Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YF

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O2sing1.43Å1.44Å
O2C3sing1.36Å1.37Å
C3C4sing1.39Å1.40ÅAromatic
C3C18doub1.39Å1.43ÅAromatic
C4C5doub1.39Å1.41ÅAromatic
C5N6sing1.40Å1.42Å
C5C14sing1.39Å1.40ÅAromatic
N6S7sing1.66Å1.69Å
S7O8doub1.42Å1.44Å
S7O9doub1.42Å1.45Å
S7C10sing1.81Å1.86Å
C10F11sing1.40Å1.42Å
C10F12sing1.40Å1.40Å
C10F13sing1.40Å1.41Å
C14C15doub1.39Å1.38ÅAromatic
C15O16sing1.36Å1.39Å
C15C18sing1.39Å1.43ÅAromatic
O16C17sing1.43Å1.45Å
C18O19sing1.36Å1.39Å
O19C20sing1.36Å1.38Å
C20C21sing1.39Å1.40ÅAromatic
C20C28doub1.39Å1.41ÅAromatic
C21C22doub1.38Å1.38ÅAromatic
C22C23sing1.40Å1.39ÅAromatic
C23C24sing1.43Å1.43Å
C23C26doub1.40Å1.40ÅAromatic
C24N25trip1.14Å1.16Å
C26CLsing1.74Å1.75Å
C26C28sing1.38Å1.39ÅAromatic
C1H11Csing1.09Å1.10Å
C1H12Csing1.09Å1.10Å
C1H13Csing1.09Å1.10Å
C4H4sing1.08Å1.08Å
N6H6sing0.97Å1.00Å
C14H14sing1.08Å1.08Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C17H173sing1.09Å1.10Å
C21H21sing1.08Å1.08Å
C28H28sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1O2C3120.4°117.0°
O2C1H11C109.5°109.5°
O2C1H12C109.5°109.5°
O2C1H13C109.4°109.4°
O2C3C4117.8°120.1°
O2C3C18122.0°120.0°
C4C3C18120.2°119.9°
C3C4C5119.7°120.0°
C3C4H4120.2°119.9°
C3C18C15118.8°120.0°
C3C18O19121.3°120.0°
C4C5N6120.9°120.0°
C4C5C14120.2°120.1°
C5C4H4120.1°120.0°
N6C5C14118.9°120.0°
C5N6S7122.9°120.0°
C5N6H6106.0°119.9°
C5C14C15121.2°120.0°
C5C14H14119.4°120.0°
N6S7O8101.5°104.3°
N6S7O9109.5°104.3°
N6S7C1099.5°104.4°
S7N6H6106.0°120.0°
O8S7O9117.0°121.1°
O8S7C10112.6°110.6°
O9S7C10114.3°110.5°
S7C10F11115.7°109.4°
S7C10F12108.8°109.5°
S7C10F13109.9°109.5°
F11C10F12106.7°109.5°
F11C10F13106.4°109.5°
F12C10F13109.1°109.5°
C14C15O16115.4°120.0°
C14C15C18119.9°120.0°
C15C14H14119.4°120.0°
O16C15C18124.6°120.0°
C15O16C17121.7°117.0°
C15C18O19119.8°120.0°
O16C17H171109.5°109.5°
O16C17H172109.5°109.5°
O16C17H173109.5°109.5°
C18O19C20125.6°118.0°
O19C20C21122.2°119.9°
O19C20C28119.5°119.9°
C21C20C28118.3°120.2°
C20C21C22120.3°120.1°
C20C21H21119.8°120.0°
C20C28C26121.4°120.1°
C20C28H28119.3°119.9°
C21C22C23121.0°119.9°
C22C21H21119.9°119.9°
C21C22H22119.5°120.0°
C22C23C24118.9°120.1°
C22C23C26120.0°119.8°
C23C22H22119.5°120.1°
C24C23C26121.1°120.0°
C23C24N25175.6°179.9°
C23C26CL119.0°120.1°
C23C26C28119.0°119.9°
CLC26C28121.9°120.1°
C26C28H28119.3°120.0°
H11CC1H12C109.5°109.5°
H11CC1H13C109.4°109.4°
H12CC1H13C109.5°109.5°
H171C17H172109.5°109.5°
H171C17H173109.4°109.4°
H172C17H173109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1O2C3C4104.4°0.0°
C1O2C3C1876.4°179.7°
O2C1H11CH12C120.0°120.0°
O2C1H11CH13C120.0°120.0°
O2C1H12CH13C120.0°120.0°
O2C3C4C18179.2°179.7°
O2C3C4C5180.0°180.0°
O2C3C18C15179.3°179.8°
O2C3C18O191.9°0.0°
C3O2C1H11C180.0°60.0°
C3O2C1H12C60.0°60.0°
C3O2C1H13C60.0°180.0°
O2C3C4H40.0°0.1°
C3C4C5H4180.0°179.9°
C3C4C5N6178.1°180.0°
C3C4C5C140.2°0.1°
C4C3C18C151.5°0.5°
C4C3C18O19178.9°179.7°
C18C3C4C50.8°0.3°
C3C18C15C141.3°0.5°
C3C18C15O16179.9°179.8°
C3C18C15O19177.4°179.8°
C3C18O19C20118.7°90.0°
C18C3C4H4179.2°179.8°
C4C5N6C14177.9°179.9°
C4C5N6S7168.8°133.7°
C4C5C14C150.5°0.1°
C4C5N6H669.3°46.3°
C4C5C14H14179.5°180.0°
C5N6S7H6121.9°179.9°
C5N6S7O818.4°54.5°
C5N6S7O9105.9°177.6°
C5N6S7C10133.9°61.6°
N6C5C14C15178.4°180.0°
N6C5C4H41.8°0.1°
N6C5C14H141.6°0.1°
C14C5N6S713.3°46.1°
C5C14C15H14180.0°179.9°
C5C14C15O16179.2°179.9°
C5C14C15C180.3°0.3°
C14C5C4H4179.7°180.0°
C14C5N6H6108.6°133.8°
N6S7O8O9119.1°116.7°
N6S7O8C10105.4°111.7°
N6S7O9C10110.6°111.7°
N6S7C10F11108.2°65.2°
N6S7C10F12131.8°174.8°
N6S7C10F1312.4°54.8°
O8S7O9C10134.7°131.6°
O8S7C10F111.4°46.4°
O8S7C10F12121.5°73.5°
O8S7C10F13119.1°166.4°
O8S7N6H6140.2°125.4°
O9S7C10F11135.3°176.8°
O9S7C10F1215.2°63.3°
O9S7C10F13104.2°56.8°
O9S7N6H615.9°2.5°
S7C10F11F12121.2°119.9°
S7C10F11F13122.4°120.0°
S7C10F12F13119.9°120.0°
C10S7N6H6104.2°118.5°
F11C10F12F13114.6°120.0°
C14C15O16C18178.9°179.8°
C14C15O16C1772.7°0.0°
C14C15C18O19178.7°179.7°
O16C15C18O192.4°0.1°
O16C15C14H140.8°0.0°
C15O16C17H171180.0°180.0°
C15O16C17H17260.0°60.0°
C15O16C17H17360.0°60.0°
C18C15O16C17108.4°179.8°
C15C18O19C2063.9°89.9°
C18C15C14H14179.7°179.8°
O16C17H171H172120.0°120.1°
O16C17H171H173120.0°120.0°
O16C17H172H173120.0°120.0°
C18O19C20C211.1°180.0°
C18O19C20C28179.3°0.2°
O19C20C21C28178.2°179.8°
O19C20C21C22177.9°180.0°
O19C20C28C26178.8°179.7°
O19C20C21H212.1°0.0°
O19C20C28H281.2°0.1°
C20C21C22H21180.0°180.0°
C20C21C22C230.2°0.0°
C21C20C28C260.5°0.5°
C21C20C28H28179.5°179.7°
C20C21C22H22179.8°180.0°
C28C20C21C220.3°0.2°
C20C28C26C231.4°0.5°
C20C28C26CL179.1°179.8°
C20C28C26H28180.0°179.8°
C28C20C21H21179.7°179.8°
C21C22C23H22180.0°179.9°
C21C22C23C24178.2°180.0°
C21C22C23C260.7°0.0°
C22C23C24C26177.5°180.0°
C22C23C24N2580.4°11.4°
C22C23C26CL179.0°180.0°
C22C23C26C281.5°0.3°
C23C22C21H21179.8°180.0°
C24C23C26CL1.6°0.0°
C24C23C26C28178.9°179.7°
C24C23C22H221.8°0.0°
C26C23C24N2597.1°168.6°
C23C26CLC28179.5°179.7°
C23C26C28H28178.6°179.7°
C26C23C22H22179.3°180.0°
CLC26C28H280.9°0.1°
H11CC1H12CH13C120.0°120.0°
H171C17H172H173120.0°119.9°
H21C21C22H220.2°0.1°

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon