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77Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3'C3'sing1.43Å1.38Å
OP1Pdoub1.48Å1.48Å
C3'C4'sing1.55Å1.51Å
C3'C2'sing1.55Å1.49Å
C4'C5'sing1.53Å1.46Å
C4'O4'sing1.45Å1.43Å
C2'C1'sing1.54Å1.61Å
C5'O5'sing1.43Å1.45Å
PO5'sing1.61Å1.59Å
POP2sing1.61Å1.54Å
O4'C1'sing1.44Å1.43Å
C1'N1sing1.46Å1.49Å
O2C2doub1.22Å1.22Å
N1C2sing1.34Å1.38Å
N1C6sing1.37Å1.34Å
C2N3sing1.34Å1.33Å
C28C29doub1.39Å1.38ÅAromatic
C28C27sing1.38Å1.40ÅAromatic
C6C5doub1.37Å1.41Å
C29C30sing1.37Å1.39ÅAromatic
C27C14doub1.39Å1.38ÅAromatic
N3C4sing1.35Å1.32Å
C30C13doub1.40Å1.36ÅAromatic
C5C4sing1.47Å1.46Å
C5C7sing1.48Å1.46Å
C4O4doub1.22Å1.29Å
C1C7doub1.33Å1.36Å
C1C3sing1.51Å1.48Å
C14C13sing1.41Å1.43ÅAromatic
C14N15sing1.38Å1.34ÅAromatic
C13C12sing1.47Å1.43ÅAromatic
C3N9sing1.46Å1.48Å
N15C16sing1.37Å1.35ÅAromatic
O34C32doub1.21Å1.24Å
C12C16doub1.34Å1.43ÅAromatic
C12C33sing1.51Å1.50Å
N9C32sing1.35Å1.30Å
C32C33sing1.51Å1.55Å
C6H1sing1.08Å1.08Å
C1H2sing1.08Å1.08Å
C29H3sing1.08Å1.08Å
C28H4sing1.08Å1.08Å
C27H5sing1.08Å1.08Å
C30H6sing1.08Å1.08Å
C3H7sing1.09Å1.10Å
C3H8sing1.09Å1.10Å
C16H9sing1.08Å1.08Å
C33H10sing1.09Å1.10Å
C33H11sing1.09Å1.10Å
N15H12sing0.97Å1.00Å
N9H13sing0.97Å1.00Å
C7H14sing1.08Å1.08Å
N3H15sing0.97Å1.00Å
C1'H16sing1.09Å1.10Å
C2'H17sing1.09Å1.10Å
C2'H18sing1.09Å1.10Å
C3'H19sing1.09Å1.10Å
O3'H20sing0.97Å0.95Å
C4'H21sing1.09Å1.10Å
C5'H22sing1.09Å1.10Å
C5'H23sing1.09Å1.10Å
OP2H25sing0.97Å0.95Å
POP3sing1.61Å1.56Å
OP3H27sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3'C3'C4'117.9°110.9°
O3'C3'C2'103.2°111.0°
O3'C3'H19109.6°110.8°
C3'O3'H20109.5°114.0°
OP1PO5'114.3°109.5°
OP1POP2120.7°109.4°
OP1POP3108.5°109.5°
C4'C3'C2'109.9°102.1°
C3'C4'C5'116.4°110.6°
C3'C4'O4'98.8°103.6°
C4'C3'H19107.8°110.9°
C3'C4'H21108.5°110.6°
C3'C2'C1'93.6°104.2°
C3'C2'H17113.3°110.5°
C3'C2'H18113.3°110.6°
C2'C3'H19108.1°110.8°
C5'C4'O4'114.0°110.7°
C4'C5'O5'109.0°109.5°
C5'C4'H21109.1°110.6°
C4'C5'H22109.6°109.5°
C4'C5'H23109.6°109.5°
C4'O4'C1'114.3°106.9°
O4'C4'H21109.5°110.6°
C2'C1'O4'103.3°107.4°
C2'C1'N1115.4°109.9°
C2'C1'H16109.0°109.9°
C1'C2'H17113.3°110.5°
C1'C2'H18113.3°110.5°
C5'O5'P112.3°123.0°
O5'C5'H22109.6°109.5°
O5'C5'H23109.6°109.4°
O5'POP2100.3°109.4°
O5'POP3106.8°109.5°
POP2H25109.5°114.0°
OP2POP3105.1°109.5°
O4'C1'N1106.6°109.9°
O4'C1'H16111.6°109.9°
C1'N1C2119.1°119.3°
C1'N1C6116.9°119.4°
N1C1'H16110.7°109.8°
O2C2N1118.7°119.0°
O2C2N3121.9°119.1°
C2N1C6123.8°121.3°
N1C2N3119.3°121.9°
N1C6C5118.3°119.5°
N1C6H1120.8°120.2°
C2N3C4120.7°120.3°
C2N3H15119.6°119.8°
C29C28C27122.5°120.7°
C28C29C30115.0°120.5°
C28C29H3122.5°119.7°
C29C28H4118.8°119.7°
C28C27C14122.6°119.7°
C27C28H4118.8°119.7°
C28C27H5118.7°120.1°
C6C5C4115.8°118.3°
C6C5C7123.5°120.9°
C5C6H1120.9°120.3°
C29C30C13123.3°119.7°
C30C29H3122.5°119.7°
C29C30H6118.3°120.1°
C27C14C13114.3°119.3°
C27C14N15136.5°133.5°
C14C27H5118.7°120.2°
N3C4C5122.0°118.7°
N3C4O4121.0°120.7°
C4N3H15119.7°119.9°
C30C13C14122.2°120.0°
C30C13C12132.3°134.0°
C13C30H6118.4°120.1°
C4C5C7120.1°120.9°
C5C4O4116.9°120.7°
C5C7C1126.8°120.0°
C5C7H14116.6°120.0°
C7C1C3124.9°120.0°
C7C1H2117.6°120.0°
C1C7H14116.6°120.0°
C1C3N9111.2°109.5°
C3C1H2117.6°120.0°
C1C3H7109.1°109.4°
C1C3H8109.1°109.4°
C13C14N15109.1°107.2°
C14C13C12105.4°106.0°
C14N15C16110.7°109.9°
C14N15H12124.7°125.1°
C13C12C16106.6°107.0°
C13C12C33128.3°126.5°
C3N9C32117.3°120.0°
N9C3H7109.0°109.4°
N9C3H8109.1°109.5°
C3N9H13121.4°120.0°
N15C16C12108.1°109.9°
N15C16H9125.9°125.0°
C16N15H12124.7°125.0°
O34C32N9129.8°120.0°
O34C32C33118.2°120.0°
C16C12C33124.5°126.5°
C12C16H9126.0°125.0°
C12C33C32112.2°109.5°
C12C33H10108.8°109.5°
C12C33H11108.8°109.5°
N9C32C33111.8°120.1°
C32N9H13121.3°119.9°
C32C33H10108.8°109.4°
C32C33H11108.8°109.4°
H7C3H8109.4°109.5°
H10C33H11109.5°109.5°
H17C2'H18109.5°110.5°
H22C5'H23109.5°109.5°
POP3H27109.5°114.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3'C3'C4'C2'117.8°118.3°
O3'C3'C4'H19124.6°123.6°
O3'C3'C2'H19116.0°123.6°
O3'C3'C4'C5'154.3°86.2°
O3'C3'C4'O4'83.2°155.2°
O3'C3'C2'C1'82.3°139.1°
O3'C3'C2'H17160.4°20.4°
O3'C3'C2'H1835.0°102.2°
O3'C3'C4'H2130.9°36.7°
OP1PO5'C5'39.2°55.1°
OP1PO5'OP2130.6°119.9°
OP1PO5'OP3120.0°120.1°
OP1POP2OP3122.9°120.1°
OP1POP2H250.0°60.1°
OP1POP3H270.0°180.0°
C4'C3'C2'H19117.4°118.2°
C3'C4'C5'O4'114.1°114.2°
C3'C4'C5'H21123.1°122.9°
C3'C4'O4'H21113.3°118.6°
C4'C3'C2'C1'44.3°20.9°
C3'C4'C5'O5'48.4°175.0°
C3'C4'O4'C1'6.5°39.9°
C4'C3'C2'H1773.0°97.8°
C4'C3'C2'H18161.6°139.6°
C4'C3'O3'H20180.0°180.0°
C3'C4'C5'H22168.4°55.0°
C3'C4'C5'H2371.5°65.1°
C2'C3'C4'C5'87.9°155.6°
C2'C3'C4'O4'34.6°37.0°
C3'C2'C1'H17117.2°118.7°
C3'C2'C1'H18117.3°118.8°
C3'C2'C1'O4'37.1°2.0°
C3'C2'C1'N1153.0°121.5°
C3'C2'C1'H1681.7°117.6°
C3'C2'H17H18127.5°122.7°
C2'C3'O3'H2058.7°67.3°
C2'C3'C4'H21148.7°81.6°
C5'C4'O4'H21122.6°122.9°
C4'C5'O5'H22119.9°120.1°
C4'C5'O5'H23119.9°120.0°
C4'C5'O5'P133.1°180.0°
C5'C4'O4'C1'117.7°158.5°
C5'C4'C3'H1929.7°37.4°
C4'C5'H22H23120.2°120.1°
C4'O4'C1'C2'20.3°26.4°
O4'C4'C5'O5'65.7°70.8°
C4'O4'C1'N1142.4°145.8°
C4'O4'C1'H1696.7°93.2°
O4'C4'C3'H19152.2°81.2°
O4'C4'C5'H2254.3°169.2°
O4'C4'C5'H23174.4°49.1°
C2'C1'O4'N1122.1°119.5°
C2'C1'O4'H16117.0°119.5°
C2'C1'N1H16124.4°121.0°
C2'C1'N1C2126.8°64.7°
C2'C1'N1C658.5°114.7°
C1'C2'H17H18127.5°122.6°
C1'C2'C3'H19161.7°97.3°
C5'O5'POP2169.8°175.0°
O5'C5'C4'H21171.6°52.1°
O5'C5'H22H23120.2°119.9°
C5'O5'POP380.8°65.0°
O5'POP2OP3110.7°120.0°
PO5'C5'H22107.0°59.9°
PO5'C5'H2313.2°60.0°
O5'POP2H25126.4°180.0°
O5'POP3H27123.7°59.9°
OP2POP3H27130.4°60.0°
O4'C1'N1H16121.5°121.0°
O4'C1'N1C2119.2°53.3°
O4'C1'N1C655.6°127.3°
O4'C1'C2'H1780.2°120.6°
O4'C1'C2'H18154.3°116.8°
C1'O4'C4'H21119.8°78.6°
C1'N1C2O24.1°0.4°
C1'N1C2C6174.4°179.4°
C1'N1C2N3177.5°180.0°
C1'N1C6C5177.1°180.0°
C1'N1C6H12.9°0.4°
N1C1'C2'H1735.8°119.9°
N1C1'C2'H1889.7°2.7°
O2C2N1N3178.4°179.6°
O2C2N1C6178.4°179.7°
O2C2N3C4179.2°179.9°
O2C2N3H150.8°0.3°
C2N1C6C52.6°0.6°
N1C2N3C42.4°0.3°
C2N1C6H1177.4°179.7°
N1C2N3H15177.6°179.9°
C2N1C1'H162.4°174.3°
C6N1C2N33.1°0.6°
N1C6C5H1180.0°179.7°
N1C6C5C41.5°0.3°
N1C6C5C7172.5°179.7°
C6N1C1'H16177.1°6.3°
C2N3C4H15180.0°179.7°
C2N3C4C51.5°0.0°
C2N3C4O4179.3°180.0°
C29C28C27H4180.0°179.9°
C28C29C30H3180.0°179.7°
C29C28C27C140.8°0.0°
C28C29C30C132.0°0.3°
C29C28C27H5179.1°179.9°
C28C29C30H6178.0°179.7°
C27C28C29C300.9°0.0°
C28C27C14H5180.0°180.0°
C28C27C14C131.4°0.3°
C28C27C14N15179.5°180.0°
C27C28C29H3179.1°179.7°
C6C5C4N31.0°0.0°
C6C5C4C7171.3°180.0°
C6C5C4O4179.8°180.0°
C6C5C7C124.8°174.4°
C6C5C7H14155.2°5.5°
C29C30C13H6180.0°180.0°
C29C30C13C141.4°0.5°
C29C30C13C12174.5°180.0°
C30C29C28H4179.1°180.0°
C27C14C13C300.3°0.5°
C27C14C13N15178.6°179.8°
C27C14C13C12177.2°179.8°
C27C14N15C16178.3°179.9°
C14C27C28H4179.1°180.0°
C27C14N15H121.7°0.0°
N3C4C5O4179.2°180.0°
N3C4C5C7172.3°180.0°
C30C13C14C12176.8°179.6°
C30C13C14N15178.9°179.7°
C30C13C12C16179.6°179.5°
C30C13C12C338.9°0.5°
C13C30C29H3178.0°180.0°
C4C5C7C1145.8°5.6°
C4C5C6H1178.5°179.9°
C4C5C7H1434.2°174.5°
C5C4N3H15178.5°179.7°
C7C5C4O48.5°0.0°
C5C7C1H14180.0°179.9°
C5C7C1C3175.0°174.9°
C7C5C6H17.5°0.0°
C5C7C1H25.0°5.1°
O4C4N3H150.7°0.3°
C7C1C3H2180.0°180.0°
C7C1C3N9106.0°125.0°
C7C1C3H7133.8°115.0°
C7C1C3H814.3°5.0°
C1C3N9H7120.3°119.9°
C1C3N9H8120.3°120.0°
C1C3N9C32131.3°180.0°
C1C3H7H8119.2°120.0°
C1C3N9H1348.8°0.1°
C3C1C7H145.0°5.0°
C13C14N15C163.6°0.2°
C14C13C12C163.2°0.1°
C14C13C12C33174.7°179.9°
C13C14C27H5178.5°179.7°
C14C13C30H6178.6°179.4°
C13C14N15H12176.4°179.7°
N15C14C13C124.2°0.1°
C14N15C16H12180.0°179.9°
C14N15C16C121.5°0.3°
N15C14C27H50.5°0.0°
C14N15C16H9178.5°179.8°
C13C12C16N151.2°0.2°
C13C12C16C33171.9°180.0°
C13C12C33C3270.3°85.0°
C12C13C30H65.5°0.1°
C13C12C16H9178.8°179.9°
C13C12C33H1050.1°35.0°
C13C12C33H11169.3°155.0°
C3N9C32O345.4°0.1°
C3N9C32H13180.0°179.9°
C3N9C32C33179.9°180.0°
N9C3C1H274.0°55.0°
N9C3H7H8119.2°120.1°
N15C16C12H9180.0°179.9°
N15C16C12C33173.1°179.8°
O34C32C33C1238.5°0.1°
O34C32N9C33174.7°179.9°
O34C32C33H10158.9°120.1°
O34C32C33H1182.0°120.0°
O34C32N9H13174.6°180.0°
C16C12C33C32119.6°95.0°
C16C12C33H10120.0°145.0°
C16C12C33H110.8°25.0°
C12C16N15H12178.5°179.6°
C12C33C32N9136.9°180.0°
C12C33C32H10120.4°120.0°
C12C33C32H11120.4°120.0°
C33C12C16H96.9°0.1°
C12C33H10H11118.8°120.1°
C32N9C3H711.0°60.1°
C32N9C3H8108.4°60.0°
N9C32C33H1016.5°60.0°
N9C32C33H11102.7°59.9°
C32C33H10H11118.7°119.9°
C33C32N9H130.1°0.1°
H2C1C3H746.2°64.9°
H2C1C3H8165.7°175.0°
H2C1C7H14174.9°175.0°
H3C29C28H40.8°0.3°
H3C29C30H62.0°0.0°
H4C28C27H50.9°0.0°
H7C3N9H13169.0°120.0°
H8C3N9H1371.5°119.9°
H9C16N15H121.5°0.3°
H16C1'C2'H17161.0°1.1°
H16C1'C2'H1835.5°123.6°
H17C2'C3'H1944.4°144.0°
H18C2'C3'H1981.0°21.4°
H19C3'O3'H2056.3°56.3°
H19C3'C4'H2193.7°160.3°
H21C4'C5'H2268.5°67.9°
H21C4'C5'H2351.7°172.0°
H25OP2POP3122.9°60.0°

223532

PDB entries from 2024-08-07

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