6PO
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N2 | C2 | sing | 1.38Å | 1.43Å | |
| O3' | C3' | sing | 1.43Å | 1.38Å | |
| N3 | C2 | doub | 1.32Å | 1.37Å | Aromatic |
| N3 | C4 | sing | 1.33Å | 1.38Å | Aromatic |
| C2 | N1 | sing | 1.33Å | 1.36Å | Aromatic |
| C1' | O4' | sing | 1.44Å | 1.40Å | |
| C1' | N9 | sing | 1.47Å | 1.44Å | |
| C1' | C2' | sing | 1.55Å | 1.48Å | |
| O4' | C4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.55Å | 1.47Å | |
| C4' | C5' | sing | 1.53Å | 1.42Å | |
| C3' | C2' | sing | 1.54Å | 1.47Å | |
| C4 | N9 | sing | 1.37Å | 1.40Å | Aromatic |
| C4 | C5 | doub | 1.41Å | 1.39Å | Aromatic |
| N1 | C6 | doub | 1.33Å | 1.36Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.36Å | Aromatic |
| C5 | C6 | sing | 1.40Å | 1.46Å | Aromatic |
| C5 | N7 | sing | 1.36Å | 1.38Å | Aromatic |
| C6 | O6 | sing | 1.35Å | 1.42Å | |
| C5' | O5' | sing | 1.43Å | 1.41Å | |
| C8 | N7 | doub | 1.30Å | 1.36Å | Aromatic |
| O5' | P | sing | 1.61Å | 1.59Å | |
| O6 | C1X | sing | 1.43Å | 1.41Å | |
| C1X | C2X | sing | 1.53Å | 1.53Å | |
| C3X | C2X | sing | 1.53Å | 1.52Å | |
| OP2 | P | sing | 1.61Å | 1.57Å | |
| P | OP1 | doub | 1.48Å | 1.57Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'' | sing | 1.09Å | 1.10Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N2 | HN1 | sing | 0.97Å | 1.00Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| C1X | H1X1 | sing | 1.09Å | 1.10Å | |
| C1X | H1X2 | sing | 1.09Å | 1.10Å | |
| C2X | H2X1 | sing | 1.09Å | 1.10Å | |
| C2X | H2X2 | sing | 1.09Å | 1.10Å | |
| C3X | H3X1 | sing | 1.09Å | 1.10Å | |
| C3X | H3X2 | sing | 1.09Å | 1.10Å | |
| C3X | H3X3 | sing | 1.09Å | 1.10Å | |
| P | OP3 | sing | 1.61Å | 37.64Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N2 | C2 | N3 | 118.7° | 118.9° |
| N2 | C2 | N1 | 118.1° | 118.9° |
| C2 | N2 | HN1 | 109.5° | 120.0° |
| C2 | N2 | HN2 | 109.5° | 120.0° |
| O3' | C3' | C4' | 111.1° | 110.5° |
| O3' | C3' | C2' | 110.8° | 110.5° |
| O3' | C3' | H3' | 110.7° | 110.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C2 | N3 | C4 | 120.7° | 120.6° |
| N3 | C2 | N1 | 123.2° | 122.2° |
| N3 | C4 | N9 | 136.3° | 134.9° |
| N3 | C4 | C5 | 118.2° | 119.1° |
| C2 | N1 | C6 | 118.2° | 121.2° |
| O4' | C1' | N9 | 111.1° | 110.4° |
| O4' | C1' | C2' | 105.9° | 104.8° |
| C1' | O4' | C4' | 107.5° | 105.3° |
| O4' | C1' | H1' | 109.8° | 110.4° |
| N9 | C1' | C2' | 112.2° | 110.4° |
| C1' | N9 | C4 | 128.2° | 126.2° |
| C1' | N9 | C8 | 122.6° | 126.3° |
| N9 | C1' | H1' | 109.2° | 110.4° |
| C1' | C2' | C3' | 102.7° | 104.1° |
| C1' | C2' | H2' | 111.2° | 110.5° |
| C1' | C2' | H2'' | 111.1° | 110.6° |
| C2' | C1' | H1' | 108.6° | 110.5° |
| O4' | C4' | C3' | 106.8° | 104.8° |
| O4' | C4' | C5' | 110.3° | 110.4° |
| O4' | C4' | H4' | 111.1° | 110.5° |
| C3' | C4' | C5' | 106.1° | 110.3° |
| C4' | C3' | C2' | 105.3° | 104.0° |
| C3' | C4' | H4' | 110.8° | 110.4° |
| C4' | C3' | H3' | 109.4° | 110.5° |
| C4' | C5' | O5' | 124.2° | 109.5° |
| C4' | C5' | H5' | 105.6° | 109.5° |
| C4' | C5' | H5'' | 105.7° | 109.5° |
| C5' | C4' | H4' | 111.5° | 110.3° |
| C2' | C3' | H3' | 109.4° | 110.5° |
| C3' | C2' | H2' | 111.2° | 110.5° |
| C3' | C2' | H2'' | 111.2° | 110.5° |
| N9 | C4 | C5 | 105.4° | 106.0° |
| C4 | N9 | C8 | 108.9° | 107.5° |
| C4 | C5 | C6 | 119.3° | 118.3° |
| C4 | C5 | N7 | 109.1° | 107.1° |
| N1 | C6 | C5 | 120.3° | 118.6° |
| N1 | C6 | O6 | 121.7° | 120.7° |
| N9 | C8 | N7 | 109.3° | 110.0° |
| N9 | C8 | H8 | 125.4° | 125.0° |
| C6 | C5 | N7 | 131.6° | 134.6° |
| C5 | C6 | O6 | 118.0° | 120.7° |
| C5 | N7 | C8 | 107.3° | 109.4° |
| C6 | O6 | C1X | 123.7° | 117.0° |
| C5' | O5' | P | 118.9° | 123.0° |
| O5' | C5' | H5' | 105.7° | 109.4° |
| O5' | C5' | H5'' | 105.7° | 109.4° |
| N7 | C8 | H8 | 125.3° | 125.0° |
| O5' | P | OP2 | 111.2° | 109.5° |
| O5' | P | OP1 | 113.3° | 109.4° |
| O5' | P | OP3 | 103.0° | 109.5° |
| O6 | C1X | C2X | 117.2° | 109.5° |
| O6 | C1X | H1X1 | 107.5° | 109.5° |
| O6 | C1X | H1X2 | 107.5° | 109.5° |
| C1X | C2X | C3X | 117.6° | 109.5° |
| C2X | C1X | H1X1 | 107.5° | 109.5° |
| C2X | C1X | H1X2 | 107.5° | 109.4° |
| C1X | C2X | H2X1 | 107.4° | 109.5° |
| C1X | C2X | H2X2 | 107.4° | 109.4° |
| C3X | C2X | H2X1 | 107.4° | 109.5° |
| C3X | C2X | H2X2 | 107.4° | 109.4° |
| C2X | C3X | H3X1 | 109.5° | 109.5° |
| C2X | C3X | H3X2 | 109.5° | 109.4° |
| C2X | C3X | H3X3 | 109.5° | 109.5° |
| OP2 | P | OP1 | 112.1° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP2 | P | OP3 | 11.1° | 109.5° |
| OP1 | P | OP3 | 110.6° | 109.5° |
| H5' | C5' | H5'' | 109.5° | 109.5° |
| H2' | C2' | H2'' | 109.4° | 110.5° |
| HN1 | N2 | HN2 | 109.5° | 120.0° |
| H1X1 | C1X | H1X2 | 109.5° | 109.5° |
| H2X1 | C2X | H2X2 | 109.5° | 109.5° |
| H3X1 | C3X | H3X2 | 109.5° | 109.5° |
| H3X1 | C3X | H3X3 | 109.5° | 109.6° |
| H3X2 | C3X | H3X3 | 109.5° | 109.5° |
| P | OP3 | HOP3 | 90.0° | 114.1° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N2 | C2 | N3 | N1 | 179.6° | 179.3° |
| N2 | C2 | N3 | C4 | 179.1° | 179.6° |
| N2 | C2 | N1 | C6 | 179.2° | 180.0° |
| C2 | N2 | HN1 | HN2 | 120.0° | 180.0° |
| O3' | C3' | C2' | C1' | 91.6° | 118.6° |
| O3' | C3' | C4' | O4' | 107.0° | 142.6° |
| O3' | C3' | C4' | C2' | 120.0° | 118.6° |
| O3' | C3' | C4' | H3' | 122.5° | 122.7° |
| O3' | C3' | C4' | C5' | 135.3° | 98.5° |
| O3' | C3' | C2' | H3' | 122.3° | 122.7° |
| O3' | C3' | C4' | H4' | 14.1° | 23.6° |
| O3' | C3' | C2' | H2' | 27.3° | 122.7° |
| O3' | C3' | C2' | H2'' | 149.5° | 0.1° |
| C2 | N3 | C4 | N9 | 179.9° | 179.1° |
| C2 | N3 | C4 | C5 | 0.3° | 0.7° |
| N3 | C2 | N1 | C6 | 0.5° | 0.7° |
| N3 | C2 | N2 | HN1 | 0.0° | 179.3° |
| N3 | C2 | N2 | HN2 | 120.0° | 0.7° |
| C4 | N3 | C2 | N1 | 0.6° | 1.1° |
| N3 | C4 | N9 | C1' | 5.9° | 0.0° |
| N3 | C4 | N9 | C5 | 179.8° | 179.9° |
| N3 | C4 | N9 | C8 | 180.0° | 179.8° |
| N3 | C4 | C5 | C6 | 0.0° | 0.1° |
| N3 | C4 | C5 | N7 | 180.0° | 179.7° |
| C2 | N1 | C6 | C5 | 0.1° | 0.0° |
| C2 | N1 | C6 | O6 | 178.0° | 180.0° |
| N1 | C2 | N2 | HN1 | 179.7° | 0.0° |
| N1 | C2 | N2 | HN2 | 60.3° | 180.0° |
| O4' | C1' | N9 | C2' | 118.3° | 115.3° |
| O4' | C1' | N9 | H1' | 121.2° | 122.3° |
| O4' | C1' | C2' | H1' | 117.9° | 118.8° |
| C1' | O4' | C4' | C3' | 8.9° | 40.5° |
| C1' | O4' | C4' | C5' | 123.9° | 159.3° |
| O4' | C1' | C2' | C3' | 34.8° | 24.0° |
| O4' | C1' | N9 | C4 | 160.2° | 156.7° |
| O4' | C1' | N9 | C8 | 13.1° | 23.5° |
| C1' | O4' | C4' | H4' | 112.0° | 78.4° |
| O4' | C1' | C2' | H2' | 153.7° | 94.7° |
| O4' | C1' | C2' | H2'' | 84.1° | 142.7° |
| N9 | C1' | C2' | H1' | 120.8° | 122.4° |
| N9 | C1' | O4' | C4' | 149.4° | 159.3° |
| N9 | C1' | C2' | C3' | 156.2° | 142.8° |
| C1' | N9 | C4 | C8 | 174.1° | 179.8° |
| C1' | N9 | C4 | C5 | 173.9° | 179.8° |
| C1' | N9 | C8 | N7 | 174.3° | 180.0° |
| N9 | C1' | C2' | H2' | 84.9° | 24.1° |
| N9 | C1' | C2' | H2'' | 37.2° | 98.5° |
| C1' | N9 | C8 | H8 | 5.7° | 0.1° |
| C2' | C1' | O4' | C4' | 27.4° | 40.5° |
| C1' | C2' | C3' | C4' | 28.6° | 0.0° |
| C1' | C2' | C3' | H2' | 118.9° | 118.6° |
| C1' | C2' | C3' | H2'' | 118.9° | 118.7° |
| C2' | C1' | N9 | C4 | 81.4° | 87.9° |
| C2' | C1' | N9 | C8 | 105.2° | 91.8° |
| C1' | C2' | C3' | H3' | 146.1° | 118.7° |
| C1' | C2' | H2' | H2'' | 123.1° | 122.7° |
| O4' | C4' | C3' | C5' | 117.7° | 118.8° |
| O4' | C4' | C3' | H4' | 121.1° | 119.0° |
| O4' | C4' | C5' | H4' | 123.9° | 122.4° |
| O4' | C4' | C3' | C2' | 13.0° | 24.0° |
| O4' | C4' | C5' | O5' | 52.7° | 69.6° |
| O4' | C4' | C5' | H5' | 174.8° | 50.4° |
| O4' | C4' | C5' | H5'' | 69.3° | 170.4° |
| O4' | C4' | C3' | H3' | 130.5° | 94.7° |
| C4' | O4' | C1' | H1' | 89.7° | 78.4° |
| C3' | C4' | C5' | H4' | 120.7° | 122.2° |
| C4' | C3' | C2' | H3' | 117.5° | 118.7° |
| C3' | C4' | C5' | O5' | 168.1° | 175.0° |
| C3' | C4' | C5' | H5' | 69.9° | 65.0° |
| C3' | C4' | C5' | H5'' | 46.1° | 55.0° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | H2' | 147.5° | 118.6° |
| C4' | C3' | C2' | H2'' | 90.3° | 118.7° |
| C5' | C4' | C3' | C2' | 104.7° | 142.8° |
| C4' | C5' | O5' | H5' | 122.0° | 120.0° |
| C4' | C5' | O5' | H5'' | 122.0° | 120.0° |
| C4' | C5' | O5' | P | 127.8° | 180.0° |
| C4' | C5' | H5' | H5'' | 113.4° | 120.0° |
| C5' | C4' | C3' | H3' | 12.7° | 24.2° |
| C2' | C3' | C4' | H4' | 134.1° | 95.0° |
| C2' | C3' | O3' | HO3' | 63.3° | 65.4° |
| C3' | C2' | H2' | H2'' | 123.2° | 122.7° |
| C3' | C2' | C1' | H1' | 83.1° | 94.9° |
| N9 | C4 | C5 | C6 | 179.9° | 179.8° |
| N9 | C4 | C5 | N7 | 0.2° | 0.4° |
| C4 | N9 | C8 | N7 | 0.2° | 0.2° |
| C4 | N9 | C1' | H1' | 39.0° | 34.5° |
| C4 | N9 | C8 | H8 | 179.8° | 179.7° |
| C4 | C5 | C6 | N1 | 0.1° | 0.3° |
| C5 | C4 | N9 | C8 | 0.2° | 0.4° |
| C4 | C5 | C6 | N7 | 180.0° | 179.7° |
| C4 | C5 | C6 | O6 | 177.9° | 179.7° |
| C4 | C5 | N7 | C8 | 0.1° | 0.3° |
| N1 | C6 | C5 | O6 | 178.0° | 179.9° |
| N1 | C6 | C5 | N7 | 179.9° | 180.0° |
| N1 | C6 | O6 | C1X | 2.7° | 0.0° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| C8 | N9 | C1' | H1' | 134.4° | 145.8° |
| C6 | C5 | N7 | C8 | 180.0° | 180.0° |
| C5 | C6 | O6 | C1X | 179.4° | 180.0° |
| N7 | C5 | C6 | O6 | 2.2° | 0.1° |
| C5 | N7 | C8 | H8 | 179.9° | 180.0° |
| C6 | O6 | C1X | C2X | 168.2° | 180.0° |
| C6 | O6 | C1X | H1X1 | 47.1° | 60.0° |
| C6 | O6 | C1X | H1X2 | 70.7° | 60.0° |
| C5' | O5' | P | OP2 | 110.7° | 65.0° |
| C5' | O5' | P | OP1 | 16.7° | 55.0° |
| O5' | C5' | H5' | H5'' | 113.4° | 120.0° |
| O5' | C5' | C4' | H4' | 71.2° | 52.8° |
| C5' | O5' | P | OP3 | 102.9° | 175.0° |
| O5' | P | OP2 | OP1 | 128.0° | 120.0° |
| O5' | P | OP2 | OP3 | 43.6° | 120.0° |
| O5' | P | OP1 | OP3 | 115.1° | 120.0° |
| O5' | P | OP2 | HOP2 | 128.0° | 60.0° |
| P | O5' | C5' | H5' | 110.2° | 60.0° |
| P | O5' | C5' | H5'' | 5.8° | 60.0° |
| O5' | P | OP3 | HOP3 | 90.0° | 180.0° |
| O6 | C1X | C2X | H1X1 | 121.1° | 120.0° |
| O6 | C1X | C2X | H1X2 | 121.1° | 120.0° |
| O6 | C1X | C2X | C3X | 150.3° | 180.0° |
| O6 | C1X | H1X1 | H1X2 | 116.5° | 120.0° |
| O6 | C1X | C2X | H2X1 | 29.1° | 59.9° |
| O6 | C1X | C2X | H2X2 | 88.5° | 60.0° |
| C1X | C2X | C3X | H2X1 | 121.2° | 120.1° |
| C1X | C2X | C3X | H2X2 | 121.2° | 119.9° |
| C2X | C1X | H1X1 | H1X2 | 116.5° | 119.9° |
| C1X | C2X | H2X1 | H2X2 | 116.3° | 119.9° |
| C1X | C2X | C3X | H3X1 | 180.0° | 59.9° |
| C1X | C2X | C3X | H3X2 | 60.0° | 60.0° |
| C1X | C2X | C3X | H3X3 | 60.0° | 180.0° |
| C3X | C2X | C1X | H1X1 | 88.6° | 59.9° |
| C3X | C2X | C1X | H1X2 | 29.2° | 60.0° |
| C3X | C2X | H2X1 | H2X2 | 116.3° | 120.0° |
| C2X | C3X | H3X1 | H3X2 | 120.0° | 119.9° |
| C2X | C3X | H3X1 | H3X3 | 120.0° | 120.0° |
| C2X | C3X | H3X2 | H3X3 | 120.0° | 120.0° |
| OP2 | P | OP1 | OP3 | 11.8° | 120.0° |
| OP2 | P | OP3 | HOP3 | 90.0° | 60.0° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | OP3 | HOP3 | 90.0° | 60.0° |
| HOP2 | OP2 | P | OP3 | 84.5° | 60.0° |
| H5' | C5' | C4' | H4' | 50.9° | 172.8° |
| H5'' | C5' | C4' | H4' | 166.8° | 67.2° |
| H4' | C4' | C3' | H3' | 108.4° | 146.4° |
| H3' | C3' | O3' | HO3' | 58.2° | 57.3° |
| H3' | C3' | C2' | H2' | 95.0° | 0.0° |
| H3' | C3' | C2' | H2'' | 27.2° | 122.6° |
| H2' | C2' | C1' | H1' | 35.8° | 146.5° |
| H2'' | C2' | C1' | H1' | 158.0° | 23.8° |
| H1X1 | C1X | C2X | H2X1 | 150.3° | 180.0° |
| H1X1 | C1X | C2X | H2X2 | 32.6° | 60.0° |
| H1X2 | C1X | C2X | H2X1 | 92.0° | 60.0° |
| H1X2 | C1X | C2X | H2X2 | 150.3° | 180.0° |
| H2X1 | C2X | C3X | H3X1 | 58.8° | 180.0° |
| H2X1 | C2X | C3X | H3X2 | 178.9° | 60.1° |
| H2X1 | C2X | C3X | H3X3 | 61.2° | 59.9° |
| H2X2 | C2X | C3X | H3X1 | 58.8° | 60.0° |
| H2X2 | C2X | C3X | H3X2 | 61.2° | 179.9° |
| H2X2 | C2X | C3X | H3X3 | 178.8° | 60.1° |
| H3X1 | C3X | H3X2 | H3X3 | 120.0° | 120.1° |
