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Summary Geometry Related PDB entries

6X7

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O05	C04	doub	1.22Å	1.26Å
C01	C02	sing	1.51Å	1.53Å
C04	C03	sing	1.47Å	1.54Å
C02	C03	doub	1.40Å	1.40Å	Aromatic
C02	C10	sing	1.38Å	1.39Å	Aromatic
C03	C07	sing	1.40Å	1.40Å	Aromatic
C10	C09	doub	1.39Å	1.38Å	Aromatic
C07	O12	sing	1.36Å	1.41Å
C07	C08	doub	1.38Å	1.39Å	Aromatic
C09	C08	sing	1.39Å	1.38Å	Aromatic
C09	O11	sing	1.36Å	1.40Å
C04	O1	sing	1.35Å	1.43Å
C10	H1	sing	1.08Å	1.08Å
O12	H2	sing	0.97Å	0.95Å
C01	H3	sing	1.09Å	1.10Å
C01	H4	sing	1.09Å	1.10Å
C01	H5	sing	1.09Å	1.10Å
C08	H6	sing	1.08Å	1.08Å
O11	H7	sing	0.97Å	0.95Å
O1	H8	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O05	C04	C03	126.6°	120.0°
O05	C04	O1	117.5°	120.0°
C01	C02	C03	122.7°	120.0°
C01	C02	C10	117.1°	120.0°
C02	C01	H3	109.5°	109.5°
C02	C01	H4	109.5°	109.5°
C02	C01	H5	109.4°	109.4°
C04	C03	C02	123.2°	120.2°
C04	C03	C07	118.0°	120.1°
C03	C04	O1	115.9°	120.0°
C03	C02	C10	120.1°	120.0°
C02	C03	C07	118.8°	119.7°
C02	C10	C09	120.2°	120.2°
C02	C10	H1	119.9°	119.9°
C03	C07	O12	121.3°	120.1°
C03	C07	C08	120.7°	119.8°
C10	C09	C08	120.4°	120.3°
C10	C09	O11	120.0°	119.9°
C09	C10	H1	119.9°	119.9°
O12	C07	C08	117.9°	120.1°
C07	O12	H2	109.5°	114.0°
C07	C08	C09	119.8°	120.0°
C07	C08	H6	120.1°	120.0°
C08	C09	O11	119.6°	119.8°
C09	C08	H6	120.1°	120.0°
C09	O11	H7	109.5°	114.0°
C04	O1	H8	109.5°	117.0°
H3	C01	H4	109.4°	109.5°
H3	C01	H5	109.5°	109.5°
H4	C01	H5	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O05	C04	C03	O1	179.1°	180.0°
O05	C04	C03	C02	0.1°	90.0°
O05	C04	C03	C07	179.9°	89.9°
O05	C04	O1	H8	0.0°	0.0°
C01	C02	C03	C04	0.0°	0.0°
C01	C02	C03	C10	180.0°	179.9°
C01	C02	C03	C07	179.9°	179.9°
C01	C02	C10	C09	179.9°	180.0°
C01	C02	C10	H1	0.1°	0.1°
C02	C01	H3	H4	120.0°	120.0°
C02	C01	H3	H5	120.0°	120.0°
C02	C01	H4	H5	120.0°	120.0°
C04	C03	C02	C07	179.9°	179.9°
C04	C03	C02	C10	180.0°	179.9°
C04	C03	C07	O12	0.1°	0.1°
C04	C03	C07	C08	179.9°	180.0°
C03	C04	O1	H8	179.2°	180.0°
C03	C02	C10	C09	0.1°	0.1°
C02	C03	C07	O12	179.8°	180.0°
C02	C03	C07	C08	0.1°	0.0°
C02	C03	C04	O1	179.0°	90.0°
C03	C02	C10	H1	179.9°	179.7°
C03	C02	C01	H3	90.0°	90.0°
C03	C02	C01	H4	150.0°	150.0°
C03	C02	C01	H5	30.0°	30.0°
C10	C02	C03	C07	0.1°	0.0°
C02	C10	C09	H1	180.0°	179.8°
C02	C10	C09	C08	0.0°	0.1°
C02	C10	C09	O11	179.9°	179.8°
C10	C02	C01	H3	90.0°	90.1°
C10	C02	C01	H4	30.0°	29.9°
C10	C02	C01	H5	150.0°	149.9°
C03	C07	O12	C08	179.8°	179.9°
C03	C07	C08	C09	0.0°	0.0°
C07	C03	C04	O1	0.8°	90.1°
C03	C07	O12	H2	180.0°	90.1°
C03	C07	C08	H6	180.0°	179.9°
C10	C09	C08	C07	0.0°	0.0°
C10	C09	C08	O11	179.9°	179.7°
C10	C09	C08	H6	180.0°	180.0°
C10	C09	O11	H7	180.0°	90.0°
O12	C07	C08	C09	179.9°	179.9°
O12	C07	C08	H6	0.2°	0.0°
C07	C08	C09	H6	180.0°	179.9°
C07	C08	C09	O11	180.0°	179.7°
C08	C07	O12	H2	0.2°	90.0°
C08	C09	C10	H1	180.0°	179.7°
C08	C09	O11	H7	0.1°	90.3°
O11	C09	C10	H1	0.1°	0.1°
O11	C09	C08	H6	0.0°	0.4°
H3	C01	H4	H5	120.0°	120.0°

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