Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6RD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAANBHsing1.46Å1.46Å
CAJCAGdoub1.36Å1.35ÅAromatic
CAJCBCsing1.41Å1.44ÅAromatic
CAICBCdoub1.41Å1.42ÅAromatic
CAICACsing1.36Å1.35ÅAromatic
CAGCAHsing1.39Å1.41ÅAromatic
CBCCBEsing1.42Å1.43ÅAromatic
CACCAEdoub1.39Å1.41ÅAromatic
CAHCAXdoub1.36Å1.39ÅAromatic
NATNBHsing1.29Å1.35ÅAromatic
NATCBAdoub1.32Å1.34ÅAromatic
NBHCBBsing1.34Å1.36ÅAromatic
CBECAXsing1.41Å1.42ÅAromatic
CBECALdoub1.40Å1.43ÅAromatic
CAECALsing1.36Å1.37ÅAromatic
CAXCAQsing1.51Å1.52Å
NAUCAQsing1.47Å1.46Å
NAUCAWsing1.35Å1.35Å
CBACAWsing1.48Å1.45Å
CBACAZsing1.40Å1.42ÅAromatic
CBBCAOsing1.51Å1.49Å
CBBCAZdoub1.36Å1.37ÅAromatic
CAWOABdoub1.22Å1.24Å
CAOCAPsing1.54Å1.51Å
CAZCASsing1.50Å1.49Å
CAPNBGsing1.47Å1.45Å
CASNBGsing1.47Å1.43Å
NBGCARsing1.47Å1.46Å
CAMCAFdoub1.37Å1.41ÅAromatic
CAMCBFsing1.40Å1.40ÅAromatic
CAFCADsing1.39Å1.37ÅAromatic
CARCAYsing1.51Å1.52Å
CADCAKdoub1.38Å1.38ÅAromatic
CBFCAYsing1.47Å1.44ÅAromatic
CBFCBDdoub1.41Å1.39ÅAromatic
CAYCANdoub1.34Å1.34ÅAromatic
CAKCBDsing1.39Å1.41ÅAromatic
CBDNAVsing1.38Å1.38ÅAromatic
CANNAVsing1.37Å1.39ÅAromatic
CAHHAIsing1.08Å1.08Å
CAGHAHsing1.08Å1.08Å
CAJHAKsing1.08Å1.08Å
CAIHAJsing1.08Å1.08Å
CACHADsing1.08Å1.08Å
CAEHAFsing1.08Å1.08Å
CALHAMsing1.08Å1.08Å
CAQHATsing1.09Å1.10Å
CAQHAUsing1.09Å1.10Å
NAUHBHsing0.97Å1.00Å
CASHAXsing1.09Å1.10Å
CASHAYsing1.09Å1.10Å
CAAHABsing1.09Å1.10Å
CAAHACsing1.09Å1.10Å
CAAHAAsing1.09Å1.10Å
CAOHAPsing1.09Å1.10Å
CAOHAQsing1.09Å1.10Å
CAPHASsing1.09Å1.10Å
CAPHARsing1.09Å1.10Å
CARHAVsing1.09Å1.10Å
CARHAWsing1.09Å1.10Å
CAMHANsing1.08Å1.08Å
CAFHAGsing1.08Å1.08Å
CADHAEsing1.08Å1.08Å
CAKHALsing1.08Å1.08Å
NAVHBIsing0.97Å1.00Å
CANHAOsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAANBHNAT121.4°125.0°
CAANBHCBB127.1°125.0°
NBHCAAHAB109.5°109.5°
NBHCAAHAC109.5°109.5°
NBHCAAHAA109.4°109.5°
CAGCAJCBC120.5°119.6°
CAJCAGCAH121.1°121.0°
CAJCAGHAH119.5°119.5°
CAGCAJHAK119.8°120.2°
CAJCBCCAI120.8°121.3°
CAJCBCCBE119.4°119.4°
CBCCAJHAK119.8°120.2°
CBCCAICAC119.6°119.7°
CAICBCCBE119.8°119.3°
CBCCAIHAJ120.2°120.2°
CAICACCAE121.2°121.0°
CACCAIHAJ120.2°120.2°
CAICACHAD119.4°119.5°
CAGCAHCAX119.9°121.0°
CAGCAHHAI120.1°119.5°
CAHCAGHAH119.4°119.5°
CBCCBECAX118.1°119.3°
CBCCBECAL119.2°119.4°
CACCAECAL121.5°121.0°
CAECACHAD119.4°119.5°
CACCAEHAF119.3°119.5°
CAHCAXCBE120.9°119.7°
CAHCAXCAQ119.7°120.2°
CAXCAHHAI120.0°119.5°
NBHNATCBA105.9°110.2°
NATNBHCBB111.5°110.0°
NATCBACAW121.1°126.7°
NATCBACAZ110.2°106.6°
NBHCBBCAO127.7°129.8°
NBHCBBCAZ107.4°107.3°
CAXCBECAL122.6°121.3°
CBECAXCAQ119.3°120.1°
CBECALCAE118.7°119.6°
CBECALHAM120.7°120.2°
CALCAEHAF119.2°119.5°
CAECALHAM120.7°120.2°
CAXCAQNAU113.8°109.5°
CAXCAQHAT108.4°109.4°
CAXCAQHAU108.4°109.5°
CAQNAUCAW123.6°120.0°
NAUCAQHAT108.4°109.5°
NAUCAQHAU108.4°109.5°
CAQNAUHBH118.2°120.0°
NAUCAWCBA115.7°120.0°
NAUCAWOAB127.5°120.0°
CAWNAUHBH118.2°120.0°
CAWCBACAZ128.7°126.7°
CBACAWOAB115.8°120.0°
CBACAZCBB105.0°105.9°
CBACAZCAS132.7°130.2°
CAOCBBCAZ124.8°122.9°
CBBCAOCAP108.9°107.8°
CBBCAOHAP109.6°109.7°
CBBCAOHAQ109.6°109.8°
CBBCAZCAS122.3°123.9°
CAOCAPNBG112.3°109.9°
CAPCAOHAP109.6°109.8°
CAPCAOHAQ109.6°109.8°
CAOCAPHAS108.8°109.4°
CAOCAPHAR108.7°109.4°
CAZCASNBG109.7°108.2°
CAZCASHAX109.4°109.8°
CAZCASHAY109.4°109.7°
CAPNBGCAS119.0°111.7°
CAPNBGCAR112.9°111.0°
NBGCAPHAS108.7°109.2°
NBGCAPHAR108.8°109.5°
CASNBGCAR115.9°111.0°
NBGCASHAX109.4°109.7°
NBGCASHAY109.4°109.7°
NBGCARCAY111.1°109.5°
NBGCARHAV109.1°109.5°
NBGCARHAW109.0°109.5°
CAFCAMCBF117.5°119.7°
CAMCAFCAD123.5°120.5°
CAFCAMHAN121.2°120.2°
CAMCAFHAG118.2°119.8°
CAMCBFCAY133.5°134.0°
CAMCBFCBD118.9°120.0°
CBFCAMHAN121.2°120.1°
CAFCADCAK118.6°120.7°
CADCAFHAG118.2°119.7°
CAFCADHAE120.7°119.7°
CARCAYCBF129.1°126.5°
CARCAYCAN123.9°126.5°
CAYCARHAV109.1°109.4°
CAYCARHAW109.0°109.4°
CADCAKCBD119.1°119.8°
CAKCADHAE120.7°119.6°
CADCAKHAL120.4°120.1°
CAYCBFCBD107.5°106.0°
CBFCAYCAN107.0°107.0°
CBFCBDCAK122.2°119.3°
CBFCBDNAV107.2°107.2°
CAYCANNAV109.3°109.9°
CAYCANHAO125.4°125.0°
CAKCBDNAV130.6°133.6°
CBDCAKHAL120.4°120.1°
CBDNAVCAN109.0°109.9°
CBDNAVHBI125.5°125.0°
CANNAVHBI125.5°125.0°
NAVCANHAO125.3°125.1°
HATCAQHAU109.5°109.5°
HAXCASHAY109.5°109.7°
HABCAAHAC109.5°109.4°
HABCAAHAA109.5°109.5°
HACCAAHAA109.5°109.4°
HAPCAOHAQ109.5°109.8°
HASCAPHAR109.4°109.4°
HAVCARHAW109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAANBHNATCBB179.1°179.9°
CAANBHNATCBA178.8°179.9°
CAANBHCBBCAO0.3°0.2°
CAANBHCBBCAZ178.8°180.0°
NBHCAAHABHAC120.0°120.0°
NBHCAAHABHAA120.0°120.0°
NBHCAAHACHAA120.0°120.0°
CAGCAJCBCHAK180.0°180.0°
CAGCAJCBCCAI178.1°179.9°
CAJCAGCAHHAH180.0°180.0°
CAGCAJCBCCBE2.5°0.0°
CAJCAGCAHCAX0.1°0.0°
CAJCAGCAHHAI179.9°179.7°
CAJCBCCAICBE179.4°179.9°
CAJCBCCAICAC179.6°180.0°
CBCCAJCAGCAH0.8°0.0°
CAJCBCCBECAX3.4°0.0°
CAJCBCCBECAL179.2°180.0°
CBCCAJCAGHAH179.2°180.0°
CAJCBCCAIHAJ0.4°0.1°
CBCCAICACHAJ180.0°179.9°
CBCCAICACCAE0.8°0.0°
CAICBCCBECAX177.2°179.9°
CAICBCCBECAL0.2°0.1°
CAICBCCAJHAK1.9°0.1°
CBCCAICACHAD179.2°180.0°
CACCAICBCCBE0.2°0.1°
CAICACCAEHAD180.0°180.0°
CAICACCAECAL1.0°0.0°
CAICACCAEHAF178.9°180.0°
CAGCAHCAXHAI180.0°179.8°
CAGCAHCAXCBE1.1°0.0°
CAGCAHCAXCAQ178.0°179.7°
CAHCAGCAJHAK179.2°180.0°
CBCCBECAXCAH2.7°0.0°
CBCCBECAXCAL177.3°180.0°
CBCCBECALCAE0.0°0.1°
CBCCBECAXCAQ176.3°179.7°
CBECBCCAJHAK177.5°180.0°
CBECBCCAIHAJ179.8°180.0°
CBCCBECALHAM180.0°180.0°
CACCAECALCBE0.6°0.0°
CACCAECALHAF180.0°180.0°
CAECACCAIHAJ179.2°179.9°
CACCAECALHAM179.4°180.0°
CAHCAXCBECAQ179.1°179.7°
CAHCAXCBECAL180.0°180.0°
CAHCAXCAQNAU11.2°100.0°
CAXCAHCAGHAH179.9°180.0°
CAHCAXCAQHAT131.8°20.0°
CAHCAXCAQHAU109.5°140.0°
NBHNATCBACAW177.1°180.0°
NBHNATCBACAZ0.2°0.2°
NATNBHCBBCAO179.3°179.7°
NATNBHCBBCAZ0.3°0.1°
NATNBHCAAHAB0.0°90.0°
NATNBHCAAHAC120.0°150.1°
NATNBHCAAHAA120.0°30.1°
CBANATNBHCBB0.3°0.2°
NATCBACAWNAU2.1°0.3°
NATCBACAWCAZ176.7°179.7°
NATCBACAZCBB0.0°0.2°
NATCBACAWOAB167.0°179.7°
NATCBACAZCAS179.8°180.0°
NBHCBBCAZCBA0.1°0.1°
NBHCBBCAOCAZ178.9°179.8°
NBHCBBCAOCAP165.0°163.9°
NBHCBBCAZCAS180.0°179.9°
CBBNBHCAAHAB179.0°90.1°
CBBNBHCAAHAC59.0°29.8°
CBBNBHCAAHAA61.0°149.8°
NBHCBBCAOHAP45.1°44.4°
NBHCBBCAOHAQ75.1°76.4°
CAXCBECALCAE177.3°180.0°
CBECAXCAQNAU167.9°79.7°
CBECAXCAHHAI178.9°179.7°
CAXCBECALHAM2.7°0.0°
CBECAXCAQHAT47.3°160.3°
CBECAXCAQHAU71.4°40.3°
CBECALCAEHAM180.0°179.9°
CALCBECAXCAQ1.0°0.3°
CBECALCAEHAF179.4°180.0°
CALCAECACHAD179.0°180.0°
CAXCAQNAUHAT120.7°120.0°
CAXCAQNAUHAU120.7°120.0°
CAXCAQNAUCAW92.9°180.0°
CAQCAXCAHHAI2.1°0.0°
CAXCAQHATHAU118.0°120.0°
CAXCAQNAUHBH87.1°0.0°
CAQNAUCAWHBH180.0°180.0°
CAQNAUCAWCBA176.8°180.0°
CAQNAUCAWOAB9.3°0.0°
NAUCAQHATHAU118.0°120.0°
NAUCAWCBAOAB169.0°180.0°
NAUCAWCBACAZ174.7°180.0°
CAWNAUCAQHAT146.5°60.0°
CAWNAUCAQHAU27.8°60.0°
CAWCBACAZCBB177.0°179.9°
CAWCBACAZCAS3.2°0.3°
CBACAWNAUHBH3.2°0.0°
CBACAZCBBCAO179.2°179.9°
CBACAZCBBCAS179.9°179.8°
CAZCBACAWOAB16.3°0.0°
CBACAZCASNBG169.0°163.8°
CBACAZCASHAX48.9°44.1°
CBACAZCASHAY71.0°76.6°
CBBCAOCAPHAP119.9°119.5°
CBBCAOCAPHAQ119.9°119.6°
CAOCBBCAZCAS0.9°0.3°
CBBCAOCAPNBG41.5°49.1°
CBBCAOHAPHAQ120.3°120.8°
CBBCAOCAPHAS78.9°70.8°
CBBCAOCAPHAR162.0°169.4°
CAZCBBCAOCAP16.0°15.8°
CBBCAZCASNBG11.2°16.0°
CBBCAZCASHAX131.2°135.7°
CBBCAZCASHAY108.9°103.7°
CAZCBBCAOHAP135.9°135.4°
CAZCBBCAOHAQ103.8°103.8°
OABCAWNAUHBH170.8°180.0°
CAOCAPNBGHAS120.5°120.1°
CAOCAPNBGHAR120.4°120.2°
CAOCAPNBGCAS59.1°71.1°
CAOCAPNBGCAR160.0°164.4°
CAPCAOHAPHAQ120.3°120.9°
CAOCAPHASHAR118.7°119.8°
CAZCASNBGCAP40.7°50.7°
CAZCASNBGHAX120.0°119.7°
CAZCASNBGHAY120.1°119.7°
CAZCASNBGCAR179.5°175.2°
CAZCASHAXHAY119.9°120.7°
CAPNBGCASCAR139.9°124.5°
CAPNBGCARCAY68.9°65.2°
CAPNBGCASHAX160.7°170.4°
CAPNBGCASHAY79.4°69.0°
NBGCAPCAOHAP161.4°168.6°
NBGCAPCAOHAQ78.4°70.5°
NBGCAPHASHAR118.7°119.8°
CAPNBGCARHAV51.3°174.8°
CAPNBGCARHAW170.8°54.8°
CASNBGCARCAY73.3°170.0°
NBGCASHAXHAY119.9°120.6°
CASNBGCAPHAS61.4°49.0°
CASNBGCAPHAR179.5°168.7°
CASNBGCARHAV166.4°50.0°
CASNBGCARHAW46.9°70.1°
NBGCARCAYHAV120.3°120.0°
NBGCARCAYHAW120.2°120.0°
NBGCARCAYCBF88.0°80.3°
NBGCARCAYCAN94.6°100.0°
CARNBGCASHAX59.4°65.1°
CARNBGCASHAY60.5°55.5°
CARNBGCAPHAS79.6°75.5°
CARNBGCAPHAR39.5°44.3°
NBGCARHAVHAW119.2°120.0°
CAFCAMCBFHAN180.0°180.0°
CAMCAFCADHAG180.0°180.0°
CAMCAFCADCAK3.1°0.0°
CAFCAMCBFCAY178.1°180.0°
CAFCAMCBFCBD0.2°0.0°
CAMCAFCADHAE176.9°180.0°
CBFCAMCAFCAD2.3°0.0°
CAMCBFCAYCAR0.3°0.1°
CAMCBFCAYCBD178.1°179.9°
CAMCBFCAYCAN177.4°179.8°
CAMCBFCBDCAK1.8°0.0°
CAMCBFCBDNAV178.8°180.0°
CBFCAMCAFHAG177.7°180.0°
CAFCADCAKHAE180.0°179.9°
CAFCADCAKCBD1.4°0.1°
CADCAFCAMHAN177.7°180.0°
CAFCADCAKHAL178.6°180.0°
CARCAYCBFCAN177.7°179.7°
CARCAYCBFCBD178.4°180.0°
CARCAYCANNAV179.3°179.9°
CAYCARHAVHAW119.2°120.0°
CARCAYCANHAO0.7°0.0°
CADCAKCBDCBF1.0°0.1°
CADCAKCBDHAL180.0°179.9°
CADCAKCBDNAV179.7°180.0°
CAKCADCAFHAG176.9°179.9°
CAYCBFCBDCAK179.8°179.9°
CAYCBFCBDNAV0.3°0.0°
CBFCAYCANNAV1.4°0.4°
CBFCAYCARHAV32.2°39.7°
CBFCAYCARHAW151.7°159.7°
CAYCBFCAMHAN1.9°0.1°
CBFCAYCANHAO178.6°179.7°
CBDCBFCAYCAN0.7°0.3°
CBFCBDCAKNAV179.3°179.9°
CBFCBDNAVCAN1.2°0.2°
CBDCBFCAMHAN179.8°180.0°
CBFCBDCAKHAL179.0°180.0°
CBFCBDNAVHBI178.8°180.0°
CAYCANNAVCBD1.7°0.4°
CAYCANNAVHAO180.0°179.9°
CANCAYCARHAV145.2°139.9°
CANCAYCARHAW25.7°19.9°
CAYCANNAVHBI178.4°179.8°
CAKCBDNAVCAN179.4°179.8°
CBDCAKCADHAE178.6°180.0°
CAKCBDNAVHBI0.5°0.1°
CBDNAVCANHBI180.0°179.8°
NAVCBDCAKHAL0.3°0.1°
CBDNAVCANHAO178.3°179.7°
HAICAHCAGHAH0.1°0.3°
HAHCAGCAJHAK0.8°0.0°
HAJCAICACHAD0.8°0.1°
HADCACCAEHAF1.0°0.0°
HAFCAECALHAM0.6°0.1°
HATCAQNAUHBH33.5°120.0°
HAUCAQNAUHBH152.2°120.0°
HABCAAHACHAA120.0°120.0°
HAPCAOCAPHAS41.0°48.7°
HAPCAOCAPHAR78.1°71.1°
HAQCAOCAPHAS161.2°169.6°
HAQCAOCAPHAR42.1°49.8°
HANCAMCAFHAG2.3°0.0°
HAGCAFCADHAE3.1°0.0°
HAECADCAKHAL1.4°0.0°
HBINAVCANHAO1.6°0.1°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon