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SummaryGeometryRelated PDB entries

7YC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C10C08sing1.43Å1.15Å
C10N11trip1.14Å0.96Å
N12C09sing1.35Å1.36Å
N12C23sing1.47Å1.46Å
N12C19sing1.47Å1.45Å
C21C22sing1.53Å1.50Å
C21O20sing1.42Å1.45Å
C22C23sing1.53Å1.46Å
N14C03sing1.48Å1.36Å
C03C04doub1.38Å1.41ÅAromatic
C03C02sing1.39Å1.42ÅAromatic
C04C05sing1.40Å1.40ÅAromatic
C02O17sing1.36Å1.38Å
C02C01doub1.39Å1.41ÅAromatic
C01O18sing1.36Å1.37Å
C01C06sing1.38Å1.40ÅAromatic
C06C05doub1.40Å1.41ÅAromatic
C05C07sing1.46Å1.40Å
C07C08doub1.38Å1.56Å
C08C09sing1.47Å1.49Å
C09O13doub1.22Å1.21Å
O20C19sing1.43Å1.42Å
N14O16sing1.22Å1.64Å
N14O15doub1.22Å1.64Å
C21H1sing1.09Å1.10Å
C22H2sing1.09Å1.10Å
C04H3sing1.08Å1.08Å
O17H4sing0.97Å0.95Å
O18H5sing0.97Å0.95Å
C06H6sing1.08Å1.08Å
C07H7sing1.08Å1.08Å
C23H8sing1.09Å1.10Å
C19H9sing1.09Å1.10Å
C21H10sing1.09Å1.10Å
C22H11sing1.09Å1.10Å
C23H12sing1.09Å1.10Å
C19H13sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C08C10N11178.1°179.9°
C10C08C07124.9°119.9°
C10C08C09113.7°120.0°
C09N12C23128.4°120.9°
C09N12C19119.6°120.8°
N12C09C08120.0°120.0°
N12C09O13124.0°120.0°
C23N12C19111.8°118.2°
N12C23C22115.6°108.2°
N12C23H8107.9°109.7°
N12C23H12107.9°109.7°
N12C19O20116.5°108.7°
N12C19H9107.7°109.6°
N12C19H13107.7°109.6°
C22C21O20115.3°109.3°
C21C22C23119.3°108.9°
C22C21H1108.0°109.4°
C21C22H2107.0°109.6°
C22C21H10108.0°109.5°
C21C22H11107.0°109.6°
C21O20C19119.0°114.1°
O20C21H1108.0°109.7°
O20C21H10108.0°109.4°
C23C22H2107.0°109.8°
C22C23H8107.9°109.7°
C23C22H11107.0°109.3°
C22C23H12107.9°109.7°
N14C03C04121.4°119.9°
N14C03C02119.5°120.0°
C03N14O16117.3°120.1°
C03N14O15120.4°120.0°
C04C03C02119.2°120.2°
C03C04C05120.8°119.9°
C03C04H3119.6°120.0°
C03C02O17121.3°119.9°
C03C02C01120.1°120.3°
C04C05C06119.0°119.8°
C04C05C07118.2°120.1°
C05C04H3119.6°120.0°
O17C02C01118.6°119.9°
C02O17H4109.5°114.0°
C02C01O18118.4°120.0°
C02C01C06119.3°120.1°
O18C01C06122.3°119.9°
C01O18H5109.5°114.0°
C01C06C05121.6°119.8°
C01C06H6119.2°120.1°
C06C05C07122.7°120.1°
C05C06H6119.2°120.1°
C05C07C08123.8°120.0°
C05C07H7118.1°120.0°
C07C08C09121.2°120.0°
C08C07H7118.1°120.0°
C08C09O13116.0°120.0°
O20C19H9107.7°109.6°
O20C19H13107.7°109.6°
O16N14O15122.2°119.9°
H1C21H10109.5°109.5°
H2C22H11109.5°109.6°
H8C23H12109.5°109.8°
H9C19H13109.5°109.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C10C08C09N120.5°28.3°
C10C08C07C056.1°7.1°
C10C08C07C09175.9°180.0°
C10C08C09O13177.7°151.7°
C10C08C07H7173.9°172.9°
N11C10C08C072.8°165.0°
N11C10C08C09173.4°14.9°
C09N12C23C19174.4°179.7°
C09N12C23C22140.6°129.4°
N12C09C08C07176.9°151.7°
N12C09C08O13178.2°180.0°
C09N12C19O20134.3°129.1°
C09N12C23H898.5°110.9°
C09N12C19H913.3°9.4°
C09N12C23H1219.7°9.8°
C09N12C19H13104.7°111.2°
N12C23C22C2129.9°51.8°
N12C23C22H8120.9°119.7°
N12C23C22H12120.9°119.7°
C23N12C09C083.4°177.0°
C23N12C09O13178.5°3.0°
C23N12C19O2050.8°50.6°
N12C23C22H291.5°68.1°
N12C23H8H12117.2°120.6°
C23N12C19H9171.8°170.3°
N12C23C22H11151.3°171.6°
C23N12C19H1370.2°69.1°
N12C19O20C2140.3°55.8°
C19N12C23C2245.0°50.3°
C19N12C09C08177.4°3.3°
C19N12C09O134.5°176.7°
N12C19O20H9121.0°119.7°
N12C19O20H13121.0°119.8°
C19N12C23H875.8°69.4°
N12C19H9H13116.8°120.4°
C19N12C23H12165.9°170.0°
C22C21O20H1120.9°120.0°
C22C21O20H10120.8°119.9°
C21C22C23H2121.4°120.0°
C21C22C23H11121.4°119.7°
C22C21O20C1922.2°62.8°
C22C21H1H10117.4°120.0°
C21C22H2H11115.5°120.3°
C21C22C23H891.0°67.8°
C21C22C23H12150.8°171.5°
O20C21C22C2317.4°59.3°
O20C21H1H10117.4°120.1°
O20C21C22H2104.0°60.8°
C21O20C19H9161.3°175.5°
O20C21C22H11138.8°178.8°
C21O20C19H1380.7°64.0°
C23C22C21H1103.5°60.9°
C23C22H2H11115.6°120.1°
C22C23H8H12117.2°120.6°
C23C22C21H10138.2°179.1°
N14C03C04C02178.6°179.8°
N14C03C04C05178.2°180.0°
N14C03C02O171.1°0.1°
N14C03C02C01179.0°180.0°
C03N14O16O15175.9°180.0°
N14C03C04H31.9°0.0°
C03C04C05H3180.0°180.0°
C04C03C02O17179.8°179.7°
C04C03C02C010.4°0.2°
C03C04C05C061.8°0.0°
C03C04C05C07178.5°180.0°
C04C03N14O166.7°0.0°
C04C03N14O15169.2°180.0°
C02C03C04C050.4°0.3°
C03C02O17C01179.9°179.9°
C03C02C01O18179.5°180.0°
C03C02C01C060.2°0.0°
C02C03N14O16174.6°179.8°
C02C03N14O159.4°0.2°
C02C03C04H3179.5°179.8°
C03C02O17H46.6°90.0°
C04C05C06C012.4°0.2°
C04C05C06C07176.5°179.9°
C04C05C07C0863.8°149.7°
C04C05C06H6177.6°180.0°
C04C05C07H7116.2°30.3°
O17C02C01O180.4°0.1°
O17C02C01C06179.7°180.0°
C02C01O18C06179.3°179.9°
C02C01C06C051.6°0.3°
C01C02O17H4173.5°90.1°
C02C01O18H5180.0°89.9°
C02C01C06H6178.4°179.9°
O18C01C06C05179.1°179.8°
O18C01C06H60.9°0.0°
C01C06C05H6180.0°179.8°
C01C06C05C07178.9°179.7°
C06C01O18H50.7°90.0°
C06C05C07C08119.7°30.3°
C06C05C04H3178.2°180.0°
C06C05C07H760.3°149.7°
C05C07C08H7180.0°180.0°
C05C07C08C09178.0°172.9°
C07C05C04H31.5°0.0°
C07C05C06H61.1°0.1°
C07C08C09O131.4°28.3°
C09C08C07H72.0°7.0°
C19O20C21H198.7°57.2°
O20C19H9H13116.8°120.4°
C19O20C21H10143.0°177.4°
H1C21C22H2135.1°179.0°
H1C21C22H1118.0°58.7°
H2C22C23H8147.6°172.2°
H2C22C21H1016.8°59.0°
H2C22C23H1229.4°51.6°
H8C23C22H1130.4°51.9°
H10C21C22H11100.4°61.3°
H11C22C23H1287.8°68.7°

219869

PDB entries from 2024-05-15

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