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6Y5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2F1sing1.40Å1.38Å
C2C3sing1.53Å1.53Å
O10C5doub1.21Å1.23Å
C3C4sing1.53Å1.54Å
C5C4sing1.51Å1.52Å
C5C6sing1.49Å1.46Å
O8C6doub1.21Å1.25Å
C6O7sing1.35Å1.25Å
O7H1sing0.97Å0.95Å
C4H2sing1.09Å1.10Å
C4H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C2H6sing1.09Å1.10Å
C2H7sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
F1C2C3110.5°109.4°
F1C2H6109.2°109.4°
F1C2H7109.2°109.4°
C2C3C4108.2°109.5°
C2C3H4109.8°109.5°
C2C3H5109.8°109.5°
C3C2H6109.2°109.5°
C3C2H7109.2°109.5°
O10C5C4123.2°120.0°
O10C5C6119.6°120.0°
C3C4C5116.0°109.5°
C3C4H2107.8°109.5°
C3C4H3107.8°109.5°
C4C3H4109.8°109.5°
C4C3H5109.8°109.5°
C4C5C6117.2°120.0°
C5C4H2107.8°109.5°
C5C4H3107.8°109.5°
C5C6O8119.4°120.0°
C5C6O7118.3°120.0°
O8C6O7122.2°120.0°
C6O7H1109.5°117.0°
H2C4H3109.5°109.4°
H4C3H5109.5°109.4°
H6C2H7109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
F1C2C3H6120.1°119.9°
F1C2C3H7120.1°120.0°
F1C2C3C466.7°180.0°
F1C2C3H4173.5°60.0°
F1C2C3H553.1°60.0°
F1C2H6H7119.5°120.0°
C2C3C4H4119.8°120.0°
C2C3C4H5119.8°120.0°
C2C3C4C579.3°180.0°
C2C3C4H2159.7°59.9°
C2C3C4H341.6°60.0°
C2C3H4H5120.6°120.0°
C3C2H6H7119.6°120.1°
O10C5C4C320.8°0.0°
O10C5C4C6179.7°179.7°
O10C5C6O829.3°180.0°
O10C5C6O7153.4°0.0°
O10C5C4H2141.7°120.0°
O10C5C4H3100.2°120.0°
C3C4C5H2121.0°120.1°
C3C4C5H3121.0°120.0°
C3C4C5C6158.9°179.7°
C3C4H2H3117.1°120.0°
C4C3H4H5120.6°120.0°
C4C3C2H653.4°60.0°
C4C3C2H7173.2°60.1°
C4C5C6O8150.4°0.3°
C4C5C6O726.9°179.7°
C5C4H2H3117.0°120.0°
C5C4C3H440.5°60.0°
C5C4C3H5160.9°60.0°
C5C6O8O7177.1°180.0°
C5C6O7H1177.2°180.0°
C6C5C4H238.0°60.3°
C6C5C4H380.1°59.7°
O8C6O7H10.0°0.0°
H2C4C3H480.5°180.0°
H2C4C3H539.9°60.0°
H3C4C3H4161.4°60.0°
H3C4C3H578.2°180.0°
H4C3C2H666.4°179.9°
H4C3C2H753.3°60.0°
H5C3C2H6173.2°60.0°
H5C3C2H767.0°180.0°

248942

PDB entries from 2026-02-11

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