7TK
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CG | OD1 | doub | 1.21Å | 1.23Å | |
CG | CB | sing | 1.51Å | 1.52Å | |
CB | CA | sing | 1.53Å | 1.54Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | N | sing | 1.47Å | 1.46Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | N5 | sing | 1.35Å | 1.35Å | |
C1 | N5 | sing | 1.47Å | 1.47Å | |
C1 | C2 | sing | 1.55Å | 1.51Å | |
N5 | C4 | sing | 1.47Å | 1.48Å | |
C2 | C3 | sing | 1.55Å | 1.49Å | |
C4 | C3 | sing | 1.54Å | 1.52Å | |
CG | O1 | sing | 1.34Å | 1.36Å | |
N | H1 | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | H4 | sing | 1.09Å | 1.10Å | |
CB | H5 | sing | 1.09Å | 1.10Å | |
CB | H6 | sing | 1.09Å | 1.10Å | |
C4 | H7 | sing | 1.09Å | 1.10Å | |
C4 | H8 | sing | 1.09Å | 1.10Å | |
C3 | H9 | sing | 1.09Å | 1.10Å | |
C3 | H10 | sing | 1.09Å | 1.10Å | |
C2 | H11 | sing | 1.09Å | 1.10Å | |
C2 | H12 | sing | 1.09Å | 1.10Å | |
C1 | H13 | sing | 1.09Å | 1.10Å | |
C1 | H14 | sing | 1.09Å | 1.10Å | |
O1 | H15 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
OD1 | CG | CB | 120.5° | 120.0° |
OD1 | CG | O1 | 120.7° | 120.0° |
CG | CB | CA | 115.8° | 109.4° |
CB | CG | O1 | 118.7° | 120.0° |
CG | CB | H5 | 107.9° | 109.5° |
CG | CB | H6 | 107.9° | 109.4° |
CB | CA | C | 110.8° | 109.4° |
CB | CA | N | 107.6° | 109.5° |
CB | CA | H4 | 109.6° | 109.5° |
CA | CB | H5 | 107.9° | 109.5° |
CA | CB | H6 | 107.9° | 109.5° |
C | CA | N | 108.4° | 109.5° |
CA | C | O | 121.0° | 120.0° |
CA | C | N5 | 118.6° | 120.0° |
C | CA | H4 | 109.7° | 109.4° |
CA | N | H1 | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 110.9° |
N | CA | H4 | 110.8° | 109.5° |
O | C | N5 | 120.4° | 120.0° |
C | N5 | C1 | 128.2° | 125.6° |
C | N5 | C4 | 121.9° | 125.7° |
N5 | C1 | C2 | 102.3° | 104.7° |
C1 | N5 | C4 | 109.9° | 108.7° |
N5 | C1 | H13 | 111.2° | 110.3° |
N5 | C1 | H14 | 111.2° | 110.4° |
C1 | C2 | C3 | 102.3° | 101.5° |
C1 | C2 | H11 | 111.2° | 111.2° |
C1 | C2 | H12 | 111.2° | 111.0° |
C2 | C1 | H13 | 111.3° | 110.5° |
C2 | C1 | H14 | 111.2° | 110.4° |
N5 | C4 | C3 | 103.8° | 107.3° |
N5 | C4 | H7 | 110.8° | 109.8° |
N5 | C4 | H8 | 110.8° | 109.9° |
C2 | C3 | C4 | 103.8° | 103.0° |
C2 | C3 | H9 | 110.9° | 110.7° |
C2 | C3 | H10 | 110.9° | 110.8° |
C3 | C2 | H11 | 111.2° | 111.0° |
C3 | C2 | H12 | 111.2° | 111.0° |
C3 | C4 | H7 | 110.9° | 109.9° |
C3 | C4 | H8 | 110.9° | 109.9° |
C4 | C3 | H9 | 110.9° | 110.7° |
C4 | C3 | H10 | 110.9° | 110.7° |
CG | O1 | H15 | 109.5° | 117.0° |
H1 | N | H2 | 109.5° | 111.0° |
H5 | CB | H6 | 109.4° | 109.5° |
H7 | C4 | H8 | 109.5° | 110.0° |
H9 | C3 | H10 | 109.5° | 110.6° |
H11 | C2 | H12 | 109.5° | 110.9° |
H13 | C1 | H14 | 109.5° | 110.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OD1 | CG | CB | O1 | 177.1° | 180.0° |
OD1 | CG | CB | CA | 99.7° | 0.0° |
OD1 | CG | CB | H5 | 139.4° | 120.0° |
OD1 | CG | CB | H6 | 21.3° | 119.9° |
OD1 | CG | O1 | H15 | 0.0° | 0.0° |
CG | CB | CA | H5 | 120.9° | 120.0° |
CG | CB | CA | H6 | 120.9° | 119.9° |
CG | CB | CA | C | 176.2° | 175.0° |
CG | CB | CA | N | 57.9° | 65.0° |
CG | CB | CA | H4 | 62.6° | 55.0° |
CG | CB | H5 | H6 | 117.1° | 120.0° |
CB | CG | O1 | H15 | 177.1° | 180.0° |
CB | CA | C | N | 117.8° | 120.0° |
CB | CA | C | H4 | 121.2° | 120.0° |
CB | CA | N | H4 | 119.8° | 120.0° |
CB | CA | C | O | 7.9° | 100.0° |
CB | CA | C | N5 | 173.8° | 80.0° |
CA | CB | CG | O1 | 83.2° | 180.0° |
CB | CA | N | H1 | 180.0° | 59.9° |
CB | CA | N | H2 | 60.0° | 64.0° |
CA | CB | H5 | H6 | 117.1° | 120.1° |
C | CA | N | H4 | 120.4° | 120.0° |
CA | C | O | N5 | 178.3° | 180.0° |
CA | C | N5 | C1 | 11.3° | 0.3° |
CA | C | N5 | C4 | 167.8° | 180.0° |
C | CA | N | H1 | 60.2° | 60.1° |
C | CA | N | H2 | 59.8° | 176.1° |
C | CA | CB | H5 | 62.9° | 65.0° |
C | CA | CB | H6 | 55.3° | 55.0° |
N | CA | C | O | 109.9° | 20.0° |
N | CA | C | N5 | 68.4° | 160.0° |
CA | N | H1 | H2 | 120.0° | 123.9° |
N | CA | CB | H5 | 178.9° | 54.9° |
N | CA | CB | H6 | 63.0° | 175.0° |
O | C | N5 | C1 | 170.4° | 179.7° |
O | C | N5 | C4 | 10.5° | 0.0° |
O | C | CA | H4 | 129.1° | 140.0° |
C | N5 | C1 | C4 | 179.1° | 179.7° |
C | N5 | C1 | C2 | 155.6° | 155.8° |
C | N5 | C4 | C3 | 179.2° | 179.0° |
N5 | C | CA | H4 | 52.6° | 40.0° |
C | N5 | C4 | H7 | 60.1° | 59.6° |
C | N5 | C4 | H8 | 61.7° | 61.6° |
C | N5 | C1 | H13 | 36.8° | 85.3° |
C | N5 | C1 | H14 | 85.5° | 37.0° |
N5 | C1 | C2 | H13 | 118.8° | 118.8° |
N5 | C1 | C2 | H14 | 118.8° | 118.8° |
N5 | C1 | C2 | C3 | 39.5° | 37.2° |
C1 | N5 | C4 | C3 | 1.6° | 1.3° |
C1 | N5 | C4 | H7 | 120.7° | 120.7° |
C1 | N5 | C4 | H8 | 117.5° | 118.1° |
N5 | C1 | C2 | H11 | 79.4° | 80.8° |
N5 | C1 | C2 | H12 | 158.3° | 155.3° |
N5 | C1 | H13 | H14 | 123.3° | 122.3° |
C2 | C1 | N5 | C4 | 23.5° | 24.4° |
C1 | C2 | C3 | H11 | 118.8° | 118.2° |
C1 | C2 | C3 | H12 | 118.8° | 118.0° |
C1 | C2 | C3 | C4 | 41.2° | 35.6° |
C1 | C2 | C3 | H9 | 160.3° | 154.0° |
C1 | C2 | C3 | H10 | 77.9° | 82.8° |
C1 | C2 | H11 | H12 | 123.3° | 123.9° |
C2 | C1 | H13 | H14 | 123.4° | 122.4° |
N5 | C4 | C3 | C2 | 26.6° | 22.1° |
N5 | C4 | C3 | H7 | 119.1° | 119.4° |
N5 | C4 | C3 | H8 | 119.1° | 119.4° |
N5 | C4 | H7 | H8 | 122.6° | 121.1° |
N5 | C4 | C3 | H9 | 145.7° | 140.6° |
N5 | C4 | C3 | H10 | 92.5° | 96.4° |
C4 | N5 | C1 | H13 | 142.4° | 94.4° |
C4 | N5 | C1 | H14 | 95.3° | 143.2° |
C2 | C3 | C4 | H9 | 119.1° | 118.4° |
C2 | C3 | C4 | H10 | 119.1° | 118.5° |
C2 | C3 | C4 | H7 | 145.7° | 97.2° |
C2 | C3 | C4 | H8 | 92.5° | 141.6° |
C2 | C3 | H9 | H10 | 122.6° | 123.3° |
C3 | C2 | H11 | H12 | 123.3° | 123.9° |
C3 | C2 | C1 | H13 | 158.3° | 81.5° |
C3 | C2 | C1 | H14 | 79.4° | 156.1° |
C3 | C4 | H7 | H8 | 122.6° | 121.1° |
C4 | C3 | H9 | H10 | 122.6° | 123.1° |
C4 | C3 | C2 | H11 | 77.7° | 82.6° |
C4 | C3 | C2 | H12 | 160.0° | 153.6° |
O1 | CG | CB | H5 | 37.7° | 60.0° |
O1 | CG | CB | H6 | 155.9° | 60.0° |
H1 | N | CA | H4 | 60.2° | 179.9° |
H2 | N | CA | H4 | 179.8° | 56.1° |
H4 | CA | CB | H5 | 58.4° | 175.0° |
H4 | CA | CB | H6 | 176.5° | 64.9° |
H7 | C4 | C3 | H9 | 95.2° | 21.2° |
H7 | C4 | C3 | H10 | 26.6° | 144.3° |
H8 | C4 | C3 | H9 | 26.6° | 100.0° |
H8 | C4 | C3 | H10 | 148.4° | 23.1° |
H9 | C3 | C2 | H11 | 41.4° | 35.8° |
H9 | C3 | C2 | H12 | 80.9° | 88.0° |
H10 | C3 | C2 | H11 | 163.2° | 159.0° |
H10 | C3 | C2 | H12 | 40.9° | 35.2° |
H11 | C2 | C1 | H13 | 39.5° | 160.4° |
H11 | C2 | C1 | H14 | 161.8° | 38.0° |
H12 | C2 | C1 | H13 | 82.9° | 36.5° |
H12 | C2 | C1 | H14 | 39.5° | 85.9° |