6SX
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2P | P | doub | 1.48Å | 1.49Å | |
| N7 | C8 | doub | 1.30Å | 1.36Å | Aromatic |
| N7 | C5 | sing | 1.36Å | 1.35Å | Aromatic |
| C8 | N9 | sing | 1.36Å | 1.35Å | Aromatic |
| C6 | C5 | doub | 1.40Å | 1.40Å | Aromatic |
| C6 | N1 | sing | 1.32Å | 1.35Å | Aromatic |
| C5 | C4 | sing | 1.41Å | 1.48Å | Aromatic |
| P | O1P | sing | 1.61Å | 1.49Å | |
| P | O3' | sing | 1.63Å | 1.62Å | |
| P | O5' | sing | 1.62Å | 1.59Å | |
| O3' | C3' | sing | 1.43Å | 1.38Å | |
| C3' | C2' | sing | 1.53Å | 1.51Å | |
| C3' | C4' | sing | 1.55Å | 1.50Å | |
| N1 | C2 | doub | 1.32Å | 1.36Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.32Å | Aromatic |
| N9 | C1' | sing | 1.46Å | 1.48Å | |
| C2' | C1' | sing | 1.55Å | 1.51Å | |
| C2' | O2' | sing | 1.43Å | 1.43Å | |
| C4 | N3 | doub | 1.33Å | 1.36Å | Aromatic |
| O5' | C5' | sing | 1.45Å | 1.42Å | |
| C5' | C4' | sing | 1.52Å | 1.51Å | |
| C1' | O4' | sing | 1.45Å | 1.42Å | |
| C4' | O4' | sing | 1.43Å | 1.42Å | |
| C2 | N3 | sing | 1.32Å | 1.35Å | Aromatic |
| C2 | H1 | sing | 1.08Å | 1.08Å | |
| C6 | H2 | sing | 1.08Å | 1.08Å | |
| O1P | H3 | sing | 0.97Å | 0.95Å | |
| C3' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| C5' | H6 | sing | 1.09Å | 1.10Å | |
| C5' | H7 | sing | 1.09Å | 1.10Å | |
| C2' | H8 | sing | 1.09Å | 1.10Å | |
| O2' | H9 | sing | 0.97Å | 0.95Å | |
| C1' | H10 | sing | 1.09Å | 1.10Å | |
| C8 | H11 | sing | 1.08Å | 1.08Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2P | P | O1P | 122.4° | 109.9° |
| O2P | P | O3' | 104.0° | 110.0° |
| O2P | P | O5' | 106.8° | 110.0° |
| C8 | N7 | C5 | 107.6° | 109.5° |
| N7 | C8 | N9 | 110.4° | 110.1° |
| N7 | C8 | H11 | 124.8° | 124.9° |
| N7 | C5 | C6 | 135.5° | 134.8° |
| N7 | C5 | C4 | 106.6° | 107.0° |
| C8 | N9 | C4 | 109.5° | 107.5° |
| C8 | N9 | C1' | 126.0° | 126.3° |
| N9 | C8 | H11 | 124.8° | 125.0° |
| C5 | C6 | N1 | 118.1° | 118.6° |
| C6 | C5 | C4 | 117.9° | 118.2° |
| C5 | C6 | H2 | 120.9° | 120.7° |
| C6 | N1 | C2 | 123.1° | 121.4° |
| N1 | C6 | H2 | 120.9° | 120.8° |
| C5 | C4 | N9 | 105.9° | 105.9° |
| C5 | C4 | N3 | 119.9° | 119.0° |
| O1P | P | O3' | 108.9° | 110.0° |
| O1P | P | O5' | 108.2° | 110.0° |
| P | O1P | H3 | 109.5° | 114.0° |
| O3' | P | O5' | 105.3° | 106.9° |
| P | O3' | C3' | 111.7° | 116.6° |
| P | O5' | C5' | 117.6° | 120.2° |
| O3' | C3' | C2' | 115.2° | 114.6° |
| O3' | C3' | C4' | 110.3° | 106.2° |
| O3' | C3' | H4 | 111.3° | 111.2° |
| C2' | C3' | C4' | 100.5° | 100.9° |
| C3' | C2' | C1' | 100.7° | 103.3° |
| C3' | C2' | O2' | 111.3° | 110.7° |
| C2' | C3' | H4 | 109.4° | 111.3° |
| C3' | C2' | H8 | 110.2° | 110.6° |
| C3' | C4' | C5' | 115.1° | 109.0° |
| C3' | C4' | O4' | 100.8° | 103.0° |
| C4' | C3' | H4 | 109.5° | 112.2° |
| C3' | C4' | H5 | 107.7° | 109.6° |
| N1 | C2 | N3 | 121.9° | 122.4° |
| N1 | C2 | H1 | 119.1° | 118.8° |
| C4 | N9 | C1' | 124.5° | 126.3° |
| N9 | C4 | N3 | 134.1° | 135.0° |
| N9 | C1' | C2' | 109.5° | 109.9° |
| N9 | C1' | O4' | 107.7° | 109.9° |
| N9 | C1' | H10 | 110.5° | 110.1° |
| C1' | C2' | O2' | 112.5° | 110.7° |
| C2' | C1' | O4' | 107.5° | 107.1° |
| C1' | C2' | H8 | 110.2° | 110.6° |
| C2' | C1' | H10 | 110.1° | 109.9° |
| O2' | C2' | H8 | 111.4° | 110.7° |
| C2' | O2' | H9 | 109.5° | 114.0° |
| C4 | N3 | C2 | 119.0° | 120.4° |
| O5' | C5' | C4' | 105.0° | 106.7° |
| O5' | C5' | H6 | 110.6° | 110.0° |
| O5' | C5' | H7 | 110.6° | 110.1° |
| C5' | C4' | O4' | 116.4° | 116.6° |
| C5' | C4' | H5 | 107.6° | 108.9° |
| C4' | C5' | H6 | 110.6° | 110.0° |
| C4' | C5' | H7 | 110.5° | 110.0° |
| C1' | O4' | C4' | 106.9° | 105.4° |
| O4' | C1' | H10 | 111.5° | 109.9° |
| O4' | C4' | H5 | 108.7° | 109.5° |
| N3 | C2 | H1 | 119.0° | 118.8° |
| H6 | C5' | H7 | 109.5° | 110.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2P | P | O1P | O3' | 121.3° | 121.2° |
| O2P | P | O1P | O5' | 124.7° | 121.3° |
| O2P | P | O3' | O5' | 112.2° | 119.4° |
| O2P | P | O3' | C3' | 60.5° | 81.3° |
| O2P | P | O5' | C5' | 57.4° | 85.4° |
| O2P | P | O1P | H3 | 0.0° | 58.8° |
| N7 | C8 | N9 | H11 | 180.0° | 179.9° |
| C8 | N7 | C5 | C6 | 179.4° | 179.9° |
| C8 | N7 | C5 | C4 | 0.0° | 0.0° |
| N7 | C8 | N9 | C4 | 0.5° | 0.0° |
| N7 | C8 | N9 | C1' | 179.8° | 180.0° |
| C5 | N7 | C8 | N9 | 0.3° | 0.0° |
| N7 | C5 | C6 | C4 | 179.4° | 179.9° |
| N7 | C5 | C6 | N1 | 179.8° | 180.0° |
| N7 | C5 | C4 | N9 | 0.3° | 0.0° |
| N7 | C5 | C4 | N3 | 179.9° | 180.0° |
| N7 | C5 | C6 | H2 | 0.3° | 0.1° |
| C5 | N7 | C8 | H11 | 179.7° | 179.9° |
| C8 | N9 | C4 | C5 | 0.5° | 0.0° |
| C8 | N9 | C4 | C1' | 179.6° | 180.0° |
| C8 | N9 | C1' | C2' | 71.1° | 95.0° |
| C8 | N9 | C4 | N3 | 179.8° | 180.0° |
| C8 | N9 | C1' | O4' | 45.6° | 22.7° |
| C8 | N9 | C1' | H10 | 167.5° | 143.9° |
| C5 | C6 | N1 | H2 | 180.0° | 179.9° |
| C5 | C6 | N1 | C2 | 0.7° | 0.1° |
| C6 | C5 | C4 | N9 | 179.9° | 179.9° |
| C6 | C5 | C4 | N3 | 0.4° | 0.1° |
| N1 | C6 | C5 | C4 | 0.9° | 0.1° |
| C6 | N1 | C2 | N3 | 0.0° | 0.1° |
| C6 | N1 | C2 | H1 | 180.0° | 180.0° |
| C5 | C4 | N9 | N3 | 179.7° | 180.0° |
| C5 | C4 | N9 | C1' | 179.8° | 180.0° |
| C5 | C4 | N3 | C2 | 0.3° | 0.1° |
| C4 | C5 | C6 | H2 | 179.1° | 180.0° |
| O1P | P | O3' | O5' | 115.9° | 119.4° |
| O1P | P | O3' | C3' | 167.5° | 157.4° |
| O1P | P | O5' | C5' | 169.1° | 153.4° |
| P | O3' | C3' | C2' | 170.9° | 167.9° |
| P | O3' | C3' | C4' | 58.1° | 57.5° |
| O3' | P | O5' | C5' | 52.7° | 34.0° |
| O3' | P | O1P | H3 | 121.3° | 180.0° |
| P | O3' | C3' | H4 | 63.7° | 64.8° |
| O5' | P | O3' | C3' | 51.6° | 38.1° |
| P | O5' | C5' | C4' | 55.2° | 49.7° |
| O5' | P | O1P | H3 | 124.7° | 62.6° |
| P | O5' | C5' | H6 | 174.5° | 69.6° |
| P | O5' | C5' | H7 | 64.1° | 169.0° |
| O3' | C3' | C2' | C4' | 118.4° | 113.6° |
| O3' | C3' | C2' | H4 | 126.4° | 127.2° |
| O3' | C3' | C4' | H4 | 122.9° | 121.6° |
| O3' | C3' | C2' | C1' | 156.7° | 139.4° |
| O3' | C3' | C2' | O2' | 37.3° | 20.9° |
| O3' | C3' | C4' | C5' | 63.4° | 72.7° |
| O3' | C3' | C4' | O4' | 170.4° | 162.9° |
| O3' | C3' | C4' | H5 | 56.6° | 46.4° |
| O3' | C3' | C2' | H8 | 86.9° | 102.2° |
| C2' | C3' | C4' | H4 | 115.1° | 118.6° |
| C3' | C2' | C1' | N9 | 101.1° | 118.1° |
| C3' | C2' | C1' | O2' | 118.5° | 118.5° |
| C3' | C2' | C1' | H8 | 116.4° | 118.4° |
| C3' | C2' | O2' | H8 | 123.5° | 123.0° |
| C2' | C3' | C4' | C5' | 174.6° | 167.5° |
| C3' | C2' | C1' | O4' | 15.6° | 1.3° |
| C2' | C3' | C4' | O4' | 48.4° | 43.1° |
| C2' | C3' | C4' | H5 | 65.4° | 73.4° |
| C3' | C2' | O2' | H9 | 180.0° | 180.0° |
| C3' | C2' | C1' | H10 | 137.2° | 120.6° |
| C4' | C3' | C2' | C1' | 38.2° | 25.8° |
| C4' | C3' | C2' | O2' | 81.2° | 92.7° |
| C3' | C4' | C5' | O5' | 58.1° | 67.1° |
| C3' | C4' | C5' | O4' | 117.7° | 116.0° |
| C3' | C4' | C5' | H5 | 120.0° | 119.5° |
| C3' | C4' | O4' | C1' | 39.6° | 43.7° |
| C3' | C4' | O4' | H5 | 113.1° | 116.5° |
| C3' | C4' | C5' | H6 | 177.4° | 52.2° |
| C3' | C4' | C5' | H7 | 61.2° | 173.4° |
| C4' | C3' | C2' | H8 | 154.7° | 144.3° |
| N1 | C2 | N3 | C4 | 0.5° | 0.0° |
| N1 | C2 | N3 | H1 | 180.0° | 179.9° |
| C2 | N1 | C6 | H2 | 179.3° | 180.0° |
| C4 | N9 | C1' | C2' | 108.5° | 85.0° |
| C4 | N9 | C1' | O4' | 134.9° | 157.3° |
| N9 | C4 | N3 | C2 | 179.4° | 179.9° |
| C4 | N9 | C1' | H10 | 12.9° | 36.1° |
| C4 | N9 | C8 | H11 | 179.5° | 179.9° |
| N9 | C1' | C2' | O4' | 116.7° | 119.4° |
| N9 | C1' | C2' | H10 | 121.7° | 121.3° |
| N9 | C1' | C2' | O2' | 140.3° | 123.4° |
| C1' | N9 | C4 | N3 | 0.2° | 0.0° |
| N9 | C1' | O4' | H10 | 121.4° | 121.3° |
| N9 | C1' | O4' | C4' | 133.0° | 146.1° |
| N9 | C1' | C2' | H8 | 15.3° | 0.3° |
| C1' | N9 | C8 | H11 | 0.1° | 0.1° |
| C1' | C2' | O2' | H8 | 124.4° | 123.0° |
| C2' | C1' | O4' | H10 | 120.7° | 119.3° |
| C2' | C1' | O4' | C4' | 15.1° | 26.7° |
| C1' | C2' | C3' | H4 | 76.9° | 93.4° |
| C1' | C2' | O2' | H9 | 67.9° | 66.1° |
| O2' | C2' | C1' | O4' | 103.0° | 117.2° |
| O2' | C2' | C3' | H4 | 163.7° | 148.1° |
| O2' | C2' | C1' | H10 | 18.6° | 2.1° |
| C4 | N3 | C2 | H1 | 179.5° | 180.0° |
| O5' | C5' | C4' | H6 | 119.3° | 119.3° |
| O5' | C5' | C4' | H7 | 119.3° | 119.4° |
| O5' | C5' | C4' | O4' | 175.8° | 176.9° |
| O5' | C5' | C4' | H5 | 61.9° | 52.4° |
| O5' | C5' | H6 | H7 | 122.1° | 121.4° |
| C5' | C4' | O4' | C1' | 164.8° | 163.0° |
| C5' | C4' | O4' | H5 | 121.7° | 124.2° |
| C5' | C4' | C3' | H4 | 59.4° | 48.9° |
| C4' | C5' | H6 | H7 | 122.0° | 121.3° |
| C1' | O4' | C4' | H5 | 73.5° | 72.9° |
| O4' | C1' | C2' | H8 | 132.0° | 119.7° |
| O4' | C4' | C3' | H4 | 66.7° | 75.5° |
| O4' | C4' | C5' | H6 | 64.9° | 63.8° |
| O4' | C4' | C5' | H7 | 56.5° | 57.4° |
| C4' | O4' | C1' | H10 | 105.6° | 92.6° |
| H4 | C3' | C4' | H5 | 179.4° | 168.0° |
| H4 | C3' | C2' | H8 | 39.5° | 25.0° |
| H5 | C4' | C5' | H6 | 57.4° | 171.7° |
| H5 | C4' | C5' | H7 | 178.8° | 67.0° |
| H8 | C2' | O2' | H9 | 56.5° | 56.9° |
| H8 | C2' | C1' | H10 | 106.4° | 121.0° |
