7BG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP2 | P | sing | 1.61Å | 1.41Å | |
| OP1 | P | sing | 1.61Å | 1.41Å | |
| P | O5' | sing | 1.61Å | 1.47Å | |
| O3' | C3' | sing | 1.43Å | 1.34Å | |
| O5' | C5' | sing | 1.43Å | 1.39Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C4' | C3' | sing | 1.54Å | 1.49Å | |
| C4' | O4' | sing | 1.44Å | 1.35Å | |
| C3' | C2' | sing | 1.54Å | 1.45Å | |
| O4' | C1' | sing | 1.44Å | 1.40Å | |
| C2' | C1' | sing | 1.54Å | 1.49Å | |
| C2' | F1' | sing | 1.40Å | 1.05Å | |
| C1' | N9 | sing | 1.46Å | 1.46Å | |
| N9 | C8 | sing | 1.37Å | 1.32Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.32Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.32Å | Aromatic |
| C4 | N3 | sing | 1.34Å | 1.32Å | |
| C4 | C5 | doub | 1.40Å | 1.32Å | Aromatic |
| N3 | C2 | doub | 1.31Å | 1.31Å | |
| N7 | C5 | sing | 1.36Å | 1.32Å | Aromatic |
| N7 | C10 | sing | 1.47Å | 1.46Å | |
| C16 | C15 | doub | 1.38Å | 1.38Å | Aromatic |
| C16 | C11 | sing | 1.38Å | 1.39Å | Aromatic |
| C15 | C14 | sing | 1.38Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.30Å | |
| C2 | N2 | sing | 1.37Å | 1.31Å | |
| C2 | N1 | sing | 1.36Å | 1.37Å | |
| C10 | C11 | sing | 1.51Å | 1.38Å | |
| C11 | C12 | doub | 1.38Å | 1.38Å | Aromatic |
| C6 | N1 | sing | 1.35Å | 1.35Å | |
| C6 | O6 | doub | 1.22Å | 1.21Å | |
| C14 | C13 | doub | 1.38Å | 1.38Å | Aromatic |
| C12 | C13 | sing | 1.38Å | 1.38Å | Aromatic |
| OP2 | H1 | sing | 0.97Å | 0.95Å | |
| OP1 | H2 | sing | 0.97Å | 0.95Å | |
| C5' | H3 | sing | 1.09Å | 1.10Å | |
| C5' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| C3' | H6 | sing | 1.09Å | 1.10Å | |
| O3' | H7 | sing | 0.97Å | 0.95Å | |
| C2' | H8 | sing | 1.09Å | 1.10Å | |
| C1' | H9 | sing | 1.09Å | 1.10Å | |
| C8 | H10 | sing | 1.08Å | 1.08Å | |
| N2 | H11 | sing | 0.97Å | 1.00Å | |
| N2 | H12 | sing | 0.97Å | 1.00Å | |
| N1 | H13 | sing | 0.97Å | 1.00Å | |
| C10 | H14 | sing | 1.09Å | 1.10Å | |
| C10 | H15 | sing | 1.09Å | 1.10Å | |
| C12 | H16 | sing | 1.08Å | 1.08Å | |
| C13 | H17 | sing | 1.08Å | 1.08Å | |
| C14 | H18 | sing | 1.08Å | 1.08Å | |
| C15 | H19 | sing | 1.08Å | 1.08Å | |
| C16 | H20 | sing | 1.08Å | 1.08Å | |
| P | O1 | doub | 1.48Å | 1.56Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP2 | P | OP1 | 120.3° | 109.5° |
| OP2 | P | O5' | 106.7° | 109.5° |
| P | OP2 | H1 | 109.5° | 114.0° |
| OP2 | P | O1 | 106.6° | 109.4° |
| OP1 | P | O5' | 108.3° | 109.5° |
| P | OP1 | H2 | 109.5° | 114.0° |
| OP1 | P | O1 | 106.1° | 109.5° |
| P | O5' | C5' | 117.5° | 123.0° |
| O5' | P | O1 | 108.4° | 109.5° |
| O3' | C3' | C4' | 107.5° | 110.5° |
| O3' | C3' | C2' | 103.8° | 110.5° |
| O3' | C3' | H6 | 114.4° | 110.6° |
| C3' | O3' | H7 | 109.5° | 114.0° |
| O5' | C5' | C4' | 110.6° | 109.5° |
| O5' | C5' | H3 | 109.2° | 109.5° |
| O5' | C5' | H4 | 109.2° | 109.4° |
| C5' | C4' | C3' | 108.7° | 110.4° |
| C5' | C4' | O4' | 102.0° | 110.4° |
| C4' | C5' | H3 | 109.2° | 109.5° |
| C4' | C5' | H4 | 109.2° | 109.5° |
| C5' | C4' | H5 | 112.3° | 110.4° |
| C3' | C4' | O4' | 104.8° | 104.8° |
| C4' | C3' | C2' | 106.0° | 104.1° |
| C3' | C4' | H5 | 112.8° | 110.3° |
| C4' | C3' | H6 | 111.9° | 110.5° |
| C4' | O4' | C1' | 105.0° | 105.3° |
| O4' | C4' | H5 | 115.5° | 110.4° |
| C3' | C2' | C1' | 101.1° | 104.1° |
| C3' | C2' | F1' | 100.7° | 110.5° |
| C2' | C3' | H6 | 112.5° | 110.5° |
| C3' | C2' | H8 | 111.5° | 110.5° |
| O4' | C1' | C2' | 109.4° | 104.8° |
| O4' | C1' | N9 | 91.6° | 110.4° |
| O4' | C1' | H9 | 112.0° | 110.4° |
| C1' | C2' | F1' | 110.1° | 110.5° |
| C2' | C1' | N9 | 120.7° | 110.4° |
| C1' | C2' | H8 | 110.9° | 110.5° |
| C2' | C1' | H9 | 110.5° | 110.4° |
| F1' | C2' | H8 | 120.4° | 110.6° |
| C1' | N9 | C8 | 123.8° | 126.3° |
| C1' | N9 | C4 | 127.8° | 126.3° |
| N9 | C1' | H9 | 111.1° | 110.4° |
| C8 | N9 | C4 | 108.0° | 107.5° |
| N9 | C8 | N7 | 107.9° | 109.8° |
| N9 | C8 | H10 | 126.1° | 125.1° |
| N9 | C4 | N3 | 130.8° | 134.2° |
| N9 | C4 | C5 | 108.0° | 106.1° |
| C8 | N7 | C5 | 108.2° | 109.4° |
| C8 | N7 | C10 | 128.1° | 125.3° |
| N7 | C8 | H10 | 126.0° | 125.2° |
| N3 | C4 | C5 | 121.2° | 119.7° |
| C4 | N3 | C2 | 118.9° | 121.1° |
| C4 | C5 | N7 | 107.8° | 107.2° |
| C4 | C5 | C6 | 121.5° | 118.6° |
| N3 | C2 | N2 | 118.3° | 119.0° |
| N3 | C2 | N1 | 120.7° | 121.9° |
| C5 | N7 | C10 | 123.7° | 125.3° |
| N7 | C5 | C6 | 130.7° | 134.1° |
| N7 | C10 | C11 | 102.5° | 109.5° |
| N7 | C10 | H14 | 111.2° | 109.5° |
| N7 | C10 | H15 | 111.2° | 109.4° |
| C15 | C16 | C11 | 120.7° | 120.0° |
| C16 | C15 | C14 | 118.4° | 120.1° |
| C16 | C15 | H19 | 120.8° | 120.0° |
| C15 | C16 | H20 | 119.7° | 120.0° |
| C16 | C11 | C10 | 118.8° | 120.0° |
| C16 | C11 | C12 | 120.5° | 120.0° |
| C11 | C16 | H20 | 119.7° | 120.0° |
| C15 | C14 | C13 | 121.3° | 119.9° |
| C15 | C14 | H18 | 119.3° | 120.1° |
| C14 | C15 | H19 | 120.8° | 120.0° |
| C5 | C6 | N1 | 118.7° | 118.3° |
| C5 | C6 | O6 | 120.7° | 120.9° |
| N2 | C2 | N1 | 121.1° | 119.1° |
| C2 | N2 | H11 | 120.0° | 120.0° |
| C2 | N2 | H12 | 120.0° | 119.9° |
| C2 | N1 | C6 | 118.9° | 120.4° |
| C2 | N1 | H13 | 120.5° | 119.8° |
| C10 | C11 | C12 | 120.7° | 119.9° |
| C11 | C10 | H14 | 111.2° | 109.5° |
| C11 | C10 | H15 | 111.2° | 109.5° |
| C11 | C12 | C13 | 118.9° | 120.0° |
| C11 | C12 | H16 | 120.5° | 120.1° |
| N1 | C6 | O6 | 120.5° | 120.8° |
| C6 | N1 | H13 | 120.6° | 119.8° |
| C14 | C13 | C12 | 120.1° | 120.0° |
| C14 | C13 | H17 | 119.9° | 120.0° |
| C13 | C14 | H18 | 119.4° | 120.0° |
| C13 | C12 | H16 | 120.6° | 119.9° |
| C12 | C13 | H17 | 119.9° | 120.0° |
| H3 | C5' | H4 | 109.5° | 109.5° |
| H11 | N2 | H12 | 120.0° | 120.0° |
| H14 | C10 | H15 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP2 | P | OP1 | O5' | 122.9° | 120.0° |
| OP2 | P | OP1 | O1 | 120.9° | 120.0° |
| OP2 | P | O5' | O1 | 114.5° | 119.9° |
| OP2 | P | O5' | C5' | 34.8° | 175.0° |
| OP2 | P | OP1 | H2 | 120.9° | 60.1° |
| OP1 | P | O5' | O1 | 114.7° | 120.1° |
| OP1 | P | O5' | C5' | 165.6° | 65.0° |
| OP1 | P | OP2 | H1 | 120.6° | 60.0° |
| P | O5' | C5' | C4' | 122.3° | 180.0° |
| O5' | P | OP2 | H1 | 115.7° | 180.0° |
| O5' | P | OP1 | H2 | 116.2° | 59.9° |
| P | O5' | C5' | H3 | 117.6° | 60.0° |
| P | O5' | C5' | H4 | 2.1° | 60.0° |
| O3' | C3' | C4' | C5' | 109.5° | 98.5° |
| O3' | C3' | C4' | C2' | 110.5° | 118.7° |
| O3' | C3' | C4' | H6 | 126.5° | 122.7° |
| O3' | C3' | C4' | O4' | 142.1° | 142.6° |
| O3' | C3' | C2' | H6 | 124.3° | 122.7° |
| O3' | C3' | C2' | C1' | 125.2° | 118.7° |
| O3' | C3' | C2' | F1' | 121.5° | 122.7° |
| O3' | C3' | C4' | H5 | 15.7° | 23.7° |
| O3' | C3' | C2' | H8 | 7.3° | 0.0° |
| O5' | C5' | C4' | H3 | 120.2° | 120.0° |
| O5' | C5' | C4' | H4 | 120.2° | 120.0° |
| O5' | C5' | C4' | C3' | 177.2° | 175.0° |
| O5' | C5' | C4' | O4' | 72.5° | 69.6° |
| O5' | C5' | H3 | H4 | 119.5° | 119.9° |
| O5' | C5' | C4' | H5 | 51.7° | 52.7° |
| C5' | O5' | P | O1 | 79.7° | 55.0° |
| C5' | C4' | C3' | O4' | 108.4° | 118.9° |
| C5' | C4' | C3' | H5 | 125.2° | 122.3° |
| C5' | C4' | O4' | H5 | 122.0° | 122.3° |
| C5' | C4' | C3' | C2' | 140.0° | 142.8° |
| C5' | C4' | O4' | C1' | 150.8° | 159.3° |
| C4' | C5' | H3 | H4 | 119.5° | 120.1° |
| C5' | C4' | C3' | H6 | 17.0° | 24.2° |
| C3' | C4' | O4' | H5 | 124.7° | 118.8° |
| C4' | C3' | C2' | H6 | 122.6° | 118.6° |
| C3' | C4' | O4' | C1' | 37.5° | 40.5° |
| C4' | C3' | C2' | C1' | 12.2° | 0.0° |
| C4' | C3' | C2' | F1' | 125.4° | 118.6° |
| C3' | C4' | C5' | H3 | 62.6° | 65.0° |
| C3' | C4' | C5' | H4 | 57.0° | 55.0° |
| C4' | C3' | O3' | H7 | 180.0° | 180.0° |
| C4' | C3' | C2' | H8 | 105.8° | 118.7° |
| O4' | C4' | C3' | C2' | 31.6° | 24.0° |
| C4' | O4' | C1' | C2' | 30.7° | 40.5° |
| C4' | O4' | C1' | N9 | 154.3° | 159.3° |
| O4' | C4' | C5' | H3 | 47.7° | 50.4° |
| O4' | C4' | C5' | H4 | 167.4° | 170.4° |
| O4' | C4' | C3' | H6 | 91.5° | 94.7° |
| C4' | O4' | C1' | H9 | 92.2° | 78.3° |
| C3' | C2' | C1' | O4' | 10.1° | 24.0° |
| C3' | C2' | C1' | F1' | 105.9° | 118.6° |
| C3' | C2' | C1' | H8 | 118.3° | 118.7° |
| C3' | C2' | F1' | H8 | 122.9° | 122.7° |
| C3' | C2' | C1' | N9 | 114.2° | 142.8° |
| C2' | C3' | C4' | H5 | 94.8° | 94.9° |
| C2' | C3' | O3' | H7 | 67.9° | 65.3° |
| C3' | C2' | C1' | H9 | 113.8° | 94.9° |
| O4' | C1' | C2' | N9 | 104.2° | 118.8° |
| O4' | C1' | C2' | H9 | 123.9° | 118.8° |
| O4' | C1' | C2' | F1' | 95.8° | 94.6° |
| O4' | C1' | N9 | H9 | 114.4° | 122.3° |
| O4' | C1' | N9 | C8 | 21.3° | 23.6° |
| O4' | C1' | N9 | C4 | 150.6° | 156.8° |
| C1' | O4' | C4' | H5 | 87.2° | 78.3° |
| O4' | C1' | C2' | H8 | 128.4° | 142.7° |
| C1' | C2' | F1' | H8 | 131.0° | 122.7° |
| C2' | C1' | N9 | H9 | 131.8° | 122.3° |
| C2' | C1' | N9 | C8 | 92.5° | 91.8° |
| C2' | C1' | N9 | C4 | 95.6° | 87.9° |
| C1' | C2' | C3' | H6 | 110.5° | 118.6° |
| F1' | C2' | C1' | N9 | 8.3° | 24.2° |
| F1' | C2' | C3' | H6 | 2.8° | 0.0° |
| F1' | C2' | C1' | H9 | 140.3° | 146.5° |
| C1' | N9 | C8 | C4 | 173.3° | 179.7° |
| C1' | N9 | C8 | N7 | 176.3° | 180.0° |
| C1' | N9 | C4 | N3 | 5.8° | 0.0° |
| C1' | N9 | C4 | C5 | 175.1° | 180.0° |
| N9 | C1' | C2' | H8 | 127.5° | 98.5° |
| C1' | N9 | C8 | H10 | 3.7° | 0.1° |
| N9 | C8 | N7 | H10 | 180.0° | 179.9° |
| C8 | N9 | C4 | N3 | 178.7° | 179.8° |
| C8 | N9 | C4 | C5 | 2.1° | 0.3° |
| N9 | C8 | N7 | C5 | 2.7° | 0.1° |
| N9 | C8 | N7 | C10 | 179.6° | 180.0° |
| C8 | N9 | C1' | H9 | 135.7° | 145.9° |
| C4 | N9 | C8 | N7 | 3.0° | 0.3° |
| N9 | C4 | N3 | C5 | 179.0° | 180.0° |
| N9 | C4 | N3 | C2 | 179.1° | 180.0° |
| N9 | C4 | C5 | N7 | 0.4° | 0.2° |
| N9 | C4 | C5 | C6 | 179.0° | 180.0° |
| C4 | N9 | C1' | H9 | 36.2° | 34.5° |
| C4 | N9 | C8 | H10 | 177.0° | 179.8° |
| C8 | N7 | C5 | C4 | 1.4° | 0.1° |
| C8 | N7 | C5 | C10 | 177.9° | 179.9° |
| C8 | N7 | C5 | C6 | 179.2° | 179.8° |
| C8 | N7 | C10 | C11 | 119.8° | 95.0° |
| C8 | N7 | C10 | H14 | 0.9° | 25.0° |
| C8 | N7 | C10 | H15 | 121.4° | 145.0° |
| N3 | C4 | C5 | N7 | 179.7° | 179.8° |
| N3 | C4 | C5 | C6 | 0.2° | 0.1° |
| C4 | N3 | C2 | N2 | 179.8° | 180.0° |
| C4 | N3 | C2 | N1 | 0.3° | 0.0° |
| C5 | C4 | N3 | C2 | 0.0° | 0.1° |
| C4 | C5 | N7 | C6 | 179.4° | 179.7° |
| C4 | C5 | N7 | C10 | 179.3° | 179.8° |
| C4 | C5 | C6 | N1 | 0.2° | 0.1° |
| C4 | C5 | C6 | O6 | 179.5° | 180.0° |
| N3 | C2 | N2 | N1 | 179.9° | 180.0° |
| N3 | C2 | N1 | C6 | 0.4° | 0.0° |
| N3 | C2 | N2 | H11 | 0.0° | 0.0° |
| N3 | C2 | N2 | H12 | 180.0° | 180.0° |
| N3 | C2 | N1 | H13 | 179.6° | 180.0° |
| C5 | N7 | C10 | C11 | 57.6° | 85.1° |
| N7 | C5 | C6 | N1 | 179.5° | 179.7° |
| N7 | C5 | C6 | O6 | 1.2° | 0.3° |
| C5 | N7 | C8 | H10 | 177.3° | 179.9° |
| C5 | N7 | C10 | H14 | 176.5° | 154.8° |
| C5 | N7 | C10 | H15 | 61.2° | 34.8° |
| N7 | C10 | C11 | C16 | 50.3° | 90.2° |
| C10 | N7 | C5 | C6 | 1.4° | 0.1° |
| N7 | C10 | C11 | H14 | 118.9° | 120.1° |
| N7 | C10 | C11 | H15 | 118.9° | 119.9° |
| N7 | C10 | C11 | C12 | 127.1° | 90.1° |
| C10 | N7 | C8 | H10 | 0.4° | 0.1° |
| N7 | C10 | H14 | H15 | 123.2° | 120.0° |
| C15 | C16 | C11 | H20 | 180.0° | 179.4° |
| C16 | C15 | C14 | H19 | 180.0° | 179.7° |
| C15 | C16 | C11 | C10 | 177.2° | 179.7° |
| C15 | C16 | C11 | C12 | 0.3° | 0.6° |
| C16 | C15 | C14 | C13 | 1.0° | 0.3° |
| C16 | C15 | C14 | H18 | 179.0° | 179.7° |
| C11 | C16 | C15 | C14 | 1.5° | 0.6° |
| C16 | C11 | C10 | C12 | 177.4° | 179.7° |
| C16 | C11 | C12 | C13 | 1.3° | 0.3° |
| C16 | C11 | C10 | H14 | 68.6° | 149.7° |
| C16 | C11 | C10 | H15 | 169.2° | 29.7° |
| C16 | C11 | C12 | H16 | 178.6° | 179.8° |
| C11 | C16 | C15 | H19 | 178.5° | 179.7° |
| C15 | C14 | C13 | H18 | 180.0° | 180.0° |
| C15 | C14 | C13 | C12 | 0.6° | 0.1° |
| C15 | C14 | C13 | H17 | 179.4° | 180.0° |
| C14 | C15 | C16 | H20 | 178.5° | 180.0° |
| C5 | C6 | N1 | C2 | 0.1° | 0.0° |
| C5 | C6 | N1 | O6 | 179.3° | 179.9° |
| C5 | C6 | N1 | H13 | 179.9° | 180.0° |
| N2 | C2 | N1 | C6 | 179.8° | 180.0° |
| C2 | N2 | H11 | H12 | 180.0° | 180.0° |
| N2 | C2 | N1 | H13 | 0.2° | 0.0° |
| C2 | N1 | C6 | H13 | 180.0° | 180.0° |
| C2 | N1 | C6 | O6 | 179.2° | 180.0° |
| N1 | C2 | N2 | H11 | 179.9° | 180.0° |
| N1 | C2 | N2 | H12 | 0.1° | 0.0° |
| C10 | C11 | C12 | C13 | 178.7° | 180.0° |
| C11 | C10 | H14 | H15 | 123.2° | 120.0° |
| C10 | C11 | C12 | H16 | 1.2° | 0.1° |
| C10 | C11 | C16 | H20 | 2.8° | 0.3° |
| C11 | C12 | C13 | C14 | 1.8° | 0.1° |
| C11 | C12 | C13 | H16 | 180.0° | 179.9° |
| C12 | C11 | C10 | H14 | 114.0° | 30.0° |
| C12 | C11 | C10 | H15 | 8.3° | 150.0° |
| C11 | C12 | C13 | H17 | 178.2° | 180.0° |
| C12 | C11 | C16 | H20 | 179.7° | 180.0° |
| O6 | C6 | N1 | H13 | 0.8° | 0.1° |
| C14 | C13 | C12 | H17 | 180.0° | 180.0° |
| C14 | C13 | C12 | H16 | 178.2° | 180.0° |
| C13 | C14 | C15 | H19 | 178.9° | 180.0° |
| C12 | C13 | C14 | H18 | 179.4° | 180.0° |
| H1 | OP2 | P | O1 | 0.0° | 60.0° |
| H2 | OP1 | P | O1 | 0.0° | 180.0° |
| H3 | C5' | C4' | H5 | 171.9° | 172.7° |
| H4 | C5' | C4' | H5 | 68.5° | 67.2° |
| H5 | C4' | C3' | H6 | 142.2° | 146.4° |
| H6 | C3' | O3' | H7 | 55.1° | 57.4° |
| H6 | C3' | C2' | H8 | 131.6° | 122.7° |
| H8 | C2' | C1' | H9 | 4.5° | 23.8° |
| H16 | C12 | C13 | H17 | 1.8° | 0.1° |
| H17 | C13 | C14 | H18 | 0.6° | 0.0° |
| H18 | C14 | C15 | H19 | 1.0° | 0.0° |
| H19 | C15 | C16 | H20 | 1.5° | 0.3° |
