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SummaryGeometryRelated PDB entries

6YW

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
O20P17doub1.48Å1.47Å
P17O18sing1.61Å1.46Å
P17O16sing1.61Å1.55Å
P17O19sing1.61Å1.47Å
O16P14sing1.61Å1.57Å
O21P14doub1.48Å1.51Å
P14O15sing1.61Å1.50Å
P14O13sing1.61Å1.58Å
O24P05doub1.48Å1.50Å
O12P11doub1.48Å1.49Å
O01P02doub1.48Å1.48Å
O13P11sing1.61Å1.57Å
O06P05sing1.61Å1.50Å
P11O10sing1.61Å1.56Å
P11O22sing1.61Å1.50Å
O25P02sing1.61Å1.51Å
P05O04sing1.61Å1.56Å
P05O07sing1.61Å1.55Å
O10P08sing1.61Å1.56Å
P02O04sing1.61Å1.55Å
P02O03sing1.61Å1.50Å
O07P08sing1.61Å1.55Å
P08O09doub1.48Å1.51Å
P08O23sing1.61Å1.48Å
O03H1sing0.97Å0.95Å
O06H2sing0.97Å0.95Å
O15H3sing0.97Å0.95Å
O18H4sing0.97Å0.95Å
O19H5sing0.97Å0.95Å
O22H6sing0.97Å0.95Å
O23H7sing0.97Å0.95Å
O25H8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
O20P17O18109.7°109.5°
O20P17O16106.0°109.4°
O20P17O19109.4°109.5°
O18P17O16110.4°109.5°
O18P17O19108.3°109.5°
P17O18H4109.5°114.0°
O16P17O19113.0°109.5°
P17O16P14129.9°134.0°
P17O19H5109.5°114.0°
O16P14O21110.8°109.5°
O16P14O15117.3°109.5°
O16P14O13102.3°109.5°
O21P14O15106.0°109.4°
O21P14O13118.2°109.5°
O15P14O13102.6°109.5°
P14O15H3109.5°114.0°
P14O13P11133.7°134.0°
O24P05O06110.3°109.4°
O24P05O04108.8°109.5°
O24P05O07113.9°109.5°
O12P11O13110.8°109.5°
O12P11O10106.7°109.5°
O12P11O22110.0°109.5°
O01P02O25110.0°109.5°
O01P02O04112.6°109.4°
O01P02O03106.8°109.5°
O13P11O10109.4°109.5°
O13P11O22105.4°109.5°
O06P05O04114.1°109.5°
O06P05O07102.6°109.5°
P05O06H2109.5°114.0°
O10P11O22114.7°109.5°
P11O10P08129.1°134.0°
P11O22H6109.5°114.0°
O25P02O04111.2°109.5°
O25P02O03110.3°109.5°
P02O25H8109.5°114.0°
O04P05O07107.0°109.5°
P05O04P02127.8°134.0°
P05O07P08124.0°134.0°
O10P08O07105.3°109.5°
O10P08O09111.8°109.4°
O10P08O23111.3°109.5°
O04P02O03105.7°109.5°
P02O03H1109.5°114.0°
O07P08O09110.3°109.5°
O07P08O23108.4°109.5°
O09P08O23109.7°109.4°
P08O23H7109.5°113.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
O20P17O18O16116.5°120.0°
O20P17O18O19119.4°120.0°
O20P17O16O19119.9°120.0°
O20P17O16P14148.6°40.0°
O20P17O18H40.0°180.0°
O20P17O19H50.0°60.0°
O18P17O16O19121.4°120.0°
O18P17O16P1429.9°79.9°
O18P17O19H5119.5°60.0°
P17O16P14O21120.3°45.0°
P17O16P14O151.6°74.9°
P17O16P14O13112.9°165.0°
O16P17O18H4116.5°60.1°
O16P17O19H5117.9°180.0°
O19P17O16P1491.6°160.0°
O19P17O18H4119.3°60.0°
O16P14O21O15128.2°120.0°
O16P14O21O13117.5°120.0°
O16P14O15O13111.1°120.0°
O16P14O13P11126.1°160.0°
O16P14O15H3124.4°60.0°
O21P14O15O13124.6°120.0°
O21P14O13P114.2°40.0°
O21P14O15H30.0°180.0°
O15P14O13P11112.0°80.0°
P14O13P11O1289.4°40.0°
P14O13P11O1028.0°160.0°
P14O13P11O22151.7°80.0°
O13P14O15H3124.5°60.0°
O24P05O06O04122.9°120.0°
O24P05O06O07121.7°120.0°
O24P05O04O07123.5°120.0°
O24P05O04P0227.4°40.0°
O24P05O07P0838.7°44.9°
O24P05O06H20.0°179.9°
O12P11O13O10117.4°120.0°
O12P11O13O22118.9°120.0°
O12P11O10O22122.0°120.0°
O12P11O10P08105.1°45.0°
O12P11O22H60.0°180.0°
O01P02O25O04125.5°120.0°
O01P02O25O03117.5°120.0°
O01P02O04P0547.9°45.0°
O01P02O04O03116.2°120.0°
O01P02O03H10.0°60.1°
O01P02O25H80.0°180.0°
O13P11O10O22118.1°120.0°
O13P11O10P08135.0°165.0°
O13P11O22H6119.4°60.0°
O06P05O04O07112.8°120.0°
O06P05O04P0296.3°79.9°
O06P05O07P08158.0°75.0°
P11O10P08O07166.2°160.0°
P11O10P08O0974.0°40.0°
P11O10P08O2349.0°79.9°
O10P11O22H6120.2°60.0°
O22P11O10P0816.9°75.0°
O25P02O04P0576.1°75.0°
O25P02O04O03119.8°120.1°
O25P02O03H1119.6°60.0°
P05O04P02O03164.1°165.0°
O04P05O07P0881.6°164.9°
O04P05O06H2122.9°60.1°
P05O07P08O1081.1°165.0°
O07P05O04P02150.8°160.0°
P05O07P08O0939.6°45.0°
P05O07P08O23159.7°74.9°
O07P05O06H2121.7°60.0°
O10P08O07O09120.7°120.0°
O10P08O07O23119.2°120.1°
O10P08O09O23123.9°120.0°
O10P08O23H7124.2°60.0°
O04P02O03H1120.1°180.0°
O04P02O25H8125.5°60.0°
O03P02O25H8117.5°60.0°
O07P08O09O23119.3°120.0°
O07P08O23H7120.5°60.0°
O09P08O23H70.0°180.0°

248335

PDB entries from 2026-01-28

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