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SummaryGeometryRelated PDB entries

7TO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
NBCCAWdoub1.31Å1.34ÅAromatic
NBCCAVsing1.34Å1.33ÅAromatic
CAWNBQsing1.35Å1.32ÅAromatic
CAVCBLdoub1.35Å1.34ÅAromatic
NACCAKtrip1.14Å1.13Å
CAKCBFsing1.43Å1.42Å
NBQCBLsing1.37Å1.33ÅAromatic
NBQCABsing1.46Å1.50Å
CALCBFdoub1.40Å1.39ÅAromatic
CALCAUsing1.37Å1.38ÅAromatic
CBLCBAsing1.51Å1.54Å
CBFCAXsing1.40Å1.38ÅAromatic
CAUCBMdoub1.40Å1.40ÅAromatic
CAXCBJdoub1.38Å1.39ÅAromatic
CBMNBOsing1.40Å1.34Å
CBMCBJsing1.39Å1.39ÅAromatic
CBANBOsing1.47Å1.49Å
NBOCBBsing1.46Å1.48Å
CBJCAZsing1.50Å1.52Å
CAAOBDsing1.43Å1.44Å
CBBCBNsing1.55Å1.55Å
OBDCBHsing1.36Å1.36Å
OADSBSdoub1.42Å1.50Å
CAOCAMdoub1.38Å1.40ÅAromatic
CAOCBIsing1.39Å1.40ÅAromatic
CAZNBPsing1.47Å1.48Å
CAMCBGsing1.38Å1.40ÅAromatic
CBHCARdoub1.39Å1.39ÅAromatic
CBHCAQsing1.39Å1.40ÅAromatic
OBESBSsing1.52Å1.51Å
OBECBIsing1.36Å1.40Å
CARCATsing1.38Å1.39ÅAromatic
OAESBSdoub1.42Å1.50Å
SBSCBRsing1.81Å1.83Å
CBICAPdoub1.39Å1.41ÅAromatic
CAQCASdoub1.38Å1.40ÅAromatic
CATCBKdoub1.38Å1.39ÅAromatic
CBNNBPsing1.45Å1.49Å
CBNCAYsing1.53Å1.56Å
NBPSBTsing1.66Å1.71Å
CBGCAYsing1.51Å1.55Å
CBGCANdoub1.38Å1.40ÅAromatic
CASCBKsing1.38Å1.40ÅAromatic
CBKSBTsing1.76Å1.77Å
CAPCANsing1.38Å1.41ÅAromatic
SBTOAGdoub1.42Å1.50Å
SBTOAFdoub1.42Å1.50Å
CBRFAHsing1.40Å1.33Å
CBRFAJsing1.40Å1.33Å
CBRFAIsing1.40Å1.34Å
CAAH1sing1.09Å1.10Å
CAAH2sing1.09Å1.10Å
CAAH3sing1.09Å1.10Å
CARH4sing1.08Å1.08Å
CATH5sing1.08Å1.08Å
CAQH6sing1.08Å1.08Å
CASH7sing1.08Å1.08Å
CAZH8sing1.09Å1.10Å
CAZH9sing1.09Å1.10Å
CAXH10sing1.08Å1.08Å
CALH11sing1.08Å1.08Å
CAUH12sing1.08Å1.08Å
CBAH13sing1.09Å1.10Å
CBAH14sing1.09Å1.10Å
CAVH15sing1.08Å1.08Å
CAWH16sing1.08Å1.08Å
CABH17sing1.09Å1.10Å
CABH18sing1.09Å1.10Å
CABH19sing1.09Å1.10Å
CBBH20sing1.09Å1.10Å
CBBH21sing1.09Å1.10Å
CBNH22sing1.09Å1.10Å
CAYH23sing1.09Å1.10Å
CAYH24sing1.09Å1.10Å
CANH25sing1.08Å1.08Å
CAPH26sing1.08Å1.08Å
CAMH27sing1.08Å1.08Å
CAOH28sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAWNBCCAV108.2°109.3°
NBCCAWNBQ107.0°108.7°
NBCCAWH16126.5°125.7°
NBCCAVCBL108.3°108.0°
NBCCAVH15125.9°126.0°
CAWNBQCBL109.6°107.2°
CAWNBQCAB125.0°126.3°
NBQCAWH16126.5°125.7°
CAVCBLNBQ106.9°106.9°
CAVCBLCBA127.4°126.6°
CBLCAVH15125.9°126.0°
NACCAKCBF178.4°179.9°
CAKCBFCAL117.9°120.4°
CAKCBFCAX121.4°120.4°
CBLNBQCAB125.3°126.5°
NBQCBLCBA125.8°126.6°
NBQCABH17109.5°109.5°
NBQCABH18109.5°109.4°
NBQCABH19109.4°109.5°
CBFCALCAU120.8°119.9°
CALCBFCAX120.7°119.2°
CBFCALH11119.6°120.1°
CALCAUCBM119.3°121.1°
CAUCALH11119.6°120.0°
CALCAUH12120.3°119.4°
CBLCBANBO110.1°109.5°
CBLCBAH13109.3°109.4°
CBLCBAH14109.3°109.4°
CBFCAXCBJ118.7°120.5°
CBFCAXH10120.6°119.7°
CAUCBMNBO115.0°115.2°
CAUCBMCBJ119.3°118.6°
CBMCAUH12120.3°119.5°
CAXCBJCBM121.2°120.6°
CAXCBJCAZ112.0°118.5°
CBJCAXH10120.6°119.8°
NBOCBMCBJ125.7°126.1°
CBMNBOCBA120.8°111.0°
CBMNBOCBB122.1°115.2°
CBMCBJCAZ126.8°120.9°
CBANBOCBB117.0°111.0°
NBOCBAH13109.3°109.5°
NBOCBAH14109.3°109.5°
NBOCBBCBN113.2°109.0°
NBOCBBH20108.5°109.6°
NBOCBBH21108.5°109.6°
CBJCAZNBP114.5°110.1°
CBJCAZH8108.2°109.4°
CBJCAZH9108.2°109.3°
CAAOBDCBH111.2°117.0°
OBDCAAH1109.5°109.5°
OBDCAAH2109.5°109.5°
OBDCAAH3109.4°109.5°
CBBCBNNBP116.7°107.6°
CBBCBNCAY112.3°109.8°
CBNCBBH20108.5°109.5°
CBNCBBH21108.5°109.4°
CBBCBNH22105.3°109.8°
OBDCBHCAR120.1°120.1°
OBDCBHCAQ120.2°120.0°
OADSBSOBE110.1°104.2°
OADSBSOAE107.2°121.1°
OADSBSCBR105.5°110.5°
CAMCAOCBI121.7°119.9°
CAOCAMCBG121.3°120.1°
CAOCAMH27119.4°120.0°
CAMCAOH28119.2°120.0°
CAOCBIOBE121.2°120.0°
CAOCBICAP116.9°119.9°
CBICAOH28119.2°120.0°
CAZNBPCBN116.5°117.0°
CAZNBPSBT116.2°121.5°
NBPCAZH8108.2°109.4°
NBPCAZH9108.2°109.4°
CAMCBGCAY119.3°119.9°
CAMCBGCAN117.9°120.1°
CBGCAMH27119.4°120.0°
CARCBHCAQ119.7°119.9°
CBHCARCAT119.8°119.9°
CBHCARH4120.1°120.1°
CBHCAQCAS120.4°119.9°
CBHCAQH6119.8°120.0°
SBSOBECBI121.8°114.0°
OBESBSOAE114.6°104.3°
OBESBSCBR109.9°104.5°
OBECBICAP121.9°120.1°
CARCATCBK120.9°120.1°
CATCARH4120.1°120.1°
CARCATH5119.6°119.9°
OAESBSCBR109.1°110.5°
SBSCBRFAH109.1°109.5°
SBSCBRFAJ108.4°109.5°
SBSCBRFAI109.7°109.5°
CBICAPCAN121.7°119.9°
CBICAPH26119.1°120.0°
CAQCASCBK119.5°120.1°
CASCAQH6119.8°120.0°
CAQCASH7120.2°120.0°
CATCBKCAS119.6°120.1°
CATCBKSBT117.5°120.0°
CBKCATH5119.6°120.0°
NBPCBNCAY110.3°110.1°
CBNNBPSBT113.3°121.5°
NBPCBNH22106.0°109.7°
CBNCAYCBG120.8°109.5°
CAYCBNH22105.2°109.8°
CBNCAYH23106.5°109.5°
CBNCAYH24106.6°109.4°
NBPSBTCBK117.4°107.2°
NBPSBTOAG106.5°106.4°
NBPSBTOAF106.7°106.4°
CAYCBGCAN122.7°120.0°
CBGCAYH23106.6°109.5°
CBGCAYH24106.6°109.5°
CBGCANCAP120.6°120.1°
CBGCANH25119.7°120.0°
CASCBKSBT122.8°119.9°
CBKCASH7120.2°120.0°
CBKSBTOAG107.0°106.4°
CBKSBTOAF110.2°106.4°
CAPCANH25119.7°119.9°
CANCAPH26119.2°120.0°
OAGSBTOAF108.7°123.1°
FAHCBRFAJ108.6°109.4°
FAHCBRFAI109.2°109.4°
FAJCBRFAI111.8°109.5°
H1CAAH2109.4°109.4°
H1CAAH3109.5°109.5°
H2CAAH3109.5°109.4°
H8CAZH9109.4°109.3°
H13CBAH14109.5°109.5°
H17CABH18109.5°109.5°
H17CABH19109.5°109.4°
H18CABH19109.5°109.5°
H20CBBH21109.5°109.7°
H23CAYH24109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
NBCCAWNBQH16180.0°179.7°
CAWNBCCAVCBL0.1°0.1°
NBCCAWNBQCBL0.2°0.4°
NBCCAWNBQCAB179.9°179.9°
CAWNBCCAVH15179.8°180.0°
CAVNBCCAWNBQ0.0°0.3°
NBCCAVCBLH15180.0°180.0°
NBCCAVCBLNBQ0.3°0.2°
NBCCAVCBLCBA179.3°180.0°
CAVNBCCAWH16180.0°180.0°
CAWNBQCBLCAV0.3°0.3°
CAWNBQCBLCAB179.9°179.7°
CAWNBQCBLCBA179.3°179.9°
CAWNBQCABH17180.0°83.8°
CAWNBQCABH1860.0°156.3°
CAWNBQCABH1960.0°36.2°
CAVCBLNBQCBA179.6°179.8°
CAVCBLNBQCAB179.9°180.0°
CAVCBLCBANBO16.7°92.6°
CAVCBLCBAH13103.3°27.4°
CAVCBLCBAH14136.9°147.4°
NACCAKCBFCAL10.3°114.7°
NACCAKCBFCAX170.9°65.3°
CAKCBFCALCAX178.9°180.0°
CAKCBFCALCAU179.2°178.7°
CAKCBFCAXCBJ179.8°179.9°
CAKCBFCAXH100.2°0.0°
CAKCBFCALH110.8°1.3°
NBQCBLCBANBO163.8°87.6°
NBQCBLCBAH1376.1°152.3°
NBQCBLCBAH1443.7°32.4°
NBQCBLCAVH15179.7°179.8°
CBLNBQCAWH16179.8°179.9°
CBLNBQCABH170.2°96.6°
CBLNBQCABH18119.8°23.3°
CBLNBQCABH19120.2°143.4°
CABNBQCBLCBA0.6°0.2°
CABNBQCAWH160.0°0.2°
NBQCABH17H18120.0°120.0°
NBQCABH17H19120.0°120.1°
NBQCABH18H19120.0°120.1°
CBFCALCAUH11180.0°180.0°
CBFCALCAUCBM0.4°0.6°
CALCBFCAXCBJ1.0°0.0°
CALCBFCAXH10179.0°180.0°
CBFCALCAUH12179.6°179.3°
CAUCALCBFCAX0.3°1.3°
CALCAUCBMH12180.0°179.9°
CALCAUCBMNBO178.3°176.4°
CALCAUCBMCBJ0.5°1.2°
CBLCBANBOCBM93.1°177.5°
CBLCBANBOH13120.1°120.0°
CBLCBANBOH14120.1°120.0°
CBLCBANBOCBB83.5°53.1°
CBLCBAH13H14119.7°119.9°
CBACBLCAVH150.7°0.0°
CBFCAXCBJH10180.0°179.9°
CBFCAXCBJCBM0.9°1.8°
CBFCAXCBJCAZ178.6°177.3°
CAXCBFCALH11179.7°178.7°
CAUCBMCBJCAX0.2°2.4°
CAUCBMNBOCBJ178.7°177.4°
CAUCBMNBOCBA21.3°23.7°
CAUCBMNBOCBB155.2°150.9°
CAUCBMCBJCAZ179.2°176.7°
CBMCAUCALH11179.6°179.4°
CAXCBJCBMNBO178.8°174.9°
CAXCBJCBMCAZ179.4°179.2°
CAXCBJCAZNBP139.2°132.7°
CAXCBJCAZH8100.1°12.6°
CAXCBJCAZH918.4°107.1°
CBMNBOCBACBB176.7°129.4°
NBOCBMCBJCAZ0.6°6.0°
CBMNBOCBBCBN74.2°88.7°
NBOCBMCAUH121.7°3.5°
CBMNBOCBAH1326.9°57.5°
CBMNBOCBAH14146.8°62.6°
CBMNBOCBBH20165.2°151.5°
CBMNBOCBBH2146.3°31.0°
CBJCBMNBOCBA160.0°158.9°
CBJCBMNBOCBB23.5°31.7°
CBMCBJCAZNBP41.4°48.1°
CBMCBJCAZH879.4°168.3°
CBMCBJCAZH9162.1°72.1°
CBMCBJCAXH10179.1°178.1°
CBJCBMCAUH12179.6°178.9°
CBANBOCBBCBN109.1°144.1°
NBOCBAH13H14119.7°120.1°
CBANBOCBBH2011.4°24.3°
CBANBOCBBH21130.3°96.2°
NBOCBBCBNH20120.5°119.9°
NBOCBBCBNH21120.5°119.8°
NBOCBBCBNNBP53.2°60.2°
NBOCBBCBNCAY178.0°179.9°
CBBNBOCBAH13156.4°173.1°
CBBNBOCBAH1436.6°66.9°
NBOCBBH20H21118.3°120.4°
NBOCBBCBNH2264.0°59.1°
CBJCAZNBPH8120.7°120.2°
CBJCAZNBPH9120.8°120.1°
CBJCAZNBPCBN73.0°89.4°
CBJCAZNBPSBT64.5°90.9°
CBJCAZH8H9117.7°119.6°
CAZCBJCAXH101.4°2.7°
CAAOBDCBHCAR8.1°180.0°
CAAOBDCBHCAQ172.1°0.3°
OBDCAAH1H2120.0°120.0°
OBDCAAH1H3120.0°120.0°
OBDCAAH2H3120.0°120.0°
CBBCBNNBPCAZ24.9°32.0°
CBBCBNNBPCAY129.7°119.7°
CBBCBNNBPH22116.8°119.4°
CBBCBNCAYH22114.0°120.8°
CBBCBNNBPSBT113.8°148.2°
CBBCBNCAYCBG80.7°175.0°
CBNCBBH20H21118.3°120.1°
CBBCBNCAYH23157.7°54.9°
CBBCBNCAYH2440.9°65.0°
OBDCBHCARCAQ179.8°179.7°
OBDCBHCARCAT179.8°180.0°
OBDCBHCAQCAS179.8°180.0°
CBHOBDCAAH1180.0°60.0°
CBHOBDCAAH260.0°60.0°
CBHOBDCAAH360.0°180.0°
OBDCBHCARH40.2°0.0°
OBDCBHCAQH60.2°0.1°
OADSBSOBEOAE120.9°127.9°
OADSBSOBECBR115.8°116.1°
OADSBSOBECBI157.9°169.0°
OADSBSOAECBR113.8°131.5°
OADSBSCBRFAH50.9°51.6°
OADSBSCBRFAJ67.2°171.6°
OADSBSCBRFAI170.5°68.4°
CAMCAOCBIH28180.0°179.8°
CAOCAMCBGH27180.0°180.0°
CAMCAOCBIOBE179.4°180.0°
CAMCAOCBICAP1.3°0.4°
CAOCAMCBGCAY178.4°180.0°
CAOCAMCBGCAN1.9°0.2°
CBICAOCAMCBG1.7°0.1°
CAOCBIOBESBS72.7°90.0°
CAOCBIOBECAP178.0°179.6°
CAOCBICAPCAN1.3°0.3°
CAOCBICAPH26178.7°179.7°
CBICAOCAMH27178.3°179.9°
CAZNBPCBNSBT138.8°179.7°
CAZNBPCBNCAY104.8°87.6°
CAZNBPSBTCBK61.3°90.0°
CAZNBPSBTOAG58.6°156.5°
CAZNBPSBTOAF174.5°23.6°
NBPCAZH8H9117.7°119.8°
CAZNBPCBNH22141.8°151.4°
CAMCBGCAYCBN94.4°90.2°
CAMCBGCAYCAN176.3°179.8°
CAMCBGCANCAP1.8°0.2°
CAMCBGCAYH23144.0°149.7°
CAMCBGCAYH2427.1°29.7°
CAMCBGCANH25178.1°179.7°
CBGCAMCAOH28178.3°180.0°
CBHCARCATH4180.0°179.9°
CARCBHCAQCAS0.0°0.3°
CBHCARCATCBK0.8°0.0°
CBHCARCATH5179.2°179.9°
CARCBHCAQH6179.9°179.7°
CAQCBHCARCAT0.0°0.3°
CBHCAQCASH6180.0°179.9°
CBHCAQCASCBK0.8°0.0°
CAQCBHCARH4180.0°179.8°
CBHCAQCASH7179.2°180.0°
OBESBSOAECBR123.7°111.8°
SBSOBECBICAP109.3°90.3°
OBESBSCBRFAH67.8°60.0°
OBESBSCBRFAJ174.1°60.0°
OBESBSCBRFAI51.8°180.0°
CBIOBESBSOAE37.0°41.1°
CBIOBESBSCBR86.3°75.0°
OBECBICAPCAN179.4°180.0°
OBECBICAPH260.6°0.1°
OBECBICAOH280.5°0.2°
CARCATCBKH5180.0°180.0°
CARCATCBKCAS1.6°0.3°
CARCATCBKSBT179.7°180.0°
OAESBSCBRFAH165.8°171.6°
OAESBSCBRFAJ47.7°51.7°
OAESBSCBRFAI74.6°68.4°
SBSCBRFAHFAJ118.0°120.0°
SBSCBRFAHFAI119.9°120.0°
SBSCBRFAJFAI121.0°120.1°
CBICAPCANCBG1.6°0.0°
CBICAPCANH26180.0°180.0°
CBICAPCANH25178.4°180.0°
CAPCBICAOH28178.7°179.8°
CAQCASCBKCAT1.6°0.3°
CAQCASCBKH7180.0°180.0°
CAQCASCBKSBT179.8°179.9°
CATCBKSBTNBP93.3°90.0°
CATCBKCASSBT178.6°179.8°
CATCBKSBTOAG26.2°23.5°
CATCBKSBTOAF144.3°156.5°
CBKCATCARH4179.2°180.0°
CATCBKCASH7178.4°179.7°
NBPCBNCAYH22113.9°120.9°
NBPCBNCAYCBG51.4°66.7°
CBNNBPSBTCBK77.7°90.3°
CBNNBPSBTOAG162.5°23.3°
CBNNBPSBTOAF46.6°156.1°
CBNNBPCAZH847.7°150.5°
CBNNBPCAZH9166.2°30.7°
NBPCBNCBBH20173.7°179.9°
NBPCBNCBBH2167.3°59.6°
NBPCBNCAYH2370.2°173.2°
NBPCBNCAYH24173.0°53.3°
CAYCBNNBPSBT116.4°92.1°
CBNCAYCBGH23121.6°120.0°
CBNCAYCBGH24121.6°120.0°
CBNCAYCBGCAN89.3°90.0°
CAYCBNCBBH2057.4°60.0°
CAYCBNCBBH2161.5°60.2°
CBNCAYH23H24114.9°119.9°
NBPSBTCBKCAS88.0°89.8°
NBPSBTCBKOAG119.6°113.5°
NBPSBTCBKOAF122.4°113.5°
NBPSBTOAGOAF114.6°122.9°
SBTNBPCAZH8174.7°29.3°
SBTNBPCAZH956.2°149.0°
SBTNBPCBNH223.0°28.8°
CAYCBGCANCAP178.2°180.0°
CBGCAYCBNH22165.3°54.1°
CBGCAYH23H24114.9°120.0°
CAYCBGCANH251.8°0.1°
CAYCBGCAMH271.6°0.0°
CBGCANCAPH25180.0°179.9°
CANCBGCAYH2332.3°30.1°
CANCBGCAYH24149.2°150.0°
CBGCANCAPH26178.4°180.0°
CANCBGCAMH27178.1°179.8°
CASCBKSBTOAG152.4°156.7°
CASCBKSBTOAF34.4°23.8°
CASCBKCATH5178.4°179.8°
CBKCASCAQH6179.1°180.0°
CBKSBTOAGOAF119.0°123.0°
SBTCBKCATH50.3°0.0°
SBTCBKCASH70.2°0.0°
FAHCBRFAJFAI120.6°120.0°
H1CAAH2H3120.0°120.0°
H4CARCATH50.8°0.0°
H6CAQCASH70.9°0.0°
H11CALCAUH120.4°0.7°
H17CABH18H19120.0°119.9°
H20CBBCBNH2256.6°60.8°
H21CBBCBNH22175.5°178.9°
H22CBNCAYH2343.7°65.9°
H22CBNCAYH2473.1°174.1°
H25CANCAPH261.6°0.1°
H27CAMCAOH281.7°0.1°

246704

PDB entries from 2025-12-24

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