6RE
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N6 | C6 | sing | 1.38Å | 1.34Å | |
C6 | C5 | doub | 1.41Å | 1.41Å | Aromatic |
C6 | N1 | sing | 1.33Å | 1.35Å | Aromatic |
N7 | C5 | sing | 1.35Å | 1.39Å | Aromatic |
N7 | C8 | doub | 1.30Å | 1.31Å | Aromatic |
C5 | C4 | sing | 1.40Å | 1.39Å | Aromatic |
N1 | C2 | doub | 1.32Å | 1.34Å | Aromatic |
C8 | N9 | sing | 1.36Å | 1.37Å | Aromatic |
C4 | N9 | sing | 1.37Å | 1.37Å | Aromatic |
C4 | N3 | doub | 1.33Å | 1.34Å | Aromatic |
C2 | N3 | sing | 1.32Å | 1.34Å | Aromatic |
N9 | C1' | sing | 1.46Å | 1.46Å | |
N9' | C8' | doub | 1.33Å | 1.32Å | |
C8' | N7' | sing | 1.37Å | 1.33Å | |
C8' | N10 | sing | 1.33Å | 1.32Å | |
C1' | C2' | sing | 1.55Å | 1.53Å | |
C1' | O4' | sing | 1.44Å | 1.42Å | |
C2' | O2' | sing | 1.43Å | 1.42Å | |
C2' | C3' | sing | 1.55Å | 1.53Å | |
C5' | C6' | sing | 1.53Å | 1.51Å | |
C5' | C4' | sing | 1.53Å | 1.51Å | |
N7' | C6' | sing | 1.47Å | 1.46Å | |
O4' | C4' | sing | 1.44Å | 1.45Å | |
C4' | C3' | sing | 1.54Å | 1.52Å | |
C3' | O3' | sing | 1.43Å | 1.42Å | |
C2 | H2 | sing | 1.08Å | 1.08Å | |
N6 | HN6 | sing | 0.97Å | 1.00Å | |
N6 | HN6A | sing | 0.97Å | 1.00Å | |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C1' | H1' | sing | 1.09Å | 1.10Å | |
C2' | H2' | sing | 1.09Å | 1.10Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C5' | H5' | sing | 1.09Å | 1.10Å | |
C5' | H5'A | sing | 1.09Å | 1.10Å | |
C6' | H6'A | sing | 1.09Å | 1.10Å | |
C6' | H6' | sing | 1.09Å | 1.10Å | |
N7' | HN7' | sing | 0.97Å | 1.00Å | |
N9' | HN9' | sing | 0.97Å | 1.00Å | |
N10 | HN9A | sing | 0.97Å | 1.00Å | |
N10 | HN9B | sing | 0.97Å | 1.00Å | |
N9' | HN9C | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N6 | C6 | C5 | 123.9° | 120.8° |
N6 | C6 | N1 | 118.4° | 120.8° |
C6 | N6 | HN6 | 109.5° | 120.0° |
C6 | N6 | HN6A | 109.5° | 120.0° |
C5 | C6 | N1 | 117.7° | 118.4° |
C6 | C5 | N7 | 132.3° | 134.7° |
C6 | C5 | C4 | 116.9° | 118.2° |
C6 | N1 | C2 | 118.8° | 121.2° |
C5 | N7 | C8 | 103.7° | 109.5° |
N7 | C5 | C4 | 110.7° | 107.1° |
N7 | C8 | N9 | 114.1° | 109.9° |
N7 | C8 | H8 | 122.9° | 125.0° |
C5 | C4 | N9 | 105.8° | 106.1° |
C5 | C4 | N3 | 126.8° | 119.1° |
N1 | C2 | N3 | 128.9° | 122.5° |
N1 | C2 | H2 | 115.6° | 118.8° |
C8 | N9 | C4 | 105.7° | 107.4° |
C8 | N9 | C1' | 127.2° | 126.3° |
N9 | C8 | H8 | 123.0° | 125.0° |
N9 | C4 | N3 | 127.5° | 134.9° |
C4 | N9 | C1' | 127.1° | 126.3° |
C4 | N3 | C2 | 111.0° | 120.6° |
N3 | C2 | H2 | 115.6° | 118.7° |
N9 | C1' | C2' | 114.5° | 110.6° |
N9 | C1' | O4' | 108.5° | 110.7° |
N9 | C1' | H1' | 109.2° | 110.5° |
N9' | C8' | N7' | 120.0° | 120.0° |
N9' | C8' | N10 | 119.5° | 120.0° |
C8' | N9' | HN9' | 120.0° | 120.0° |
C8' | N9' | HN9C | 120.0° | 120.0° |
N7' | C8' | N10 | 120.4° | 120.0° |
C8' | N7' | C6' | 126.3° | 120.0° |
C8' | N7' | HN7' | 116.9° | 120.0° |
C8' | N10 | HN9A | 120.0° | 120.0° |
C8' | N10 | HN9B | 120.0° | 120.0° |
C2' | C1' | O4' | 106.4° | 103.5° |
C1' | C2' | O2' | 111.3° | 110.9° |
C1' | C2' | C3' | 100.6° | 102.1° |
C2' | C1' | H1' | 108.3° | 110.6° |
C1' | C2' | H2' | 110.2° | 110.8° |
C1' | O4' | C4' | 110.0° | 107.0° |
O4' | C1' | H1' | 109.8° | 110.8° |
O2' | C2' | C3' | 112.3° | 110.9° |
O2' | C2' | H2' | 111.7° | 110.8° |
C2' | O2' | HO2' | 109.5° | 113.9° |
C2' | C3' | C4' | 101.9° | 104.2° |
C2' | C3' | O3' | 112.4° | 110.5° |
C3' | C2' | H2' | 110.2° | 111.0° |
C2' | C3' | H3' | 109.7° | 110.5° |
C6' | C5' | C4' | 111.0° | 109.5° |
C5' | C6' | N7' | 112.0° | 109.5° |
C6' | C5' | H5' | 109.1° | 109.4° |
C6' | C5' | H5'A | 109.1° | 109.5° |
C5' | C6' | H6'A | 108.8° | 109.4° |
C5' | C6' | H6' | 108.8° | 109.5° |
C5' | C4' | O4' | 107.2° | 110.0° |
C5' | C4' | C3' | 115.8° | 109.9° |
C5' | C4' | H4' | 109.2° | 109.8° |
C4' | C5' | H5' | 109.1° | 109.5° |
C4' | C5' | H5'A | 109.1° | 109.5° |
N7' | C6' | H6'A | 108.8° | 109.4° |
N7' | C6' | H6' | 108.8° | 109.5° |
C6' | N7' | HN7' | 116.8° | 120.0° |
O4' | C4' | C3' | 105.2° | 107.3° |
O4' | C4' | H4' | 110.2° | 109.9° |
C4' | C3' | O3' | 111.4° | 110.5° |
C4' | C3' | H3' | 109.8° | 110.6° |
C3' | C4' | H4' | 109.1° | 109.9° |
O3' | C3' | H3' | 111.3° | 110.5° |
C3' | O3' | HO3' | 109.5° | 114.0° |
HN6 | N6 | HN6A | 109.5° | 120.0° |
H5' | C5' | H5'A | 109.5° | 109.4° |
H6'A | C6' | H6' | 109.5° | 109.4° |
HN9' | N9' | HN9C | 120.0° | 120.0° |
HN9A | N10 | HN9B | 120.0° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N6 | C6 | C5 | N1 | 179.8° | 180.0° |
N6 | C6 | C5 | N7 | 0.4° | 0.0° |
N6 | C6 | C5 | C4 | 179.8° | 180.0° |
N6 | C6 | N1 | C2 | 179.6° | 180.0° |
C6 | N6 | HN6 | HN6A | 120.0° | 180.0° |
C6 | C5 | N7 | C4 | 179.8° | 180.0° |
C6 | C5 | N7 | C8 | 179.8° | 180.0° |
C5 | C6 | N1 | C2 | 0.2° | 0.0° |
C6 | C5 | C4 | N9 | 179.7° | 180.0° |
C6 | C5 | C4 | N3 | 0.3° | 0.0° |
C5 | C6 | N6 | HN6 | 179.8° | 0.0° |
C5 | C6 | N6 | HN6A | 59.8° | 180.0° |
N1 | C6 | C5 | N7 | 179.8° | 180.0° |
N1 | C6 | C5 | C4 | 0.0° | 0.0° |
C6 | N1 | C2 | N3 | 0.1° | 0.1° |
C6 | N1 | C2 | H2 | 179.9° | 180.0° |
N1 | C6 | N6 | HN6 | 0.0° | 180.0° |
N1 | C6 | N6 | HN6A | 120.0° | 0.0° |
C5 | N7 | C8 | N9 | 0.1° | 0.0° |
N7 | C5 | C4 | N9 | 0.2° | 0.0° |
N7 | C5 | C4 | N3 | 179.8° | 180.0° |
C5 | N7 | C8 | H8 | 179.9° | 179.9° |
C8 | N7 | C5 | C4 | 0.0° | 0.0° |
N7 | C8 | N9 | H8 | 180.0° | 179.9° |
N7 | C8 | N9 | C4 | 0.2° | 0.0° |
N7 | C8 | N9 | C1' | 179.2° | 180.0° |
C5 | C4 | N9 | C8 | 0.2° | 0.0° |
C5 | C4 | N9 | N3 | 180.0° | 180.0° |
C5 | C4 | N3 | C2 | 0.4° | 0.0° |
C5 | C4 | N9 | C1' | 179.2° | 180.0° |
N1 | C2 | N3 | C4 | 0.2° | 0.1° |
N1 | C2 | N3 | H2 | 180.0° | 179.9° |
C8 | N9 | C4 | C1' | 179.4° | 180.0° |
C8 | N9 | C4 | N3 | 179.8° | 180.0° |
C8 | N9 | C1' | C2' | 54.5° | 95.0° |
C8 | N9 | C1' | O4' | 64.2° | 19.1° |
C8 | N9 | C1' | H1' | 176.2° | 142.2° |
N9 | C4 | N3 | C2 | 179.6° | 180.0° |
C4 | N9 | C1' | C2' | 124.8° | 85.0° |
C4 | N9 | C1' | O4' | 116.6° | 160.9° |
C4 | N9 | C8 | H8 | 179.8° | 179.9° |
C4 | N9 | C1' | H1' | 3.1° | 37.8° |
N3 | C4 | N9 | C1' | 0.8° | 0.0° |
C4 | N3 | C2 | H2 | 179.8° | 180.0° |
N9 | C1' | C2' | O4' | 119.8° | 118.5° |
N9 | C1' | C2' | H1' | 122.2° | 122.8° |
N9 | C1' | O4' | H1' | 119.3° | 123.0° |
N9 | C1' | C2' | O2' | 87.9° | 86.2° |
N9 | C1' | C2' | C3' | 152.9° | 155.6° |
N9 | C1' | O4' | C4' | 137.3° | 158.5° |
C1' | N9 | C8 | H8 | 0.8° | 0.1° |
N9 | C1' | C2' | H2' | 36.6° | 37.2° |
N9' | C8' | N7' | N10 | 179.5° | 179.9° |
N9' | C8' | N7' | C6' | 179.0° | 180.0° |
N9' | C8' | N7' | HN7' | 1.0° | 0.1° |
C8' | N9' | HN9' | HN9C | 180.0° | 180.0° |
N9' | C8' | N10 | HN9A | 179.6° | 180.0° |
N9' | C8' | N10 | HN9B | 0.5° | 0.0° |
C8' | N7' | C6' | C5' | 111.6° | 180.0° |
C8' | N7' | C6' | HN7' | 180.0° | 179.9° |
C8' | N7' | C6' | H6'A | 8.8° | 60.1° |
C8' | N7' | C6' | H6' | 128.1° | 59.9° |
N7' | C8' | N9' | HN9' | 179.5° | 0.1° |
N7' | C8' | N10 | HN9A | 0.0° | 0.0° |
N7' | C8' | N10 | HN9B | 180.0° | 180.0° |
N7' | C8' | N9' | HN9C | 0.5° | 180.0° |
N10 | C8' | N7' | C6' | 0.5° | 0.1° |
N10 | C8' | N7' | HN7' | 179.5° | 180.0° |
N10 | C8' | N9' | HN9' | 0.0° | 180.0° |
C8' | N10 | HN9A | HN9B | 180.0° | 180.0° |
N10 | C8' | N9' | HN9C | 180.0° | 0.0° |
C2' | C1' | O4' | H1' | 117.0° | 118.5° |
C1' | C2' | O2' | C3' | 111.9° | 112.7° |
C1' | C2' | O2' | H2' | 123.6° | 123.5° |
C1' | C2' | C3' | H2' | 116.3° | 118.2° |
C2' | C1' | O4' | C4' | 13.6° | 40.0° |
C1' | C2' | C3' | C4' | 38.9° | 20.9° |
C1' | C2' | C3' | O3' | 80.5° | 97.8° |
C1' | C2' | O2' | HO2' | 180.0° | 180.0° |
C1' | C2' | C3' | H3' | 155.2° | 139.7° |
O4' | C1' | C2' | O2' | 152.2° | 155.2° |
O4' | C1' | C2' | C3' | 33.1° | 37.0° |
C1' | O4' | C4' | C5' | 111.9° | 146.0° |
C1' | O4' | C4' | C3' | 11.9° | 26.5° |
O4' | C1' | C2' | H2' | 83.2° | 81.3° |
C1' | O4' | C4' | H4' | 129.4° | 92.9° |
O2' | C2' | C3' | H2' | 125.3° | 123.7° |
O2' | C2' | C3' | C4' | 157.3° | 139.1° |
O2' | C2' | C3' | O3' | 38.0° | 20.4° |
O2' | C2' | C1' | H1' | 34.2° | 36.6° |
O2' | C2' | C3' | H3' | 86.4° | 102.2° |
C2' | C3' | C4' | C5' | 85.9° | 121.6° |
C2' | C3' | C4' | O4' | 32.3° | 2.0° |
C2' | C3' | C4' | O3' | 120.0° | 118.7° |
C2' | C3' | C4' | H3' | 116.3° | 118.7° |
C2' | C3' | O3' | H3' | 123.5° | 122.6° |
C3' | C2' | C1' | H1' | 85.0° | 81.6° |
C3' | C2' | O2' | HO2' | 68.1° | 67.3° |
C2' | C3' | O3' | HO3' | 180.0° | 61.5° |
C2' | C3' | C4' | H4' | 150.4° | 117.4° |
C6' | C5' | C4' | H5' | 120.2° | 120.0° |
C6' | C5' | C4' | H5'A | 120.2° | 120.1° |
C5' | C6' | N7' | H6'A | 120.4° | 120.0° |
C5' | C6' | N7' | H6' | 120.4° | 120.1° |
C6' | C5' | C4' | O4' | 142.6° | 67.1° |
C6' | C5' | C4' | C3' | 100.4° | 175.0° |
C6' | C5' | C4' | H4' | 23.2° | 54.0° |
C6' | C5' | H5' | H5'A | 119.3° | 120.0° |
C5' | C6' | H6'A | H6' | 118.8° | 120.0° |
C5' | C6' | N7' | HN7' | 68.5° | 0.1° |
C4' | C5' | C6' | N7' | 175.7° | 180.0° |
C5' | C4' | O4' | C3' | 123.8° | 119.5° |
C5' | C4' | O4' | H4' | 118.8° | 121.0° |
C5' | C4' | C3' | H4' | 123.7° | 121.0° |
C5' | C4' | C3' | O3' | 154.1° | 119.7° |
C5' | C4' | C3' | H3' | 30.4° | 2.9° |
C4' | C5' | H5' | H5'A | 119.3° | 120.0° |
C4' | C5' | C6' | H6'A | 63.9° | 60.0° |
C4' | C5' | C6' | H6' | 55.3° | 60.0° |
N7' | C6' | C5' | H5' | 64.1° | 60.0° |
N7' | C6' | C5' | H5'A | 55.4° | 59.9° |
N7' | C6' | H6'A | H6' | 118.8° | 120.0° |
O4' | C4' | C3' | H4' | 118.2° | 119.4° |
O4' | C4' | C3' | O3' | 87.8° | 120.7° |
C4' | O4' | C1' | H1' | 103.4° | 78.5° |
O4' | C4' | C3' | H3' | 148.5° | 116.7° |
O4' | C4' | C5' | H5' | 22.4° | 172.9° |
O4' | C4' | C5' | H5'A | 97.2° | 53.0° |
C4' | C3' | O3' | H3' | 122.9° | 122.7° |
C4' | C3' | C2' | H2' | 77.4° | 97.3° |
C4' | C3' | O3' | HO3' | 66.3° | 176.2° |
C3' | C4' | C5' | H5' | 139.4° | 55.0° |
C3' | C4' | C5' | H5'A | 19.9° | 65.0° |
O3' | C3' | C2' | H2' | 163.3° | 144.0° |
O3' | C3' | C4' | H4' | 30.4° | 1.3° |
H1' | C1' | C2' | H2' | 158.7° | 160.1° |
H2' | C2' | O2' | HO2' | 56.4° | 56.5° |
H2' | C2' | C3' | H3' | 38.9° | 21.5° |
H3' | C3' | O3' | HO3' | 56.5° | 61.1° |
H3' | C3' | C4' | H4' | 93.3° | 123.9° |
H4' | C4' | C5' | H5' | 97.0° | 66.0° |
H4' | C4' | C5' | H5'A | 143.5° | 174.0° |
H5' | C5' | C6' | H6'A | 56.2° | NaN° |
H5' | C5' | C6' | H6' | 175.5° | 60.0° |
H5'A | C5' | C6' | H6'A | 175.8° | 60.1° |
H5'A | C5' | C6' | H6' | 64.9° | 180.0° |
H6'A | C6' | N7' | HN7' | 171.1° | 120.0° |
H6' | C6' | N7' | HN7' | 51.9° | 120.0° |