Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6VM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C12C11sing1.53Å1.51Å
C13C11sing1.53Å1.53Å
C14C11sing1.53Å1.53Å
C14C7sing1.51Å1.51Å
C11C10sing1.53Å1.53Å
N2C7sing1.37Å1.33Å
N2C6sing1.40Å1.32Å
C7C8doub1.35Å1.50Å
C10C9sing1.50Å1.53Å
N1C6doub1.30Å1.34ÅAromatic
N1Nsing1.40Å1.41ÅAromatic
C6C23sing1.41Å1.46ÅAromatic
C8C9sing1.41Å1.51Å
C8C15sing1.51Å1.50Å
C9Odoub1.22Å1.23Å
NC5sing1.35Å1.34ÅAromatic
C23C15sing1.50Å1.51Å
C23C5doub1.34Å1.48ÅAromatic
C15C29sing1.53Å1.53Å
C15C30sing1.51Å1.52Å
C5C4sing1.51Å1.49Å
C28C30doub1.38Å1.40ÅAromatic
C28C27sing1.38Å1.41ÅAromatic
C30C24sing1.38Å1.40ÅAromatic
C4C1sing1.53Å1.53Å
C27C26doub1.38Å1.40ÅAromatic
C3C1sing1.53Å1.53Å
C24C25doub1.38Å1.41ÅAromatic
C1C2sing1.53Å1.52Å
C1Csing1.53Å1.53Å
C26C25sing1.38Å1.40ÅAromatic
C2H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
C3H6sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
C12H9sing1.09Å1.10Å
C12H10sing1.09Å1.10Å
C12H11sing1.09Å1.10Å
C13H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H14sing1.09Å1.10Å
C14H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
C24H17sing1.08Å1.08Å
C25H18sing1.08Å1.08Å
C26H19sing1.08Å1.08Å
C27H20sing1.08Å1.08Å
C10H22sing1.09Å1.10Å
C10H23sing1.09Å1.10Å
C29H24sing1.09Å1.10Å
C29H25sing1.09Å1.10Å
C29H26sing1.09Å1.10Å
C28H27sing1.08Å1.08Å
CH28sing1.09Å1.10Å
CH29sing1.09Å1.10Å
CH30sing1.09Å1.10Å
NH31sing0.97Å1.00Å
N2H21sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12C11C13105.4°109.8°
C12C11C14104.2°109.7°
C12C11C10113.2°109.7°
C11C12H9109.5°109.5°
C11C12H10109.5°109.5°
C11C12H11109.5°109.4°
C13C11C14113.3°109.7°
C13C11C10111.2°109.8°
C11C13H12109.5°109.5°
C11C13H13109.5°109.5°
C11C13H14109.5°109.5°
C11C14C7110.4°109.7°
C14C11C10109.4°108.2°
C11C14H15109.2°109.4°
C11C14H16109.2°109.4°
C14C7N2117.6°116.4°
C14C7C8120.1°120.7°
C7C14H15109.2°109.4°
C7C14H16109.3°109.5°
C11C10C9111.8°108.9°
C11C10H22108.9°109.6°
C11C10H23108.9°109.6°
C7N2C6121.5°118.5°
N2C7C8122.4°123.0°
C7N2H21119.2°120.7°
N2C6N1126.9°131.1°
N2C6C23121.8°120.7°
C6N2H21119.2°120.8°
C7C8C9117.6°120.8°
C7C8C15121.6°123.0°
C10C9C8119.5°121.7°
C10C9O122.4°119.2°
C9C10H22108.9°109.6°
C9C10H23108.9°109.5°
C6N1N104.7°108.0°
N1C6C23111.3°108.2°
N1NC5115.4°108.2°
N1NH31122.3°125.9°
C6C23C15123.4°121.9°
C6C23C5104.5°107.9°
C9C8C15120.7°116.2°
C8C9O118.0°119.2°
C8C15C23109.3°109.8°
C8C15C29105.8°109.4°
C8C15C30106.8°109.4°
NC5C23104.1°107.7°
NC5C4128.6°126.2°
C5NH31122.3°125.9°
C15C23C5132.1°130.2°
C23C15C29109.1°109.4°
C23C15C30106.8°109.4°
C23C5C4127.3°126.1°
C29C15C30118.9°109.4°
C15C29H24109.5°109.5°
C15C29H25109.4°109.5°
C15C29H26109.5°109.5°
C15C30C28119.3°120.0°
C15C30C24123.8°120.0°
C5C4C1114.5°109.4°
C5C4H7108.2°109.5°
C5C4H8108.2°109.5°
C30C28C27120.9°120.0°
C28C30C24116.9°120.0°
C30C28H27119.6°120.0°
C28C27C26121.9°120.0°
C28C27H20119.1°120.0°
C27C28H27119.6°120.0°
C30C24C25122.4°120.0°
C30C24H17118.8°120.0°
C4C1C3111.4°109.4°
C4C1C2113.1°109.5°
C4C1C107.5°109.4°
C1C4H7108.2°109.5°
C1C4H8108.2°109.5°
C27C26C25117.5°120.0°
C27C26H19121.3°120.0°
C26C27H20119.0°120.0°
C3C1C2107.5°109.5°
C3C1C109.9°109.5°
C1C3H4109.5°109.5°
C1C3H5109.5°109.5°
C1C3H6109.4°109.5°
C24C25C26120.4°119.9°
C25C24H17118.8°119.9°
C24C25H18119.8°120.0°
C2C1C107.4°109.5°
C1C2H1109.5°109.5°
C1C2H2109.5°109.5°
C1C2H3109.4°109.5°
C1CH28109.5°109.5°
C1CH29109.5°109.5°
C1CH30109.5°109.5°
C26C25H18119.8°120.0°
C25C26H19121.2°120.0°
H1C2H2109.5°109.4°
H1C2H3109.4°109.5°
H2C2H3109.5°109.4°
H4C3H5109.5°109.5°
H4C3H6109.5°109.4°
H5C3H6109.4°109.5°
H7C4H8109.4°109.5°
H9C12H10109.4°109.5°
H9C12H11109.5°109.4°
H10C12H11109.5°109.5°
H12C13H13109.5°109.5°
H12C13H14109.5°109.4°
H13C13H14109.4°109.5°
H15C14H16109.5°109.4°
H22C10H23109.5°109.6°
H24C29H25109.5°109.4°
H24C29H26109.5°109.4°
H25C29H26109.4°109.5°
H28CH29109.4°109.5°
H28CH30109.5°109.4°
H29CH30109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C12C11C13C14113.4°120.6°
C12C11C13C10123.0°120.6°
C12C11C14C10121.3°119.7°
C12C11C14C7177.1°178.6°
C12C11C10C9173.2°176.2°
C11C12H9H10120.0°120.1°
C11C12H9H11120.0°119.9°
C11C12H10H11120.0°120.0°
C12C11C13H12180.0°60.0°
C12C11C13H1360.0°180.0°
C12C11C13H1460.0°60.0°
C12C11C14H1562.8°61.3°
C12C11C14H1656.9°58.5°
C12C11C10H2266.4°56.4°
C12C11C10H2352.9°64.0°
C13C11C14C10124.6°119.7°
C13C11C14C763.0°60.8°
C13C11C10C968.4°63.1°
C13C11C12H9180.0°59.9°
C13C11C12H1060.0°180.0°
C13C11C12H1160.0°60.0°
C11C13H12H13120.0°120.0°
C11C13H12H14120.0°120.0°
C11C13H13H14120.0°120.0°
C13C11C14H15176.8°59.3°
C13C11C14H1657.1°179.1°
C13C11C10H2252.0°177.0°
C13C11C10H23171.2°56.7°
C11C14C7H15120.1°120.1°
C11C14C7H16120.1°120.1°
C11C14C7N2148.6°148.1°
C11C14C7C831.3°31.7°
C14C11C10C957.5°56.6°
C14C11C12H960.4°60.7°
C14C11C12H10179.6°59.4°
C14C11C12H1159.6°179.4°
C14C11C13H1266.6°179.4°
C14C11C13H1353.4°59.4°
C14C11C13H14173.3°60.7°
C11C14H15H16119.6°119.8°
C14C11C10H22177.8°63.3°
C14C11C10H2362.9°176.3°
C7C14C11C1061.6°58.9°
C14C7N2C8179.9°179.9°
C14C7N2C6179.8°166.1°
C14C7C8C93.2°1.1°
C14C7C8C15178.7°178.5°
C7C14H15H16119.6°119.9°
C14C7N2H210.2°13.9°
C11C10C9H22120.3°119.9°
C11C10C9H23120.4°119.8°
C11C10C9C822.8°28.0°
C11C10C9O161.6°152.1°
C10C11C12H958.3°179.4°
C10C11C12H1061.7°59.3°
C10C11C12H11178.3°60.7°
C10C11C13H1257.0°60.7°
C10C11C13H13177.1°59.4°
C10C11C13H1463.0°179.4°
C10C11C14H1558.5°179.0°
C10C11C14H16178.2°61.2°
C11C10H22H23118.9°120.3°
C7N2C6H21180.0°180.0°
C7N2C6N1178.6°165.4°
C7N2C6C230.0°14.2°
N2C7C8C9176.9°178.7°
N2C7C8C151.4°1.7°
N2C7C14H1591.3°28.1°
N2C7C14H1628.5°91.8°
C6N2C7C80.1°13.8°
N2C6N1C23178.7°179.7°
N2C6N1N179.8°179.6°
N2C6C23C151.6°0.4°
N2C6C23C5179.7°179.7°
C7C8C9C107.8°0.7°
C7C8C9C15175.6°179.6°
C7C8C9O168.0°179.2°
C7C8C15C232.5°14.7°
C7C8C15C29119.8°134.8°
C7C8C15C30112.7°105.4°
C8C7C14H1588.8°151.8°
C8C7C14H16151.4°88.4°
C8C7N2H21179.9°166.2°
C10C9C8O175.8°179.9°
C10C9C8C15176.7°179.7°
C9C10H22H23118.9°120.2°
C6N1NC50.2°0.2°
N1C6C23C15179.6°179.9°
N1C6C23C51.5°0.0°
C6N1NH31179.8°179.8°
N1C6N2H211.4°14.6°
NN1C6C231.1°0.1°
N1NC5H31180.0°180.0°
N1NC5C230.7°0.2°
N1NC5C4179.8°180.0°
C6C23C15C82.7°13.8°
C6C23C5N1.3°0.2°
C6C23C15C5177.5°179.8°
C6C23C15C29117.8°133.9°
C6C23C15C30112.5°106.3°
C6C23C5C4179.6°179.9°
C23C6N2H21180.0°165.8°
C9C8C15C23177.9°165.7°
C9C8C15C2964.9°45.6°
C9C8C15C3062.7°74.3°
C8C9C10H22143.1°91.9°
C8C9C10H2397.6°147.8°
C15C8C9O7.5°0.4°
C8C15C23C29115.2°120.1°
C8C15C23C30115.1°120.1°
C8C15C23C5179.8°166.4°
C8C15C29C30119.9°119.8°
C8C15C30C2854.0°54.5°
C8C15C30C24125.6°126.0°
C8C15C29H24180.0°82.9°
C8C15C29H2560.0°157.2°
C8C15C29H2660.0°37.1°
OC9C10H2241.3°88.0°
OC9C10H2378.0°32.3°
NC5C23C15179.1°180.0°
NC5C23C4179.1°179.7°
NC5C4C164.3°60.6°
NC5C4H756.5°59.3°
NC5C4H8174.9°179.4°
C23C15C29C30122.7°119.8°
C15C23C5C41.7°0.3°
C23C15C30C2862.8°65.8°
C23C15C30C24117.6°113.7°
C23C15C29H2462.6°156.8°
C23C15C29H2557.4°36.9°
C23C15C29H26177.4°83.2°
C5C23C15C2964.7°46.3°
C5C23C15C3065.0°73.5°
C23C5C4C1116.8°119.0°
C23C5C4H7122.5°121.0°
C23C5C4H84.0°0.9°
C23C5NH31179.3°179.8°
C29C15C30C28173.4°174.3°
C29C15C30C246.2°6.2°
C15C29H24H25120.0°120.0°
C15C29H24H26120.0°120.1°
C15C29H25H26120.0°120.1°
C15C30C28C24179.6°179.5°
C15C30C28C27178.6°180.0°
C15C30C24C25179.0°180.0°
C15C30C24H171.0°0.3°
C30C15C29H2460.1°37.0°
C30C15C29H25179.9°83.0°
C30C15C29H2659.9°157.0°
C15C30C28H271.4°0.1°
C5C4C1H7120.7°120.0°
C5C4C1H8120.8°120.0°
C5C4C1C359.4°175.9°
C5C4C1C261.8°64.1°
C5C4C1C179.8°55.9°
C5C4H7H8117.7°120.0°
C4C5NH310.2°0.0°
C30C28C27H27180.0°179.9°
C30C28C27C261.2°0.2°
C28C30C24C251.4°0.5°
C28C30C24H17178.6°179.8°
C30C28C27H20178.8°179.7°
C27C28C30C241.8°0.5°
C28C27C26H20180.0°180.0°
C28C27C26C250.1°0.0°
C28C27C26H19179.9°180.0°
C30C24C25H17180.0°179.7°
C30C24C25C260.4°0.3°
C30C24C25H18179.6°179.7°
C24C30C28H27178.2°179.4°
C4C1C3C2124.5°120.0°
C4C1C3C119.0°119.9°
C4C1C2C118.4°120.0°
C4C1C2H1180.0°60.0°
C4C1C2H260.0°60.0°
C4C1C2H360.0°180.0°
C4C1C3H4180.0°60.1°
C4C1C3H560.0°60.0°
C4C1C3H660.0°180.0°
C1C4H7H8117.7°120.0°
C4C1CH28180.0°170.6°
C4C1CH2960.0°50.6°
C4C1CH3060.0°69.4°
C27C26C25C240.3°0.0°
C27C26C25H19180.0°180.0°
C27C26C25H18179.7°180.0°
C26C27C28H27178.8°179.7°
C3C1C2C118.2°120.0°
C3C1C2H156.6°179.9°
C3C1C2H2176.6°60.0°
C3C1C2H363.4°60.0°
C1C3H4H5120.0°120.1°
C1C3H4H6120.0°120.0°
C1C3H5H6120.0°120.0°
C3C1C4H761.3°55.9°
C3C1C4H8179.8°64.2°
C3C1CH2858.6°50.7°
C3C1CH2961.4°69.4°
C3C1CH30178.7°170.6°
C24C25C26H18180.0°180.0°
C24C25C26H19179.7°180.0°
C1C2H1H2120.0°120.0°
C1C2H1H3120.0°120.0°
C1C2H2H3120.0°120.0°
C2C1C3H455.5°60.0°
C2C1C3H564.5°180.0°
C2C1C3H6175.5°60.0°
C2C1C4H7177.4°175.9°
C2C1C4H858.9°55.9°
C2C1CH2858.0°69.4°
C2C1CH29178.0°170.6°
C2C1CH3062.0°50.6°
CC1C2H161.6°60.0°
CC1C2H258.4°180.0°
CC1C2H3178.4°60.0°
CC1C3H461.0°180.0°
CC1C3H5178.9°60.0°
CC1C3H659.0°60.1°
CC1C4H759.1°64.1°
CC1C4H859.4°175.9°
C1CH28H29120.0°120.0°
C1CH28H30120.0°120.0°
C1CH29H30120.0°120.0°
C26C25C24H17179.6°180.0°
C25C26C27H20179.8°180.0°
H1C2H2H3120.0°120.0°
H4C3H5H6120.0°119.9°
H9C12H10H11120.0°120.0°
H12C13H13H14120.0°119.9°
H17C24C25H180.4°0.0°
H18C25C26H190.3°0.1°
H19C26C27H200.1°0.0°
H20C27C28H271.2°0.3°
H24C29H25H26120.0°119.9°
H28CH29H30120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon