73W

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O2'	C2'	sing	1.43Å	1.39Å
O3'	C3'	sing	1.43Å	1.39Å
C5'	C4'	sing	1.53Å	1.50Å
C5'	O5'	sing	1.43Å	1.40Å
C4'	C3'	sing	1.54Å	1.56Å
C4'	O4'	sing	1.44Å	1.43Å
SP1	P	sing	2.12Å	1.99Å
C3'	C2'	sing	1.55Å	1.55Å
C2'	C1'	sing	1.55Å	1.58Å
O4'	C1'	sing	1.44Å	1.42Å
O5'	P	sing	1.61Å	1.70Å
C1'	N1	sing	1.46Å	1.51Å
P	SP2	doub	1.86Å	2.01Å
N1	C2	sing	1.35Å	1.47Å
N1	C6	sing	1.36Å	1.35Å
O2	C2	doub	1.22Å	1.22Å
C2	N3	sing	1.33Å	1.40Å
C6	C5	doub	1.35Å	1.36Å
C5	C4	sing	1.41Å	1.43Å
N3	C4	doub	1.33Å	1.35Å
C4	N4	sing	1.38Å	1.36Å
C5	H1	sing	1.08Å	1.08Å
C6	H2	sing	1.08Å	1.08Å
C1'	H3	sing	1.09Å	1.10Å
C2'	H4	sing	1.09Å	1.10Å
C3'	H5	sing	1.09Å	1.10Å
C4'	H6	sing	1.09Å	1.10Å
C5'	H7	sing	1.09Å	1.10Å
C5'	H8	sing	1.09Å	1.10Å
N4	H9	sing	0.97Å	1.00Å
N4	H10	sing	0.97Å	1.00Å
O2'	H11	sing	0.97Å	0.95Å
O3'	H12	sing	0.97Å	0.95Å
SP1	H13	sing	1.35Å	1.30Å
P	O1	sing	1.61Å	1.58Å
O1	H16	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2'	C2'	C3'	108.4°	111.0°
O2'	C2'	C1'	104.8°	110.9°
O2'	C2'	H4	115.7°	110.8°
C2'	O2'	H11	109.5°	114.0°
O3'	C3'	C4'	113.3°	110.6°
O3'	C3'	C2'	112.5°	110.5°
O3'	C3'	H5	112.7°	110.5°
C3'	O3'	H12	109.5°	114.0°
C4'	C5'	O5'	102.5°	109.5°
C5'	C4'	C3'	113.5°	109.9°
C5'	C4'	O4'	108.3°	109.9°
C5'	C4'	H6	110.5°	110.0°
C4'	C5'	H7	111.2°	109.5°
C4'	C5'	H8	111.2°	109.5°
C5'	O5'	P	120.3°	123.0°
O5'	C5'	H7	111.2°	109.5°
O5'	C5'	H8	111.2°	109.5°
C3'	C4'	O4'	103.2°	107.4°
C4'	C3'	C2'	96.8°	104.2°
C4'	C3'	H5	110.1°	110.5°
C3'	C4'	H6	109.6°	109.8°
C4'	O4'	C1'	109.8°	106.9°
O4'	C4'	H6	111.5°	109.7°
SP1	P	O5'	101.7°	109.4°
SP1	P	SP2	110.9°	109.5°
P	SP1	H13	102.0°	103.0°
SP1	P	O1	116.1°	109.5°
C3'	C2'	C1'	100.9°	102.1°
C3'	C2'	H4	113.1°	110.9°
C2'	C3'	H5	110.3°	110.4°
C2'	C1'	O4'	105.1°	103.6°
C2'	C1'	N1	110.7°	110.6°
C2'	C1'	H3	108.0°	110.6°
C1'	C2'	H4	112.6°	110.9°
O4'	C1'	N1	114.0°	110.6°
O4'	C1'	H3	110.0°	110.6°
O5'	P	SP2	107.8°	109.5°
O5'	P	O1	110.0°	109.4°
C1'	N1	C2	119.1°	119.9°
C1'	N1	C6	121.5°	119.8°
N1	C1'	H3	108.8°	110.6°
SP2	P	O1	109.9°	109.5°
C2	N1	C6	119.4°	120.3°
N1	C2	O2	118.6°	119.5°
N1	C2	N3	119.2°	121.1°
N1	C6	C5	121.7°	119.3°
N1	C6	H2	119.1°	120.4°
O2	C2	N3	122.2°	119.4°
C2	N3	C4	117.8°	120.7°
C6	C5	C4	118.3°	119.0°
C6	C5	H1	120.8°	120.6°
C5	C6	H2	119.1°	120.3°
C5	C4	N3	123.5°	119.6°
C5	C4	N4	118.3°	120.2°
C4	C5	H1	120.8°	120.5°
N3	C4	N4	118.2°	120.2°
C4	N4	H9	120.0°	120.0°
C4	N4	H10	120.0°	120.0°
H7	C5'	H8	109.5°	109.5°
H9	N4	H10	120.0°	120.0°
P	O1	H16	109.5°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2'	C2'	C3'	O3'	52.4°	20.3°
O2'	C2'	C3'	C4'	66.4°	139.1°
O2'	C2'	C3'	C1'	109.8°	118.2°
O2'	C2'	C3'	H4	129.8°	123.6°
O2'	C2'	C1'	H4	126.6°	123.5°
O2'	C2'	C1'	O4'	85.5°	155.2°
O2'	C2'	C1'	N1	151.0°	86.2°
O2'	C2'	C1'	H3	31.9°	36.6°
O2'	C2'	C3'	H5	179.2°	102.2°
O3'	C3'	C4'	C5'	77.7°	119.8°
O3'	C3'	C4'	C2'	118.1°	118.7°
O3'	C3'	C4'	H5	127.3°	122.7°
O3'	C3'	C4'	O4'	165.2°	120.6°
O3'	C3'	C2'	H5	126.8°	122.5°
O3'	C3'	C2'	C1'	162.2°	98.0°
O3'	C3'	C2'	H4	77.4°	143.9°
O3'	C3'	C4'	H6	46.4°	1.3°
C4'	C5'	O5'	H7	118.9°	120.0°
C4'	C5'	O5'	H8	118.9°	120.0°
C5'	C4'	C3'	O4'	117.0°	119.6°
C5'	C4'	C3'	H6	124.1°	121.1°
C5'	C4'	O4'	H6	121.8°	121.1°
C5'	C4'	C3'	C2'	164.2°	121.4°
C5'	C4'	O4'	C1'	153.0°	145.8°
C4'	C5'	O5'	P	169.8°	180.0°
C5'	C4'	C3'	H5	49.6°	2.9°
C4'	C5'	H7	H8	123.2°	120.0°
O5'	C5'	C4'	C3'	78.7°	174.9°
O5'	C5'	C4'	O4'	35.3°	67.1°
C5'	O5'	P	SP1	32.9°	75.1°
C5'	O5'	P	SP2	149.6°	45.0°
O5'	C5'	C4'	H6	157.7°	53.9°
O5'	C5'	H7	H8	123.2°	120.0°
C5'	O5'	P	O1	90.6°	165.0°
C3'	C4'	O4'	H6	117.5°	119.3°
C4'	C3'	C2'	H5	114.4°	118.6°
C4'	C3'	C2'	C1'	43.4°	20.9°
C3'	C4'	O4'	C1'	32.3°	26.2°
C4'	C3'	C2'	H4	163.8°	97.2°
C3'	C4'	C5'	H7	162.4°	55.0°
C3'	C4'	C5'	H8	40.2°	65.0°
C4'	C3'	O3'	H12	180.0°	176.3°
O4'	C4'	C3'	C2'	47.1°	1.9°
C4'	O4'	C1'	C2'	3.3°	39.8°
C4'	O4'	C1'	N1	124.7°	158.4°
C4'	O4'	C1'	H3	112.8°	78.7°
O4'	C4'	C3'	H5	67.5°	116.7°
O4'	C4'	C5'	H7	83.6°	173.0°
O4'	C4'	C5'	H8	154.2°	53.0°
SP1	P	O5'	SP2	116.7°	120.0°
SP1	P	O5'	O1	123.5°	120.0°
SP1	P	SP2	O1	129.7°	120.0°
SP1	P	O1	H16	126.8°	60.0°
C3'	C2'	C1'	H4	120.8°	118.2°
C3'	C2'	C1'	O4'	27.1°	36.9°
C3'	C2'	C1'	N1	96.4°	155.5°
C3'	C2'	C1'	H3	144.5°	81.6°
C2'	C3'	C4'	H6	71.8°	117.4°
C3'	C2'	O2'	H11	180.0°	67.3°
C2'	C3'	O3'	H12	71.4°	61.5°
C2'	C1'	O4'	N1	121.4°	118.6°
C2'	C1'	O4'	H3	116.0°	118.6°
C2'	C1'	N1	H3	118.5°	122.9°
C2'	C1'	N1	C2	70.3°	62.8°
C2'	C1'	N1	C6	110.8°	117.2°
C1'	C2'	C3'	H5	71.0°	139.5°
C1'	C2'	O2'	H11	72.9°	179.9°
O4'	C1'	N1	H3	123.2°	122.9°
O4'	C1'	N1	C2	171.4°	51.4°
O4'	C1'	N1	C6	7.5°	128.6°
O4'	C1'	C2'	H4	147.9°	81.3°
C1'	O4'	C4'	H6	85.2°	93.1°
O5'	P	SP2	O1	119.8°	120.0°
P	O5'	C5'	H7	50.9°	60.0°
P	O5'	C5'	H8	71.3°	59.9°
O5'	P	SP1	H13	180.0°	180.0°
O5'	P	O1	H16	118.5°	59.9°
C1'	N1	C2	C6	178.9°	180.0°
C1'	N1	C2	O2	0.4°	0.1°
C1'	N1	C2	N3	179.8°	179.7°
C1'	N1	C6	C5	179.8°	180.0°
C1'	N1	C6	H2	0.2°	0.2°
N1	C1'	C2'	H4	24.4°	37.3°
SP2	P	SP1	H13	65.7°	60.0°
SP2	P	O1	H16	0.0°	179.9°
N1	C2	O2	N3	179.7°	179.7°
C2	N1	C6	C5	0.9°	0.0°
N1	C2	N3	C4	0.4°	0.3°
C2	N1	C6	H2	179.1°	179.8°
C2	N1	C1'	H3	48.2°	174.3°
C6	N1	C2	O2	179.3°	179.9°
C6	N1	C2	N3	0.9°	0.3°
N1	C6	C5	H2	180.0°	179.7°
N1	C6	C5	C4	0.4°	0.3°
N1	C6	C5	H1	179.6°	180.0°
C6	N1	C1'	H3	130.7°	5.7°
O2	C2	N3	C4	179.9°	180.0°
C2	N3	C4	C5	0.1°	0.1°
C2	N3	C4	N4	180.0°	180.0°
C6	C5	C4	H1	180.0°	179.8°
C6	C5	C4	N3	0.2°	0.2°
C6	C5	C4	N4	180.0°	179.7°
C5	C4	N3	N4	179.8°	179.9°
C4	C5	C6	H2	179.6°	180.0°
C5	C4	N4	H9	179.8°	0.1°
C5	C4	N4	H10	0.2°	180.0°
N3	C4	C5	H1	179.9°	180.0°
N3	C4	N4	H9	0.0°	180.0°
N3	C4	N4	H10	180.0°	0.0°
N4	C4	C5	H1	0.0°	0.0°
C4	N4	H9	H10	180.0°	180.0°
H1	C5	C6	H2	0.4°	0.3°
H3	C1'	C2'	H4	94.7°	160.2°
H4	C2'	C3'	H5	49.4°	21.4°
H4	C2'	O2'	H11	51.7°	56.4°
H5	C3'	C4'	H6	173.6°	124.0°
H5	C3'	O3'	H12	54.1°	61.0°
H6	C4'	C5'	H7	38.9°	66.1°
H6	C4'	C5'	H8	83.4°	173.9°
H13	SP1	P	O1	60.7°	60.0°

Release date:	2017-02-08
Definition date:	2016-08-19
Last modified:	2017-02-03
Release status:	REL
Processing site:	RCSB
Derived from:	5T16