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6SD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1Osing1.43Å1.43Å
C7C6doub1.38Å1.38ÅAromatic
C7C2sing1.39Å1.39ÅAromatic
OC2sing1.36Å1.38Å
C6C5sing1.39Å1.39ÅAromatic
C2C3doub1.39Å1.39ÅAromatic
C5C4doub1.39Å1.39ÅAromatic
C5C8sing1.48Å1.48Å
C3C4sing1.38Å1.38ÅAromatic
N2C8doub1.32Å1.35ÅAromatic
N2N1sing1.40Å1.36ÅAromatic
C8C9sing1.41Å1.38ÅAromatic
N1C10sing1.36Å1.34ÅAromatic
C9C10doub1.36Å1.38ÅAromatic
C10N3sing1.39Å1.34Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H4sing1.08Å1.08Å
C7H5sing1.08Å1.08Å
C9H6sing1.08Å1.08Å
N3H7sing0.97Å1.00Å
N3H8sing0.97Å1.00Å
N1H9sing0.97Å1.00Å
C4H10sing1.08Å1.08Å
C6H11sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1OC2118.7°117.0°
OC1H1109.5°109.4°
OC1H2109.5°109.4°
OC1H3109.5°109.5°
C6C7C2119.8°120.1°
C7C6C5120.7°119.9°
C6C7H5120.1°120.0°
C7C6H11119.6°120.1°
C7C2O128.1°120.0°
C7C2C3120.0°120.1°
C2C7H5120.1°119.9°
OC2C3111.9°119.9°
C6C5C4118.6°119.9°
C6C5C8121.2°120.0°
C5C6H11119.6°120.1°
C2C3C4119.8°120.0°
C2C3H4120.2°120.0°
C4C5C8120.1°120.1°
C5C4C3121.1°119.9°
C5C4H10119.5°120.1°
C5C8N2123.2°125.9°
C5C8C9130.5°126.0°
C4C3H4120.1°120.0°
C3C4H10119.4°120.0°
C8N2N1111.9°108.3°
N2C8C9106.3°108.1°
N2N1C10104.7°108.0°
N2N1H9127.7°126.0°
C8C9C10106.3°107.8°
C8C9H6126.8°126.1°
N1C10C9110.9°107.7°
N1C10N3119.6°126.1°
C10N1H9127.7°126.0°
C9C10N3129.5°126.2°
C10C9H6126.8°126.1°
C10N3H7109.5°119.9°
C10N3H8109.5°120.0°
H1C1H2109.5°109.5°
H1C1H3109.4°109.5°
H2C1H3109.5°109.5°
H7N3H8109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1OC2C71.1°0.2°
C1OC2C3179.5°180.0°
OC1H1H2120.0°119.9°
OC1H1H3120.0°120.0°
OC1H2H3120.0°120.0°
C6C7C2H5180.0°180.0°
C6C7C2O176.9°179.8°
C7C6C5H11180.0°179.9°
C6C7C2C31.4°0.0°
C7C6C5C41.0°0.0°
C7C6C5C8175.5°180.0°
C7C2OC3178.4°179.8°
C2C7C6C50.1°0.0°
C7C2C3C42.0°0.1°
C7C2C3H4178.0°180.0°
C2C7C6H11179.9°179.9°
OC2C3C4176.6°179.7°
C2OC1H1180.0°60.0°
C2OC1H260.0°59.9°
C2OC1H360.0°180.0°
OC2C3H43.4°0.2°
OC2C7H53.1°0.2°
C6C5C4C8176.5°180.0°
C6C5C4C30.4°0.0°
C6C5C8N223.1°179.6°
C6C5C8C9155.0°0.0°
C5C6C7H5179.8°180.0°
C6C5C4H10179.6°180.0°
C2C3C4C51.1°0.1°
C2C3C4H4180.0°179.9°
C3C2C7H5178.6°180.0°
C2C3C4H10178.9°180.0°
C5C4C3H10180.0°179.9°
C4C5C8N2160.5°0.4°
C4C5C8C921.5°180.0°
C5C4C3H4178.9°180.0°
C4C5C6H11179.0°179.9°
C8C5C4C3176.1°179.9°
C5C8N2C9178.4°179.7°
C5C8N2N1178.4°179.7°
C5C8C9C10177.9°179.7°
C5C8C9H62.1°0.3°
C8C5C4H103.9°0.0°
C8C5C6H114.6°0.1°
C8N2N1C100.3°0.0°
N2C8C9C100.3°0.1°
N2C8C9H6179.7°180.0°
C8N2N1H9179.7°180.0°
N1N2C8C90.0°0.1°
N2N1C10H9180.0°180.0°
N2N1C10C90.5°0.0°
N2N1C10N3178.6°179.9°
C8C9C10N10.5°0.0°
C8C9C10H6180.0°180.0°
C8C9C10N3178.5°180.0°
N1C10C9N3179.0°179.9°
N1C10C9H6179.5°180.0°
N1C10N3H7180.0°180.0°
N1C10N3H860.0°0.1°
C9C10N3H71.1°0.1°
C9C10N3H8121.1°180.0°
C9C10N1H9179.5°180.0°
N3C10C9H61.6°0.1°
C10N3H7H8120.0°179.9°
N3C10N1H91.4°0.1°
H1C1H2H3120.0°120.0°
H4C3C4H101.1°0.1°
H5C7C6H110.2°0.0°

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PDB entries from 2024-07-24

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