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Summary Geometry Related PDB entries

7ZE

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C11	C10	sing	1.39Å	1.40Å	Aromatic
C11	C12	doub	1.37Å	1.39Å	Aromatic
C10	N9	doub	1.31Å	1.35Å	Aromatic
N9	C8	sing	1.34Å	1.35Å	Aromatic
C12	C13	sing	1.41Å	1.40Å	Aromatic
C8	C13	doub	1.42Å	1.40Å	Aromatic
C8	C7	sing	1.41Å	1.40Å	Aromatic
C13	C4	sing	1.40Å	1.40Å	Aromatic
O1	N2	doub	1.22Å	1.23Å
C7	C6	doub	1.36Å	1.39Å	Aromatic
C4	N2	sing	1.48Å	1.34Å
C4	C5	doub	1.36Å	1.40Å	Aromatic
N2	O3	sing	1.22Å	1.23Å
C6	C5	sing	1.39Å	1.39Å	Aromatic
C5	H1	sing	1.08Å	1.08Å
C6	H2	sing	1.08Å	1.08Å
C7	H3	sing	1.08Å	1.08Å
C10	H4	sing	1.08Å	1.08Å
C11	H5	sing	1.08Å	1.08Å
C12	H6	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C10	C11	C12	118.9°	120.0°
C11	C10	N9	121.4°	121.8°
C11	C10	H4	119.3°	119.2°
C10	C11	H5	120.6°	120.0°
C11	C12	C13	119.5°	118.1°
C12	C11	H5	120.5°	120.0°
C11	C12	H6	120.2°	120.9°
C10	N9	C8	120.3°	121.3°
N9	C10	H4	119.3°	119.1°
N9	C8	C13	120.8°	119.9°
N9	C8	C7	119.1°	121.0°
C12	C13	C8	119.1°	119.0°
C12	C13	C4	121.5°	121.4°
C13	C12	H6	120.2°	120.9°
C13	C8	C7	120.2°	119.1°
C8	C13	C4	119.3°	119.6°
C8	C7	C6	120.3°	119.7°
C8	C7	H3	119.8°	120.1°
C13	C4	N2	121.1°	120.2°
C13	C4	C5	120.3°	119.6°
O1	N2	C4	122.4°	120.0°
O1	N2	O3	119.8°	120.0°
C7	C6	C5	119.8°	121.1°
C7	C6	H2	120.1°	119.5°
C6	C7	H3	119.9°	120.1°
N2	C4	C5	118.6°	120.2°
C4	N2	O3	117.8°	120.0°
C4	C5	C6	120.1°	120.9°
C4	C5	H1	120.0°	119.5°
C6	C5	H1	120.0°	119.6°
C5	C6	H2	120.1°	119.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C10	C11	C12	H5	180.0°	180.0°
C11	C10	N9	H4	180.0°	180.0°
C11	C10	N9	C8	0.6°	0.0°
C10	C11	C12	C13	0.7°	0.0°
C10	C11	C12	H6	179.3°	180.0°
C12	C11	C10	N9	0.1°	0.0°
C11	C12	C13	H6	180.0°	180.0°
C11	C12	C13	C8	0.6°	0.1°
C11	C12	C13	C4	179.4°	179.9°
C12	C11	C10	H4	179.9°	180.0°
C10	N9	C8	C13	0.7°	0.0°
C10	N9	C8	C7	179.3°	179.4°
N9	C10	C11	H5	179.9°	180.0°
N9	C8	C13	C12	0.1°	0.0°
N9	C8	C13	C7	180.0°	179.4°
N9	C8	C13	C4	179.8°	179.9°
N9	C8	C7	C6	179.8°	179.7°
N9	C8	C7	H3	0.1°	0.3°
C8	N9	C10	H4	179.4°	180.0°
C12	C13	C8	C4	179.9°	179.9°
C12	C13	C8	C7	179.9°	179.4°
C12	C13	C4	N2	0.0°	0.4°
C12	C13	C4	C5	179.8°	179.4°
C13	C12	C11	H5	179.3°	180.0°
C13	C8	C7	C6	0.2°	0.2°
C8	C13	C4	N2	180.0°	179.7°
C8	C13	C4	C5	0.2°	0.5°
C13	C8	C7	H3	179.8°	179.8°
C8	C13	C12	H6	179.4°	180.0°
C7	C8	C13	C4	0.2°	0.5°
C8	C7	C6	H3	180.0°	180.0°
C8	C7	C6	C5	0.2°	0.0°
C8	C7	C6	H2	179.8°	180.0°
C13	C4	N2	O1	14.7°	37.8°
C13	C4	N2	C5	179.8°	179.8°
C13	C4	N2	O3	165.7°	141.9°
C13	C4	C5	C6	0.3°	0.2°
C13	C4	C5	H1	179.8°	179.8°
C4	C13	C12	H6	0.6°	0.1°
O1	N2	C4	O3	179.6°	179.7°
O1	N2	C4	C5	165.1°	142.4°
C7	C6	C5	C4	0.3°	0.0°
C7	C6	C5	H2	180.0°	180.0°
C7	C6	C5	H1	179.7°	180.0°
N2	C4	C5	C6	179.9°	180.0°
N2	C4	C5	H1	0.1°	0.0°
C5	C4	N2	O3	14.5°	37.9°
C4	C5	C6	H1	180.0°	180.0°
C4	C5	C6	H2	179.8°	180.0°
C5	C6	C7	H3	179.8°	180.0°
H1	C5	C6	H2	0.2°	0.0°
H2	C6	C7	H3	0.2°	0.0°
H4	C10	C11	H5	0.1°	0.1°
H5	C11	C12	H6	0.7°	0.0°

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PDB entries from 2026-02-04

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