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SummaryGeometryRelated PDB entries

6YE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C12C11doub1.35Å1.38ÅAromatic
C12N07sing1.37Å1.40ÅAromatic
C11C10sing1.41Å1.41ÅAromatic
N06N07sing1.40Å1.39ÅAromatic
N06C05doub1.31Å1.37ÅAromatic
N07C08sing1.37Å1.45ÅAromatic
C14C15sing1.53Å1.51Å
C14N13sing1.47Å1.47Å
C05C04sing1.41Å1.43ÅAromatic
C10N13sing1.38Å1.40Å
C10N09doub1.32Å1.39ÅAromatic
C15N16sing1.47Å1.47Å
C08N09sing1.33Å1.36ÅAromatic
C08C04doub1.41Å1.41ÅAromatic
N13C18sing1.47Å1.47Å
C04C02sing1.46Å1.50Å
N16C17sing1.47Å1.46Å
C02O03doub1.22Å1.25Å
C02N01sing1.35Å1.38Å
C18C17sing1.54Å1.50Å
N01C19sing1.40Å1.42Å
O26C24doub1.22Å1.24Å
C19C23doub1.36Å1.44ÅAromatic
C19C20sing1.42Å1.44ÅAromatic
C24C20sing1.48Å1.47Å
C24N25sing1.35Å1.33Å
C23N22sing1.36Å1.34ÅAromatic
C20N21doub1.32Å1.34ÅAromatic
N22N21sing1.28Å1.35ÅAromatic
N22C27sing1.47Å1.46Å
N01H1sing0.97Å1.00Å
C05H2sing1.08Å1.08Å
C11H3sing1.08Å1.08Å
C12H4sing1.08Å1.08Å
C14H5sing1.09Å1.10Å
C14H6sing1.09Å1.10Å
C15H7sing1.09Å1.10Å
C15H8sing1.09Å1.10Å
N16H9sing1.01Å1.00Å
C17H11sing1.09Å1.10Å
C17H12sing1.09Å1.10Å
C18H13sing1.09Å1.10Å
C18H14sing1.09Å1.10Å
C23H15sing1.08Å1.08Å
N25H16sing0.97Å1.00Å
N25H17sing0.97Å1.00Å
C27H18sing1.09Å1.10Å
C27H19sing1.09Å1.10Å
C27H20sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C11C12N07118.4°119.3°
C12C11C10121.5°119.3°
C12C11H3119.2°120.3°
C11C12H4120.8°120.4°
C12N07N06129.6°132.0°
C12N07C08119.4°119.8°
N07C12H4120.8°120.3°
C11C10N13121.9°120.1°
C11C10N09120.8°119.9°
C10C11H3119.2°120.3°
N07N06C05104.7°109.5°
N06N07C08111.0°108.2°
N06C05C04113.3°108.8°
N06C05H2123.3°125.6°
N07C08N09120.9°120.9°
N07C08C04106.1°106.7°
C15C14N13114.8°108.5°
C14C15N16108.0°109.3°
C15C14H5108.2°109.6°
C15C14H6108.1°109.7°
C14C15H7109.8°109.5°
C14C15H8109.8°109.5°
C14N13C10121.3°120.9°
C14N13C18111.0°118.2°
N13C14H5108.1°109.6°
N13C14H6108.1°109.7°
C05C04C08104.8°106.9°
C05C04C02122.8°126.6°
C04C05H2123.3°125.6°
N13C10N09117.1°120.1°
C10N13C18117.9°120.9°
C10N09C08118.9°120.8°
C15N16C17109.2°111.2°
N16C15H7109.8°109.5°
N16C15H8109.8°109.4°
C15N16H9109.5°111.0°
N09C08C04133.0°132.4°
C08C04C02132.3°126.6°
N13C18C17114.8°108.3°
N13C18H13108.2°109.6°
N13C18H14108.1°109.6°
C04C02O03120.5°120.0°
C04C02N01115.4°120.0°
N16C17C18106.4°109.2°
C17N16H9109.5°111.0°
N16C17H11110.3°109.5°
N16C17H12110.3°109.5°
O03C02N01123.9°120.0°
C02N01C19123.8°120.0°
C02N01H1118.1°120.1°
C18C17H11110.3°109.7°
C18C17H12110.3°109.4°
C17C18H13108.1°109.9°
C17C18H14108.1°109.7°
N01C19C23129.4°127.3°
N01C19C20126.3°127.3°
C19N01H1118.1°120.0°
O26C24C20120.4°119.9°
O26C24N25122.5°120.0°
C23C19C20104.2°105.4°
C19C23N22106.1°107.1°
C19C23H15127.0°126.4°
C19C20C24127.0°126.5°
C19C20N21109.3°107.0°
C20C24N25117.1°120.0°
C24C20N21123.7°126.5°
C24N25H16120.0°120.0°
C24N25H17120.0°120.0°
C23N22N21112.9°110.2°
C23N22C27127.6°124.9°
N22C23H15127.0°126.5°
C20N21N22107.5°110.2°
N21N22C27119.5°124.8°
N22C27H18109.5°109.4°
N22C27H19109.5°109.5°
N22C27H20109.5°109.5°
H5C14H6109.5°109.8°
H7C15H8109.5°109.5°
H11C17H12109.4°109.6°
H13C18H14109.5°109.8°
H16N25H17120.0°119.9°
H18C27H19109.5°109.4°
H18C27H20109.5°109.5°
H19C27H20109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C11C12N07H4180.0°179.6°
C12C11C10H3180.0°179.8°
C11C12N07N06178.0°179.8°
C11C12N07C080.6°0.4°
C12C11C10N13176.4°179.8°
C12C11C10N092.3°0.2°
N07C12C11C101.2°0.4°
C12N07N06C08178.7°179.8°
C12N07N06C05179.9°180.0°
C12N07C08N091.0°0.2°
C12N07C08C04179.8°179.8°
N07C12C11H3178.8°179.8°
C11C10N13C145.3°5.3°
C11C10N13N09174.3°180.0°
C11C10N09C082.6°0.1°
C11C10N13C18137.6°174.4°
C10C11C12H4178.8°180.0°
N07N06C05C040.6°0.0°
N06N07C08N09177.9°180.0°
N06N07C08C041.4°0.4°
N07N06C05H2179.4°180.0°
N06N07C12H42.0°0.2°
C05N06N07C081.2°0.2°
N06C05C04H2180.0°179.9°
N06C05C04C080.3°0.3°
N06C05C04C02177.6°180.0°
N07C08C04C051.0°0.4°
N07C08N09C102.0°0.1°
N07C08N09C04179.0°179.5°
N07C08C04C02177.9°179.9°
C08N07C12H4179.4°180.0°
C15C14N13H5120.8°119.7°
C15C14N13H6120.8°119.8°
C15C14N13C10170.4°128.8°
C14C15N16H7119.8°120.0°
C14C15N16H8119.8°120.0°
C15C14N13C1844.3°51.5°
C14C15N16C1764.6°63.2°
C15C14H5H6117.6°120.5°
C14C15H7H8120.7°120.1°
C14C15N16H955.4°172.7°
C14N13C10C18143.0°179.7°
C14N13C10N09179.6°174.8°
N13C14C15N1653.2°53.9°
C14N13C18C1747.3°51.6°
N13C14H5H6117.6°120.5°
N13C14C15H7173.0°66.1°
N13C14C15H866.5°173.8°
C14N13C18H13168.1°68.3°
C14N13C18H1473.4°171.2°
C05C04C08N09178.2°180.0°
C05C04C08C02177.0°179.7°
C05C04C02O038.6°180.0°
C05C04C02N01174.2°0.1°
N13C10N09C08177.0°180.0°
C10N13C18C17166.1°128.7°
N13C10C11H33.6°0.0°
C10N13C14H549.6°9.2°
C10N13C14H668.8°111.4°
C10N13C18H1345.3°111.4°
C10N13C18H1473.1°9.1°
C10N09C08C04179.0°179.4°
N09C10N13C1836.6°5.5°
N09C10C11H3177.7°180.0°
C15N16C17H9119.9°124.1°
C15N16C17C1866.6°63.3°
N16C15C14H5174.0°173.5°
N16C15C14H667.5°65.9°
N16C15H7H8120.7°120.0°
C15N16C17H11173.9°56.8°
C15N16C17H1253.0°176.9°
N09C08C04C021.2°0.3°
C08C04C02O03167.9°0.3°
C08C04C02N019.3°179.7°
C08C04C05H2179.7°179.8°
N13C18C17N1658.3°54.1°
N13C18C17H13120.8°119.7°
N13C18C17H14120.8°119.6°
C18N13C14H5165.1°171.2°
C18N13C14H676.4°68.3°
N13C18C17H11177.9°65.9°
N13C18C17H1261.2°173.9°
N13C18H13H14117.6°120.4°
C04C02O03N01177.0°179.9°
C04C02N01C19162.7°180.0°
C04C02N01H117.3°0.3°
C02C04C05H22.4°0.1°
N16C17C18H11119.5°120.0°
N16C17C18H12119.5°119.8°
C17N16C15H7175.7°56.9°
C17N16C15H855.2°176.9°
N16C17H11H12121.4°120.1°
N16C17C18H13179.1°65.6°
N16C17C18H1462.5°173.7°
O03C02N01C1914.4°0.0°
O03C02N01H1165.6°179.8°
C02N01C19H1180.0°179.7°
C02N01C19C2315.3°0.3°
C02N01C19C20166.7°180.0°
C18C17N16H953.4°172.6°
C18C17H11H12121.4°120.1°
C17C18H13H14117.6°120.7°
N01C19C23C20178.3°179.7°
N01C19C20C241.7°0.0°
N01C19C23N22178.7°179.8°
N01C19C20N21178.4°180.0°
N01C19C23H151.3°0.1°
O26C24C20C1910.9°0.0°
O26C24C20N25179.9°179.9°
O26C24C20N21169.2°180.0°
O26C24N25H160.0°180.0°
O26C24N25H17180.0°0.0°
C23C19C20C24180.0°179.7°
C19C23N22H15180.0°179.8°
C23C19C20N210.0°0.3°
C19C23N22N210.7°0.5°
C19C23N22C27179.8°179.8°
C23C19N01H1164.7°179.9°
C19C20C24N21180.0°180.0°
C19C20C24N25169.2°180.0°
C20C19C23N220.4°0.5°
C19C20N21N220.4°0.0°
C20C19N01H113.3°0.3°
C20C19C23H15179.6°179.8°
C24C20N21N22179.6°180.0°
C20C24N25H16179.9°0.1°
C20C24N25H170.1°179.9°
N25C24C20N2110.8°0.0°
C24N25H16H17180.0°180.0°
C23N22N21C200.7°0.3°
C23N22N21C27179.6°179.8°
C23N22C27H18179.5°89.7°
C23N22C27H1959.5°30.3°
C23N22C27H2060.5°150.3°
C20N21N22C27179.7°179.9°
N21N22C23H15179.3°179.8°
N21N22C27H180.0°90.1°
N21N22C27H19120.0°150.0°
N21N22C27H20120.0°29.9°
C27N22C23H150.2°0.0°
N22C27H18H19120.0°120.0°
N22C27H18H20120.0°120.0°
N22C27H19H20120.0°120.1°
H3C11C12H41.2°0.1°
H5C14C15H766.2°53.5°
H5C14C15H854.2°66.5°
H6C14C15H752.2°174.1°
H6C14C15H8172.7°54.0°
H7C15N16H964.4°67.2°
H8C15N16H9175.2°52.8°
H9N16C17H1166.2°67.3°
H9N16C17H12172.9°52.8°
H11C17C18H1361.4°174.5°
H11C17C18H1457.1°53.7°
H12C17C18H1359.6°54.3°
H12C17C18H14178.0°66.5°
H18C27H19H20120.0°120.0°

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PDB entries from 2024-07-17

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