H3'1sing1.09Å1.10Å
C1'H1'1sing1.09Å1.10Å
C2'H2'1sing1.09Å1.10Å
C36H362sing1.09Å1.10Å
C36H361sing1.09Å1.10Å
C15H151sing1.08Å1.08Å
C14H141sing1.08Å1.08Å
C10H3sing1.09Å1.10Å
C33H332sing1.09Å1.10Å
C33H331sing1.09Å1.10Å
N34H341sing1.01Å1.00Å
N34H342sing1.01Å1.00Å
N6H62sing0.97Å1.00Å
N6H61sing0.97Å1.00Å
C37H5sing1.09Å1.10Å
C37H6sing1.09Å1.10Å
O37H7sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O37C37C36113.4°109.5°
O37C37H5108.5°109.5°
O37C37H6108.5°109.5°
C37O37H7109.5°114.0°
O3PPO1P108.2°109.5°
O3PPO2P113.8°109.5°
O3PPO5'108.8°109.5°
C15C14C13120.8°120.2°
C14C15C16121.5°120.0°
C14C15H151119.2°120.0°
C15C14H141119.6°119.9°
C14C13CL121.9°120.1°
C14C13C11117.0°119.9°
C13C14H141119.6°119.9°
C37C36O35109.9°109.5°
C37C36H362109.4°109.4°
C37C36H361109.4°109.5°
C36C37H5108.5°109.5°
C36C37H6108.5°109.4°
C15C16O35121.9°120.1°
C15C16C12118.8°119.7°
C16C15H151119.2°120.0°
C36O35C16123.6°117.0°
O35C36H362109.4°109.5°
O35C36H361109.4°109.4°
CLC13C11121.1°120.0°
C13C11C12123.0°120.1°
C13C11C10126.5°133.5°
O1PPO2P113.3°109.5°
O1PPO5'104.9°109.5°
PO1PH1109.5°114.0°
O35C16C12119.2°120.1°
C16C12C11118.8°120.1°
C16C12B130.0°133.8°
O2PPO5'107.4°109.5°
PO2PH2109.5°114.0°
PO5'C5'122.0°123.0°
C12C11C10110.4°106.4°
C11C12B110.9°106.1°
C11C10O1103.3°106.5°
C11C10C33111.3°110.0°
C11C10H3109.8°110.1°
C12BO3'116.4°110.3°
C12BO197.9°106.3°
C12BO2'120.6°110.7°
BO3'C3'105.4°104.0°
O3'BO1103.6°110.1°
O3'BO2'107.2°108.8°
O3'C3'C4'113.7°108.7°
O3'C3'C2'106.3°101.6°
O3'C3'H3'1111.9°114.2°
O1C10C33110.7°110.0°
C10O1B112.3°106.0°
O1C10H3111.2°110.0°
C10C33N34111.6°109.4°
C33C10H3110.5°110.1°
C10C33H332108.9°109.5°
C10C33H331108.9°109.5°
O5'C5'C4'111.0°109.5°
O5'C5'H5'2109.1°109.5°
O5'C5'H5'1109.1°109.5°
C5'C4'C3'116.5°109.8°
C5'C4'O4'107.3°109.9°
C4'C5'H5'2109.1°109.5°
C4'C5'H5'1109.1°109.5°
C5'C4'H4'1108.7°109.8°
O1BO2'109.3°110.6°
BO2'C2'110.9°107.5°
C3'C4'O4'106.8°107.4°
C4'C3'C2'104.3°104.1°
C3'C4'H4'1108.3°109.9°
C4'C3'H3'1110.1°113.4°
C4'O4'C1'109.8°107.0°
O4'C4'H4'1109.1°110.0°
C3'C2'O2'103.1°103.3°
C3'C2'C1'104.4°102.2°
C2'C3'H3'1110.2°113.7°
C3'C2'H2'1112.3°113.8°
N34C33H332108.9°109.5°
N34C33H331109.0°109.5°
C33N34H341109.5°111.0°
C33N34H342109.5°111.1°
O2'C2'C1'110.5°108.5°
O2'C2'H2'1113.7°114.2°
O4'C1'C2'105.9°104.0°
O4'C1'N9112.7°110.5°
O4'C1'H1'1110.0°110.5°
C2'C1'N9111.2°110.5°
C2'C1'H1'1108.3°110.6°
C1'C2'H2'1112.1°113.6°
C1'N9C8128.7°126.3°
C1'N9C4125.0°126.3°
N9C1'H1'1108.7°110.5°
N9C8N7113.2°110.0°
C8N9C4106.1°107.4°
N9C8H81123.4°125.0°
C8N7C5105.5°109.4°
N7C8H81123.4°125.0°
N9C4C5107.0°106.0°
N9C4N3128.6°134.9°
N7C5C4108.3°107.2°
N7C5C6134.6°134.6°
C5C4N3124.4°119.1°
C4C5C6117.1°118.2°
C4N3C2114.0°120.6°
C5C6N6121.1°120.8°
C5C6N1119.1°118.4°
N3C2N1126.0°122.5°
N3C2H21117.0°118.7°
N6C6N1119.8°120.8°
C6N6H62109.5°120.0°
C6N6H61109.5°119.9°
C6N1C2119.1°121.2°
N1C2H21117.0°118.8°
H5'2C5'H5'1109.5°109.4°
H362C36H361109.5°109.5°
H332C33H331109.5°109.5°
H341N34H342109.5°111.0°
H62N6H61109.5°120.1°
H5C37H6109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O37C37C36H5120.6°120.1°
O37C37C36H6120.6°120.0°
O37C37C36O3560.4°65.0°
O37C37C36H36259.7°55.0°
O37C37C36H361179.6°175.0°
O37C37H5H6118.2°120.0°
O3PPO1PO2P127.2°120.0°
O3PPO1PO5'116.0°120.0°
O3PPO2PO5'120.4°120.0°
O3PPO5'C5'70.5°55.0°
O3PPO1PH10.0°179.9°
O3PPO2PH20.0°60.0°
C15C14C13H141180.0°180.0°
C14C15C16H151180.0°180.0°
C15C14C13CL176.6°180.0°
C15C14C13C110.9°0.0°
C14C15C16O35177.5°180.0°
C14C15C16C120.9°0.0°
C13C14C15C160.7°0.0°
C14C13CLC11177.4°180.0°
C14C13C11C121.3°0.0°
C14C13C11C10177.3°179.9°
C13C14C15H151179.3°180.0°
C37C36O35H362120.1°120.0°
C37C36O35H361120.0°120.0°
C37C36O35C16163.7°180.0°
C37C36H362H361119.8°120.0°
C36C37H5H6118.2°119.9°
C36C37O37H7168.3°180.0°
C15C16O35C364.4°0.0°
C15C16O35C12176.7°180.0°
C15C16C12C111.2°0.0°
C15C16C12B174.3°179.9°
C16C15C14H141179.3°180.0°
C36O35C16C12172.3°180.0°
O35C36H362H361119.8°120.0°
O35C36C37H5179.1°174.9°
O35C36C37H660.2°55.1°
CLC13C11C12176.3°180.0°
CLC13C11C105.1°0.2°
CLC13C14H1413.3°0.1°
C13C11C12C161.5°0.0°
C13C11C12C10178.8°179.9°
C13C11C12B175.8°180.0°
C13C11C10O1170.1°162.7°
C13C11C10C3371.1°43.5°
C11C13C14H141179.1°180.0°
C13C11C10H351.5°78.0°
O1PPO2PO5'115.4°120.0°
O1PPO5'C5'45.0°65.0°
O1PPO2PH2124.1°60.0°
O35C16C12C11178.0°180.0°
O35C16C12B9.0°0.1°
C16O35C36H36243.6°60.0°
C16O35C36H36176.3°60.0°
O35C16C15H1512.4°0.0°
C16C12C11B174.3°179.9°
C16C12C11C10177.3°179.9°
C16C12BO3'62.2°78.7°
C16C12BO1171.7°161.9°
C16C12BO2'70.3°41.8°
C12C16C15H151179.1°180.0°
O2PPO5'C5'165.9°175.0°
O2PPO1PH1127.2°59.9°
PO5'C5'C4'142.3°180.0°
O5'PO1PH1116.0°60.1°
O5'PO2PH2120.5°180.0°
PO5'C5'H5'297.5°60.0°
PO5'C5'H5'122.0°59.9°
C11C12BO3'124.3°101.4°
C12C11C10O111.1°17.4°
C12C11C10C33107.6°136.6°
C11C12BO114.8°18.0°
C11C12BO2'103.2°138.2°
C12C11C10H3129.8°101.9°
C10C11C12B3.0°0.1°
C11C10O1C33119.2°119.2°
C11C10O1H3117.7°119.3°
C11C10C33H3122.2°121.5°
C11C10O1B21.9°29.2°
C11C10C33N3459.6°176.5°
C11C10C33H332179.9°56.5°
C11C10C33H33160.7°63.5°
C12BO3'O1106.1°117.1°
C12BO3'O2'138.3°121.6°
C12BO3'C3'133.7°161.4°
C12BO1C1022.6°28.8°
C12BO1O2'126.4°120.2°
C12BO2'C2'149.4°148.8°
O3'BO1C10142.2°90.7°
O3'BO1O2'114.0°120.3°
BO3'C3'C4'94.9°143.6°
BO3'C3'C2'19.2°34.1°
O3'BO2'C2'13.2°27.5°
BO3'C3'H3'1139.6°88.7°
O3'C3'C4'C5'118.3°128.3°
C3'O3'BO1120.2°81.5°
C3'O3'BO2'4.7°39.9°
O3'C3'C4'C2'115.3°107.7°
O3'C3'C4'H3'1126.4°128.2°
O3'C3'C4'O4'121.9°112.2°
O3'C3'C2'H3'1121.4°123.2°
O3'C3'C2'O2'26.7°18.1°
O3'C3'C2'C1'142.3°94.5°
O3'C3'C4'H4'14.5°7.4°
O3'C3'C2'H2'196.1°142.6°
O1C10C33H3123.5°121.4°
C10O1BO2'103.8°149.0°
O1C10C33N3454.7°66.5°
O1C10C33H33265.6°173.5°
O1C10C33H331175.0°53.5°
C33C10O1B97.3°148.5°
C10C33N34H332120.3°120.0°
C10C33N34H331120.3°120.0°
C10C33H332H331119.0°120.0°
C10C33N34H341180.0°180.0°
C10C33N34H34260.0°56.1°
O5'C5'C4'H5'2120.2°120.0°
O5'C5'C4'H5'1120.2°120.0°
O5'C5'C4'C3'175.7°175.0°
O5'C5'C4'O4'56.1°67.1°
O5'C5'H5'2H5'1119.3°120.0°
O5'C5'C4'H4'161.7°54.1°
C5'C4'C3'O4'119.8°119.5°
C5'C4'C3'H4'1122.8°120.9°
C5'C4'O4'H4'1117.6°121.0°
C5'C4'C3'C2'126.4°124.0°
C5'C4'O4'C1'112.7°147.4°
C4'C5'H5'2H5'1119.3°120.0°
C5'C4'C3'H3'18.2°0.1°
O1BO2'C2'98.4°93.6°
BO1C10H3139.5°90.1°
BO2'C2'C3'24.5°4.4°
BO2'C2'C1'135.6°112.3°
BO2'C2'H2'197.3°119.8°
C3'C4'O4'H4'1116.8°119.5°
C4'C3'C2'H3'1118.1°123.9°
C4'C3'C2'O2'93.7°131.1°
C3'C4'O4'C1'12.9°28.0°
C4'C3'C2'C1'21.8°18.4°
C3'C4'C5'H5'255.4°65.0°
C3'C4'C5'H5'164.1°55.0°
C4'C3'C2'H2'1143.5°104.5°
O4'C4'C3'C2'6.6°4.5°
C4'O4'C1'C2'27.0°40.0°
C4'O4'C1'N994.8°158.7°
O4'C4'C5'H5'264.1°52.9°
O4'C4'C5'H5'1176.4°172.9°
O4'C4'C3'H3'1111.6°119.6°
C4'O4'C1'H1'1143.8°78.7°
C3'C2'O2'C1'111.1°107.9°
C3'C2'O2'H2'1121.8°124.2°
C3'C2'C1'O4'30.3°35.4°
C3'C2'C1'H2'1121.8°123.0°
C3'C2'C1'N992.4°154.0°
C2'C3'C4'H4'1110.8°115.1°
C3'C2'C1'H1'1148.2°83.3°
N34C33C10H3178.2°55.0°
N34C33H332H331119.1°120.0°
C33N34H341H342120.0°124.0°
O2'C2'C1'O4'79.9°144.1°
O2'C2'C1'H2'1128.0°128.2°
O2'C2'C1'N9157.4°97.3°
O2'C2'C3'H3'1148.1°105.0°
O2'C2'C1'H1'138.0°25.4°
O4'C1'C2'N9122.7°118.6°
O4'C1'C2'H1'1117.9°118.7°
O4'C1'N9H1'1122.2°122.6°
O4'C1'N9C889.8°23.5°
O4'C1'N9C495.3°156.8°
C1'O4'C4'H4'1129.7°91.6°
O4'C1'C2'H2'1152.1°87.7°
C2'C1'N9H1'1119.1°122.8°
C2'C1'N9C828.9°91.0°
C2'C1'N9C4146.0°88.6°
C1'C2'C3'H3'196.4°142.3°
C1'N9C8C4175.7°179.7°
C1'N9C8N7177.2°180.0°
C1'N9C4C5176.6°179.7°
C1'N9C4N32.1°0.0°
C1'N9C8H812.9°0.1°
N9C1'C2'H2'129.4°31.0°
N9C8N7H81180.0°179.9°
N9C8N7C51.5°0.4°
C8N9C4C50.7°0.0°
C8N9C4N3178.0°179.7°
C8N9C1'H1'1148.0°146.2°
N7C8N9C41.5°0.3°
C8N7C5C41.0°0.4°
C8N7C5C6176.3°179.6°
N9C4C5N70.1°0.2°
N9C4C5N3178.8°179.8°
N9C4C5C6177.7°179.8°
N9C4N3C2176.3°179.7°
C4N9C8H81178.5°179.8°
C4N9C1'H1'126.9°34.2°
N7C5C4C6177.9°180.0°
N7C5C4N3178.9°180.0°
N7C5C6N62.4°0.0°
N7C5C6N1178.9°180.0°
C5N7C8H81178.5°179.6°
C5C4N3C22.2°0.0°
C4C5C6N6179.5°180.0°
C4C5C6N11.7°0.0°
N3C4C5C61.1°0.0°
C4N3C2N14.5°0.0°
C4N3C2H21175.5°180.0°
C5C6N6N1178.7°180.0°
C5C6N1C23.7°0.1°
C5C6N6H62178.7°180.0°
C5C6N6H6158.7°0.0°
N3C2N1C65.4°0.1°
N3C2N1H21180.0°180.0°
N6C6N1C2177.5°179.9°
C6N6H62H61120.0°180.0°
C6N1C2H21174.6°179.9°
N1C6N6H620.0°0.0°
N1C6N6H61120.0°180.0°
H5'2C5'C4'H4'1178.0°174.0°
H5'1C5'C4'H4'158.5°66.0°
H4'1C4'C3'H3'1131.0°120.8°
H3'1C3'C2'H2'125.3°19.4°
H1'1C1'C2'H2'190.0°153.7°
H362C36C37H560.8°65.1°
H362C36C37H6179.7°175.0°
H361C36C37H559.0°55.0°
H361C36C37H659.8°64.9°
H151C15C14H1410.7°0.1°
H3C10C33H33257.9°65.0°
H3C10C33H33161.5°174.9°
H332C33N34H34159.7°60.0°
H332C33N34H342179.7°176.0°
H331C33N34H34159.7°60.0°
H331C33N34H34260.3°63.9°
H5C37O37H771.1°59.9°
H6C37O37H747.7°60.0°

248942

PDB entries from 2026-02-11

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