6ZH
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N6 | C6 | sing | 1.38Å | 1.34Å | |
C6 | C5 | doub | 1.41Å | 1.41Å | Aromatic |
C6 | N1 | sing | 1.33Å | 1.35Å | Aromatic |
N7 | C5 | sing | 1.35Å | 1.38Å | Aromatic |
N7 | C8 | doub | 1.30Å | 1.32Å | Aromatic |
C5 | C4 | sing | 1.41Å | 1.39Å | Aromatic |
N1 | C2 | doub | 1.32Å | 1.34Å | Aromatic |
C8 | N9 | sing | 1.36Å | 1.37Å | Aromatic |
C4 | N9 | sing | 1.37Å | 1.38Å | Aromatic |
C4 | N3 | doub | 1.33Å | 1.33Å | Aromatic |
C2 | N3 | sing | 1.32Å | 1.34Å | Aromatic |
N9 | C1' | sing | 1.46Å | 1.47Å | |
C7' | N8' | sing | 1.46Å | 1.45Å | |
C7' | C6' | sing | 1.51Å | 1.50Å | |
C1' | C2' | sing | 1.54Å | 1.53Å | |
C1' | O4' | sing | 1.44Å | 1.42Å | |
C2' | O2' | sing | 1.43Å | 1.43Å | |
C2' | C3' | sing | 1.55Å | 1.53Å | |
C5' | C6' | doub | 1.31Å | 1.31Å | |
C5' | C4' | sing | 1.51Å | 1.49Å | |
N8' | C9' | sing | 1.37Å | 1.32Å | |
O4' | C4' | sing | 1.44Å | 1.44Å | |
C4' | C3' | sing | 1.54Å | 1.53Å | |
C9' | N10 | doub | 1.33Å | 1.32Å | |
C9' | N11 | sing | 1.33Å | 1.32Å | |
C3' | O3' | sing | 1.43Å | 1.42Å | |
C6' | H1 | sing | 1.08Å | 1.08Å | |
C5' | H2 | sing | 1.08Å | 1.08Å | |
C4' | H3 | sing | 1.09Å | 1.10Å | |
C3' | H4 | sing | 1.09Å | 1.10Å | |
O3' | H5 | sing | 0.97Å | 0.95Å | |
C2' | H6 | sing | 1.09Å | 1.10Å | |
O2' | H7 | sing | 0.97Å | 0.95Å | |
C1' | H8 | sing | 1.09Å | 1.10Å | |
C8 | H9 | sing | 1.08Å | 1.08Å | |
N6 | H11 | sing | 0.97Å | 1.00Å | |
N6 | H10 | sing | 0.97Å | 1.00Å | |
C2 | H12 | sing | 1.08Å | 1.08Å | |
C7' | H13 | sing | 1.09Å | 1.10Å | |
C7' | H14 | sing | 1.09Å | 1.10Å | |
N8' | H15 | sing | 0.97Å | 1.00Å | |
N10 | H16 | sing | 0.97Å | 1.00Å | |
N11 | H18 | sing | 0.97Å | 1.00Å | |
N11 | H17 | sing | 0.97Å | 1.00Å | |
N10 | H19 | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N6 | C6 | C5 | 123.6° | 120.8° |
N6 | C6 | N1 | 118.6° | 120.8° |
C6 | N6 | H11 | 109.5° | 120.0° |
C6 | N6 | H10 | 109.5° | 120.0° |
C5 | C6 | N1 | 117.7° | 118.4° |
C6 | C5 | N7 | 132.2° | 134.7° |
C6 | C5 | C4 | 116.6° | 118.2° |
C6 | N1 | C2 | 118.8° | 121.2° |
C5 | N7 | C8 | 103.4° | 109.4° |
N7 | C5 | C4 | 111.2° | 107.2° |
N7 | C8 | N9 | 114.2° | 110.0° |
N7 | C8 | H9 | 122.9° | 125.0° |
C5 | C4 | N9 | 105.2° | 106.0° |
C5 | C4 | N3 | 127.1° | 119.1° |
N1 | C2 | N3 | 128.9° | 122.5° |
N1 | C2 | H12 | 115.6° | 118.8° |
C8 | N9 | C4 | 105.9° | 107.4° |
C8 | N9 | C1' | 127.0° | 126.3° |
N9 | C8 | H9 | 122.9° | 125.0° |
N9 | C4 | N3 | 127.7° | 134.9° |
C4 | N9 | C1' | 127.0° | 126.3° |
C4 | N3 | C2 | 111.0° | 120.6° |
N3 | C2 | H12 | 115.5° | 118.8° |
N9 | C1' | C2' | 115.1° | 110.4° |
N9 | C1' | O4' | 108.4° | 110.4° |
N9 | C1' | H8 | 109.2° | 110.4° |
N8' | C7' | C6' | 109.7° | 109.5° |
C7' | N8' | C9' | 123.6° | 120.0° |
N8' | C7' | H13 | 109.4° | 109.5° |
N8' | C7' | H14 | 109.4° | 109.5° |
C7' | N8' | H15 | 118.2° | 120.0° |
C7' | C6' | C5' | 124.6° | 120.0° |
C7' | C6' | H1 | 117.7° | 120.0° |
C6' | C7' | H13 | 109.4° | 109.5° |
C6' | C7' | H14 | 109.4° | 109.5° |
C2' | C1' | O4' | 105.8° | 104.8° |
C1' | C2' | O2' | 112.4° | 110.5° |
C1' | C2' | C3' | 100.1° | 104.0° |
C1' | C2' | H6 | 110.0° | 110.6° |
C2' | C1' | H8 | 108.4° | 110.4° |
C1' | O4' | C4' | 110.2° | 105.3° |
O4' | C1' | H8 | 109.8° | 110.3° |
O2' | C2' | C3' | 112.5° | 110.5° |
O2' | C2' | H6 | 111.4° | 110.5° |
C2' | O2' | H7 | 109.5° | 114.0° |
C2' | C3' | C4' | 101.4° | 104.1° |
C2' | C3' | O3' | 111.9° | 110.5° |
C2' | C3' | H4 | 110.2° | 110.6° |
C3' | C2' | H6 | 109.9° | 110.5° |
C6' | C5' | C4' | 122.7° | 120.0° |
C5' | C6' | H1 | 117.7° | 120.0° |
C6' | C5' | H2 | 118.6° | 120.0° |
C5' | C4' | O4' | 107.7° | 110.4° |
C5' | C4' | C3' | 113.4° | 110.4° |
C4' | C5' | H2 | 118.6° | 120.0° |
C5' | C4' | H3 | 110.2° | 110.3° |
N8' | C9' | N10 | 120.1° | 120.0° |
N8' | C9' | N11 | 119.7° | 120.0° |
C9' | N8' | H15 | 118.2° | 120.0° |
O4' | C4' | C3' | 104.7° | 104.8° |
O4' | C4' | H3 | 110.9° | 110.4° |
C4' | C3' | O3' | 110.9° | 110.5° |
C3' | C4' | H3 | 109.7° | 110.4° |
C4' | C3' | H4 | 110.2° | 110.5° |
N10 | C9' | N11 | 120.1° | 120.0° |
C9' | N10 | H16 | 120.0° | 120.0° |
C9' | N10 | H19 | 120.0° | 120.0° |
C9' | N11 | H18 | 120.0° | 120.0° |
C9' | N11 | H17 | 120.0° | 120.0° |
O3' | C3' | H4 | 111.9° | 110.5° |
C3' | O3' | H5 | 109.5° | 114.0° |
H11 | N6 | H10 | 109.4° | 119.9° |
H13 | C7' | H14 | 109.5° | 109.4° |
H16 | N10 | H19 | 120.0° | 120.0° |
H18 | N11 | H17 | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N6 | C6 | C5 | N1 | 179.5° | 180.0° |
N6 | C6 | C5 | N7 | 0.7° | 0.1° |
N6 | C6 | C5 | C4 | 179.4° | 179.8° |
N6 | C6 | N1 | C2 | 179.2° | 180.0° |
C6 | N6 | H11 | H10 | 120.0° | 180.0° |
C6 | C5 | N7 | C4 | 179.9° | 179.9° |
C6 | C5 | N7 | C8 | 179.8° | 180.0° |
C5 | C6 | N1 | C2 | 0.3° | 0.0° |
C6 | C5 | C4 | N9 | 179.8° | 179.8° |
C6 | C5 | C4 | N3 | 0.1° | 0.4° |
C5 | C6 | N6 | H11 | 179.4° | 0.1° |
C5 | C6 | N6 | H10 | 59.5° | 180.0° |
N1 | C6 | C5 | N7 | 179.8° | 179.9° |
N1 | C6 | C5 | C4 | 0.1° | 0.2° |
C6 | N1 | C2 | N3 | 0.3° | 0.1° |
N1 | C6 | N6 | H11 | 0.0° | 180.0° |
N1 | C6 | N6 | H10 | 120.0° | 0.0° |
C6 | N1 | C2 | H12 | 179.7° | 180.0° |
C5 | N7 | C8 | N9 | 0.1° | 0.0° |
N7 | C5 | C4 | N9 | 0.3° | 0.3° |
N7 | C5 | C4 | N3 | 180.0° | 179.7° |
C5 | N7 | C8 | H9 | 179.9° | 180.0° |
C8 | N7 | C5 | C4 | 0.2° | 0.2° |
N7 | C8 | N9 | H9 | 180.0° | 180.0° |
N7 | C8 | N9 | C4 | 0.1° | 0.2° |
N7 | C8 | N9 | C1' | 178.2° | 180.0° |
C5 | C4 | N9 | C8 | 0.2° | 0.3° |
C5 | C4 | N9 | N3 | 179.7° | 179.2° |
C5 | C4 | N3 | C2 | 0.1° | 0.5° |
C5 | C4 | N9 | C1' | 178.0° | 179.9° |
N1 | C2 | N3 | C4 | 0.1° | 0.3° |
N1 | C2 | N3 | H12 | 180.0° | 179.9° |
C8 | N9 | C4 | C1' | 178.2° | 179.7° |
C8 | N9 | C4 | N3 | 179.9° | 179.5° |
C8 | N9 | C1' | C2' | 46.4° | 95.0° |
C8 | N9 | C1' | O4' | 71.9° | 20.4° |
C8 | N9 | C1' | H8 | 168.5° | 142.7° |
N9 | C4 | N3 | C2 | 179.7° | 179.6° |
C4 | N9 | C1' | C2' | 135.8° | 84.7° |
C4 | N9 | C1' | O4' | 106.0° | 159.9° |
C4 | N9 | C1' | H8 | 13.6° | 37.6° |
C4 | N9 | C8 | H9 | 179.9° | 179.8° |
N3 | C4 | N9 | C1' | 1.6° | 0.7° |
C4 | N3 | C2 | H12 | 179.9° | 179.8° |
N9 | C1' | C2' | O4' | 119.7° | 118.9° |
N9 | C1' | C2' | H8 | 122.5° | 122.3° |
N9 | C1' | O4' | H8 | 119.2° | 122.3° |
N9 | C1' | C2' | O2' | 85.5° | 98.5° |
N9 | C1' | C2' | C3' | 154.9° | 142.9° |
N9 | C1' | O4' | C4' | 139.0° | 159.3° |
N9 | C1' | C2' | H6 | 39.3° | 24.2° |
C1' | N9 | C8 | H9 | 1.8° | 0.0° |
N8' | C7' | C6' | H13 | 120.0° | 120.0° |
N8' | C7' | C6' | H14 | 120.0° | 120.0° |
N8' | C7' | C6' | C5' | 113.8° | 124.7° |
C7' | N8' | C9' | H15 | 180.0° | 180.0° |
C7' | N8' | C9' | N10 | 2.7° | 0.0° |
C7' | N8' | C9' | N11 | 178.8° | 180.0° |
N8' | C7' | C6' | H1 | 66.2° | 54.9° |
N8' | C7' | H13 | H14 | 119.9° | 120.0° |
C7' | C6' | C5' | H1 | 180.0° | 179.7° |
C7' | C6' | C5' | C4' | 179.0° | 179.7° |
C6' | C7' | N8' | C9' | 84.9° | 180.0° |
C7' | C6' | C5' | H2 | 1.0° | 0.2° |
C6' | C7' | H13 | H14 | 119.9° | 120.0° |
C6' | C7' | N8' | H15 | 95.2° | 0.0° |
C2' | C1' | O4' | H8 | 116.8° | 118.8° |
C1' | C2' | O2' | C3' | 112.1° | 114.6° |
C1' | C2' | O2' | H6 | 124.0° | 122.8° |
C1' | C2' | C3' | H6 | 115.7° | 118.8° |
C2' | C1' | O4' | C4' | 15.0° | 40.5° |
C1' | C2' | C3' | C4' | 41.0° | 0.0° |
C1' | C2' | C3' | O3' | 77.2° | 118.6° |
C1' | C2' | C3' | H4 | 157.7° | 118.7° |
C1' | C2' | O2' | H7 | 180.0° | 176.0° |
O4' | C1' | C2' | O2' | 154.8° | 142.6° |
O4' | C1' | C2' | C3' | 35.2° | 24.0° |
C1' | O4' | C4' | C5' | 109.0° | 159.3° |
C1' | O4' | C4' | C3' | 11.9° | 40.5° |
C1' | O4' | C4' | H3 | 130.2° | 78.4° |
O4' | C1' | C2' | H6 | 80.4° | 94.7° |
O2' | C2' | C3' | H6 | 124.8° | 122.6° |
O2' | C2' | C3' | C4' | 160.5° | 118.6° |
O2' | C2' | C3' | O3' | 42.3° | 0.0° |
O2' | C2' | C3' | H4 | 82.8° | 122.7° |
O2' | C2' | C1' | H8 | 37.0° | 23.8° |
C2' | C3' | C4' | C5' | 83.6° | 142.8° |
C2' | C3' | C4' | O4' | 33.6° | 23.9° |
C2' | C3' | C4' | O3' | 118.9° | 118.7° |
C2' | C3' | C4' | H4 | 116.7° | 118.7° |
C2' | C3' | O3' | H4 | 124.2° | 122.7° |
C2' | C3' | C4' | H3 | 152.7° | 95.0° |
C2' | C3' | O3' | H5 | 180.0° | 176.1° |
C3' | C2' | O2' | H7 | 67.9° | 61.4° |
C3' | C2' | C1' | H8 | 82.6° | 94.8° |
C6' | C5' | C4' | H2 | 180.0° | 179.9° |
C6' | C5' | C4' | O4' | 117.3° | 9.6° |
C6' | C5' | C4' | C3' | 127.3° | 125.0° |
C6' | C5' | C4' | H3 | 3.9° | 112.7° |
C5' | C6' | C7' | H13 | 126.2° | 115.2° |
C5' | C6' | C7' | H14 | 6.2° | 4.7° |
C5' | C4' | O4' | C3' | 121.0° | 118.9° |
C5' | C4' | O4' | H3 | 120.7° | 122.2° |
C5' | C4' | C3' | H3 | 123.7° | 122.2° |
C5' | C4' | C3' | O3' | 157.5° | 98.5° |
C4' | C5' | C6' | H1 | 1.0° | 0.0° |
C5' | C4' | C3' | H4 | 33.1° | 24.0° |
N8' | C9' | N10 | N11 | 178.5° | 180.0° |
C9' | N8' | C7' | H13 | 35.2° | 60.0° |
C9' | N8' | C7' | H14 | 155.1° | 59.9° |
N8' | C9' | N10 | H16 | 178.5° | 0.0° |
N8' | C9' | N11 | H18 | 178.5° | 0.0° |
N8' | C9' | N11 | H17 | 1.4° | 180.0° |
N8' | C9' | N10 | H19 | 1.5° | 180.0° |
O4' | C4' | C3' | H3 | 119.1° | 118.9° |
O4' | C4' | C3' | O3' | 85.4° | 142.6° |
O4' | C4' | C5' | H2 | 62.7° | 170.4° |
O4' | C4' | C3' | H4 | 150.2° | 94.8° |
C4' | O4' | C1' | H8 | 101.8° | 78.3° |
C4' | C3' | O3' | H4 | 123.5° | 122.6° |
C3' | C4' | C5' | H2 | 52.7° | 54.9° |
C4' | C3' | O3' | H5 | 67.6° | 61.4° |
C4' | C3' | C2' | H6 | 74.7° | 118.8° |
N10 | C9' | N8' | H15 | 177.3° | 180.0° |
C9' | N10 | H16 | H19 | 180.0° | 180.0° |
N10 | C9' | N11 | H18 | 0.0° | 180.0° |
N10 | C9' | N11 | H17 | 180.0° | 0.0° |
N11 | C9' | N8' | H15 | 1.2° | 0.0° |
N11 | C9' | N10 | H16 | 0.0° | 180.0° |
C9' | N11 | H18 | H17 | 180.0° | 179.9° |
N11 | C9' | N10 | H19 | 180.0° | 0.0° |
O3' | C3' | C4' | H3 | 33.8° | 23.7° |
O3' | C3' | C2' | H6 | 167.1° | 122.6° |
H1 | C6' | C5' | H2 | 178.9° | 179.9° |
H1 | C6' | C7' | H13 | 53.8° | 65.1° |
H1 | C6' | C7' | H14 | 173.8° | 175.0° |
H2 | C5' | C4' | H3 | 176.1° | 67.3° |
H3 | C4' | C3' | H4 | 90.7° | 146.3° |
H4 | C3' | O3' | H5 | 55.8° | 61.2° |
H4 | C3' | C2' | H6 | 42.0° | 0.1° |
H6 | C2' | O2' | H7 | 56.0° | 61.2° |
H6 | C2' | C1' | H8 | 161.8° | 146.5° |
H13 | C7' | N8' | H15 | 144.8° | 120.0° |
H14 | C7' | N8' | H15 | 24.9° | 120.1° |