7MN
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C | CA | sing | 1.40Å | 1.54Å | |
N | C4A | sing | 1.32Å | 1.37Å | |
O | C | doub | 1.22Å | 1.24Å | |
P | O1P | sing | 1.61Å | 1.50Å | |
N1 | C6 | sing | 1.36Å | 1.35Å | |
C2 | N1 | sing | 1.36Å | 1.37Å | |
C3 | C2 | doub | 1.36Å | 1.42Å | |
C3 | C4 | sing | 1.42Å | 1.49Å | |
O3 | C3 | sing | 1.36Å | 1.27Å | |
C4 | C5 | sing | 1.41Å | 1.44Å | |
C5 | C6 | doub | 1.35Å | 1.38Å | |
C5 | C5A | sing | 1.51Å | 1.52Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
CA | N | doub | 1.33Å | 1.31Å | |
CA | CB | sing | 1.51Å | 1.51Å | |
CB | HB | sing | 1.09Å | 1.10Å | |
CB | HBA | sing | 1.09Å | 1.10Å | |
CG | CD2 | sing | 1.52Å | 1.50Å | |
CG | HG | sing | 1.09Å | 1.10Å | |
O1P | HO1P | sing | 0.97Å | 0.95Å | |
C2A | C2 | sing | 1.51Å | 1.50Å | |
C2A | H2A | sing | 1.09Å | 1.10Å | |
C2A | H2AA | sing | 1.09Å | 1.10Å | |
O2P | P | doub | 1.48Å | 1.50Å | |
O3P | P | sing | 1.61Å | 1.50Å | |
O3P | HO3P | sing | 0.97Å | 0.95Å | |
C4A | C4 | doub | 1.41Å | 1.40Å | |
C4A | H4A | sing | 1.08Å | 1.08Å | |
O4P | P | sing | 1.61Å | 1.41Å | |
O4P | C5A | sing | 1.43Å | 1.45Å | |
C5A | H5A | sing | 1.09Å | 1.10Å | |
C5A | H5AA | sing | 1.09Å | 1.10Å | |
CD1 | CG | sing | 1.55Å | 1.55Å | |
CD1 | NE1 | sing | 1.48Å | 1.51Å | |
CD1 | HD1 | sing | 1.09Å | 1.10Å | |
CD2 | CE2 | doub | 1.39Å | 1.40Å | Aromatic |
CD2 | CE3 | sing | 1.38Å | 1.38Å | Aromatic |
NE1 | CB | sing | 1.47Å | 1.50Å | |
NE1 | CE2 | sing | 1.40Å | 1.40Å | |
CE2 | CZ2 | sing | 1.39Å | 1.41Å | Aromatic |
CE3 | CZ3 | doub | 1.38Å | 1.42Å | Aromatic |
CE3 | HE3 | sing | 1.08Å | 1.08Å | |
CH2 | HH2 | sing | 1.08Å | 1.08Å | |
OXT | C | sing | 1.35Å | 1.23Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CZ2 | CH2 | doub | 1.38Å | 1.41Å | Aromatic |
CZ2 | HZ2 | sing | 1.08Å | 1.08Å | |
CZ3 | CH2 | sing | 1.38Å | 1.41Å | Aromatic |
CZ3 | HZ3 | sing | 1.08Å | 1.08Å | |
N | H | sing | 0.97Å | 1.00Å | |
N1 | H19 | sing | 0.97Å | 1.00Å | |
O3 | H20 | sing | 0.97Å | 0.95Å | |
CG | H21 | sing | 1.09Å | 1.10Å | |
C2A | H22 | sing | 1.09Å | 1.10Å | |
CD1 | H23 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | C | O | 114.5° | 120.0° |
C | CA | N | 113.5° | 120.0° |
C | CA | CB | 122.3° | 120.0° |
CA | C | OXT | 115.3° | 120.0° |
C4A | N | CA | 132.9° | 120.0° |
N | C4A | C4 | 122.8° | 120.0° |
N | C4A | H4A | 118.6° | 119.9° |
C4A | N | H | 113.6° | 120.0° |
O | C | OXT | 130.2° | 120.0° |
P | O1P | HO1P | 109.5° | 114.0° |
O1P | P | O2P | 112.5° | 109.5° |
O1P | P | O3P | 113.6° | 109.5° |
O1P | P | O4P | 107.6° | 109.5° |
C6 | N1 | C2 | 123.1° | 121.5° |
N1 | C6 | C5 | 121.9° | 120.8° |
N1 | C6 | H6 | 119.1° | 119.6° |
C6 | N1 | H19 | 118.4° | 119.2° |
N1 | C2 | C3 | 120.2° | 120.6° |
N1 | C2 | C2A | 118.4° | 119.7° |
C2 | N1 | H19 | 118.4° | 119.3° |
C2 | C3 | C4 | 116.9° | 119.2° |
C2 | C3 | O3 | 120.0° | 120.4° |
C3 | C2 | C2A | 121.4° | 119.7° |
C4 | C3 | O3 | 123.2° | 120.4° |
C3 | C4 | C5 | 118.9° | 118.6° |
C3 | C4 | C4A | 122.6° | 120.7° |
C3 | O3 | H20 | 109.5° | 114.0° |
C4 | C5 | C6 | 119.0° | 119.3° |
C4 | C5 | C5A | 121.6° | 120.3° |
C5 | C4 | C4A | 118.4° | 120.7° |
C6 | C5 | C5A | 119.4° | 120.4° |
C5 | C6 | H6 | 119.0° | 119.6° |
C5 | C5A | O4P | 117.8° | 109.5° |
C5 | C5A | H5A | 106.8° | 109.5° |
C5 | C5A | H5AA | 106.8° | 109.5° |
N | CA | CB | 124.2° | 120.0° |
CA | N | H | 113.6° | 120.0° |
CA | CB | HB | 109.6° | 109.5° |
CA | CB | HBA | 109.6° | 109.4° |
CA | CB | NE1 | 109.1° | 109.5° |
HB | CB | HBA | 109.3° | 109.5° |
HB | CB | NE1 | 109.6° | 109.5° |
HBA | CB | NE1 | 109.6° | 109.5° |
CD2 | CG | HG | 112.5° | 110.7° |
CD2 | CG | CD1 | 100.6° | 102.8° |
CG | CD2 | CE2 | 111.7° | 108.0° |
CG | CD2 | CE3 | 125.7° | 131.6° |
CD2 | CG | H21 | 112.5° | 110.7° |
HG | CG | CD1 | 112.6° | 110.7° |
HG | CG | H21 | 106.2° | 110.7° |
C2 | C2A | H2A | 109.5° | 109.5° |
C2 | C2A | H2AA | 109.5° | 109.4° |
C2 | C2A | H22 | 109.5° | 109.5° |
H2A | C2A | H2AA | 109.5° | 109.5° |
H2A | C2A | H22 | 109.5° | 109.5° |
H2AA | C2A | H22 | 109.4° | 109.5° |
O2P | P | O3P | 114.0° | 109.5° |
O2P | P | O4P | 102.8° | 109.5° |
P | O3P | HO3P | 109.5° | 114.0° |
O3P | P | O4P | 105.2° | 109.5° |
C4 | C4A | H4A | 118.6° | 120.0° |
P | O4P | C5A | 124.4° | 123.0° |
O4P | C5A | H5A | 106.8° | 109.5° |
O4P | C5A | H5AA | 106.8° | 109.4° |
H5A | C5A | H5AA | 112.0° | 109.5° |
CG | CD1 | NE1 | 108.9° | 102.6° |
CG | CD1 | HD1 | 109.6° | 110.8° |
CD1 | CG | H21 | 112.6° | 110.9° |
CG | CD1 | H23 | 109.7° | 110.8° |
NE1 | CD1 | HD1 | 109.7° | 110.7° |
CD1 | NE1 | CB | 112.4° | 111.0° |
CD1 | NE1 | CE2 | 106.3° | 108.0° |
NE1 | CD1 | H23 | 109.7° | 110.8° |
HD1 | CD1 | H23 | 109.3° | 110.9° |
CE2 | CD2 | CE3 | 122.0° | 120.5° |
CD2 | CE2 | NE1 | 111.6° | 110.9° |
CD2 | CE2 | CZ2 | 120.8° | 119.1° |
CD2 | CE3 | CZ3 | 117.8° | 120.1° |
CD2 | CE3 | HE3 | 121.1° | 119.9° |
CB | NE1 | CE2 | 114.4° | 111.0° |
NE1 | CE2 | CZ2 | 125.3° | 129.9° |
CE2 | CZ2 | CH2 | 117.8° | 120.2° |
CE2 | CZ2 | HZ2 | 121.1° | 119.9° |
CZ3 | CE3 | HE3 | 121.1° | 120.0° |
CE3 | CZ3 | CH2 | 120.6° | 119.9° |
CE3 | CZ3 | HZ3 | 119.7° | 120.1° |
HH2 | CH2 | CZ2 | 119.5° | 119.9° |
HH2 | CH2 | CZ3 | 119.6° | 119.9° |
C | OXT | HXT | 109.5° | 114.0° |
CH2 | CZ2 | HZ2 | 121.1° | 119.9° |
CZ2 | CH2 | CZ3 | 120.9° | 120.2° |
CH2 | CZ3 | HZ3 | 119.7° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C | CA | N | C4A | 161.1° | 175.9° |
CA | C | O | OXT | 179.8° | 179.6° |
C | CA | N | CB | 178.0° | 179.9° |
C | CA | CB | HB | 154.1° | 20.4° |
C | CA | CB | HBA | 34.1° | 140.4° |
C | CA | CB | NE1 | 85.9° | 99.6° |
CA | C | OXT | HXT | 179.8° | 180.0° |
C | CA | N | H | 18.9° | 4.1° |
N | C4A | C4 | C3 | 0.3° | 6.9° |
N | C4A | C4 | C5 | 179.2° | 173.1° |
C4A | N | CA | H | 180.0° | 180.0° |
C4A | N | CA | CB | 16.9° | 4.2° |
N | C4A | C4 | H4A | 180.0° | 180.0° |
O | C | CA | N | 0.4° | 180.0° |
O | C | CA | CB | 178.4° | 0.1° |
O | C | OXT | HXT | 0.0° | 0.3° |
O1P | P | O2P | O3P | 131.3° | 120.0° |
O1P | P | O2P | O4P | 115.4° | 120.0° |
O1P | P | O3P | O4P | 117.4° | 120.0° |
O1P | P | O3P | HO3P | 130.7° | 60.0° |
O1P | P | O4P | C5A | 58.6° | 65.0° |
C6 | N1 | C2 | H19 | 180.0° | 179.8° |
C6 | N1 | C2 | C3 | 0.7° | 0.0° |
N1 | C6 | C5 | C4 | 1.0° | 0.1° |
N1 | C6 | C5 | H6 | 180.0° | 179.7° |
N1 | C6 | C5 | C5A | 179.6° | 179.9° |
C6 | N1 | C2 | C2A | 179.8° | 179.9° |
N1 | C2 | C3 | C2A | 179.4° | 180.0° |
N1 | C2 | C3 | C4 | 0.6° | 0.0° |
N1 | C2 | C3 | O3 | 179.4° | 180.0° |
C2 | N1 | C6 | C5 | 1.0° | 0.0° |
C2 | N1 | C6 | H6 | 179.0° | 179.7° |
N1 | C2 | C2A | H2A | 180.0° | 0.0° |
N1 | C2 | C2A | H2AA | 60.0° | 120.0° |
N1 | C2 | C2A | H22 | 60.0° | 120.0° |
C2 | C3 | C4 | O3 | 180.0° | 180.0° |
C2 | C3 | C4 | C5 | 0.7° | 0.0° |
C3 | C2 | C2A | H2A | 0.6° | 180.0° |
C3 | C2 | C2A | H2AA | 119.4° | 60.0° |
C2 | C3 | C4 | C4A | 179.6° | 180.0° |
C3 | C2 | N1 | H19 | 179.3° | 179.8° |
C2 | C3 | O3 | H20 | 180.0° | 0.1° |
C3 | C2 | C2A | H22 | 120.6° | 59.9° |
C3 | C4 | C5 | C4A | 179.0° | 180.0° |
C3 | C4 | C5 | C6 | 0.9° | 0.1° |
C3 | C4 | C5 | C5A | 179.4° | 179.9° |
C4 | C3 | C2 | C2A | 180.0° | 179.9° |
C3 | C4 | C4A | H4A | 179.7° | 173.1° |
C4 | C3 | O3 | H20 | 0.0° | 179.9° |
O3 | C3 | C4 | C5 | 179.3° | 179.9° |
O3 | C3 | C2 | C2A | 0.0° | 0.1° |
O3 | C3 | C4 | C4A | 0.4° | 0.1° |
C4 | C5 | C6 | C5A | 178.6° | 179.9° |
C4 | C5 | C6 | H6 | 179.0° | 179.8° |
C5 | C4 | C4A | H4A | 0.8° | 6.9° |
C4 | C5 | C5A | O4P | 65.4° | 180.0° |
C4 | C5 | C5A | H5A | 174.6° | 59.9° |
C4 | C5 | C5A | H5AA | 54.6° | 60.1° |
C6 | C5 | C4 | C4A | 179.8° | 179.9° |
C6 | C5 | C5A | O4P | 113.1° | 0.1° |
C6 | C5 | C5A | H5A | 6.9° | 119.9° |
C6 | C5 | C5A | H5AA | 126.9° | 120.0° |
C5 | C6 | N1 | H19 | 179.0° | 179.7° |
C5A | C5 | C6 | H6 | 0.4° | 0.4° |
C5A | C5 | C4 | C4A | 1.6° | 0.1° |
C5 | C5A | O4P | P | 109.4° | 179.9° |
C5 | C5A | O4P | H5A | 120.0° | 120.1° |
C5 | C5A | O4P | H5AA | 120.0° | 120.0° |
C5 | C5A | H5A | H5AA | 116.6° | 120.0° |
H6 | C6 | N1 | H19 | 0.9° | 0.0° |
N | CA | CB | HB | 28.1° | 159.7° |
N | CA | CB | HBA | 148.1° | 39.7° |
CA | N | C4A | C4 | 173.6° | 175.5° |
CA | N | C4A | H4A | 6.4° | 4.4° |
N | CA | CB | NE1 | 91.9° | 80.3° |
N | CA | C | OXT | 179.8° | 0.4° |
CA | CB | HB | HBA | 120.2° | 120.0° |
CA | CB | HB | NE1 | 119.7° | 120.0° |
CA | CB | HBA | NE1 | 119.7° | 120.0° |
CA | CB | NE1 | CD1 | 89.1° | 163.9° |
CA | CB | NE1 | CE2 | 149.5° | 76.0° |
CB | CA | C | OXT | 1.7° | 179.7° |
CB | CA | N | H | 163.1° | 175.8° |
HB | CB | HBA | NE1 | 120.1° | 120.0° |
HB | CB | NE1 | CD1 | 150.9° | 76.0° |
HB | CB | NE1 | CE2 | 29.5° | 44.0° |
HBA | CB | NE1 | CD1 | 30.9° | 44.0° |
HBA | CB | NE1 | CE2 | 90.5° | 164.0° |
CD2 | CG | HG | CD1 | 112.8° | 113.4° |
CD2 | CG | HG | H21 | 123.6° | 123.2° |
CD2 | CG | CD1 | H21 | 120.0° | 118.3° |
CD2 | CG | CD1 | NE1 | 4.7° | 25.6° |
CD2 | CG | CD1 | HD1 | 124.7° | 92.6° |
CG | CD2 | CE2 | CE3 | 171.7° | 180.0° |
CG | CD2 | CE2 | NE1 | 10.3° | 0.4° |
CG | CD2 | CE2 | CZ2 | 173.7° | 179.7° |
CG | CD2 | CE3 | CZ3 | 172.4° | 179.8° |
CG | CD2 | CE3 | HE3 | 7.6° | 0.3° |
CD2 | CG | CD1 | H23 | 115.3° | 143.9° |
HG | CG | CD1 | H21 | 120.0° | 123.3° |
HG | CG | CD1 | NE1 | 115.3° | 92.7° |
HG | CG | CD1 | HD1 | 4.7° | 149.1° |
HG | CG | CD2 | CE2 | 111.2° | 102.1° |
HG | CG | CD2 | CE3 | 77.4° | 77.9° |
HG | CG | CD1 | H23 | 124.7° | 25.6° |
HO1P | O1P | P | O2P | 0.0° | 180.0° |
HO1P | O1P | P | O3P | 131.4° | 60.0° |
HO1P | O1P | P | O4P | 112.5° | 60.0° |
C2 | C2A | H2A | H2AA | 120.0° | 120.0° |
C2 | C2A | H2A | H22 | 120.0° | 120.0° |
C2 | C2A | H2AA | H22 | 120.0° | 120.0° |
C2A | C2 | N1 | H19 | 0.1° | 0.3° |
H2A | C2A | H2AA | H22 | 120.0° | 120.0° |
O2P | P | O3P | O4P | 111.8° | 120.0° |
O2P | P | O3P | HO3P | 0.0° | 60.0° |
O2P | P | O4P | C5A | 177.6° | 55.0° |
O3P | P | O4P | C5A | 62.8° | 175.0° |
HO3P | O3P | P | O4P | 111.8° | 180.0° |
C4 | C4A | N | H | 6.4° | 4.4° |
H4A | C4A | N | H | 173.6° | 175.6° |
P | O4P | C5A | H5A | 10.6° | 60.0° |
P | O4P | C5A | H5AA | 130.6° | 60.0° |
O4P | C5A | H5A | H5AA | 116.6° | 119.9° |
CG | CD1 | NE1 | HD1 | 120.0° | 118.2° |
CG | CD1 | NE1 | H23 | 120.0° | 118.3° |
CG | CD1 | HD1 | H23 | 120.2° | 123.5° |
CD1 | CG | CD2 | CE2 | 8.8° | 16.2° |
CD1 | CG | CD2 | CE3 | 162.6° | 163.8° |
CG | CD1 | NE1 | CB | 125.1° | 94.7° |
CG | CD1 | NE1 | CE2 | 0.7° | 27.1° |
NE1 | CD1 | HD1 | H23 | 120.3° | 123.4° |
CD1 | NE1 | CE2 | CD2 | 6.6° | 18.1° |
CD1 | NE1 | CB | CE2 | 121.4° | 120.0° |
CD1 | NE1 | CE2 | CZ2 | 169.1° | 162.0° |
NE1 | CD1 | CG | H21 | 124.7° | 143.9° |
HD1 | CD1 | NE1 | CB | 114.9° | 147.1° |
HD1 | CD1 | NE1 | CE2 | 119.2° | 91.1° |
HD1 | CD1 | CG | H21 | 115.3° | 25.7° |
CD2 | CE2 | NE1 | CB | 118.1° | 103.7° |
CD2 | CE2 | NE1 | CZ2 | 162.6° | 179.9° |
CE2 | CD2 | CE3 | CZ3 | 1.8° | 0.2° |
CE2 | CD2 | CE3 | HE3 | 178.2° | 179.7° |
CD2 | CE2 | CZ2 | CH2 | 0.9° | 0.3° |
CD2 | CE2 | CZ2 | HZ2 | 179.1° | 179.7° |
CE2 | CD2 | CG | H21 | 128.8° | 134.7° |
CE3 | CD2 | CE2 | NE1 | 161.5° | 179.6° |
CE3 | CD2 | CE2 | CZ2 | 2.0° | 0.3° |
CD2 | CE3 | CZ3 | HE3 | 180.0° | 179.9° |
CD2 | CE3 | CZ3 | CH2 | 0.7° | 0.0° |
CD2 | CE3 | CZ3 | HZ3 | 179.3° | 180.0° |
CE3 | CD2 | CG | H21 | 42.5° | 45.3° |
CB | NE1 | CE2 | CZ2 | 44.5° | 76.2° |
CB | NE1 | CD1 | H23 | 5.1° | 23.6° |
NE1 | CE2 | CZ2 | CH2 | 160.2° | 179.7° |
NE1 | CE2 | CZ2 | HZ2 | 19.8° | 0.3° |
CE2 | NE1 | CD1 | H23 | 120.8° | 145.4° |
CE2 | CZ2 | CH2 | HH2 | 179.8° | 180.0° |
CE2 | CZ2 | CH2 | HZ2 | 180.0° | 180.0° |
CE2 | CZ2 | CH2 | CZ3 | 0.2° | 0.1° |
CE3 | CZ3 | CH2 | HH2 | 179.7° | 179.9° |
CE3 | CZ3 | CH2 | CZ2 | 0.3° | 0.1° |
CE3 | CZ3 | CH2 | HZ3 | 180.0° | 180.0° |
HE3 | CE3 | CZ3 | CH2 | 179.3° | 179.9° |
HE3 | CE3 | CZ3 | HZ3 | 0.7° | 0.1° |
HH2 | CH2 | CZ2 | CZ3 | 180.0° | 179.9° |
HH2 | CH2 | CZ2 | HZ2 | 0.2° | 0.0° |
HH2 | CH2 | CZ3 | HZ3 | 0.3° | 0.1° |
CZ2 | CH2 | CZ3 | HZ3 | 179.7° | 179.9° |
HZ2 | CZ2 | CH2 | CZ3 | 179.8° | 180.0° |
H21 | CG | CD1 | H23 | 4.7° | 97.8° |