6OG
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | OP1 | doub | 1.48Å | 1.50Å | |
| P | OP2 | sing | 1.61Å | 1.50Å | |
| P | O5' | sing | 1.61Å | 1.60Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| N9 | C4 | sing | 1.37Å | 1.36Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.37Å | Aromatic |
| N9 | C1' | sing | 1.46Å | 1.46Å | |
| C4 | N3 | sing | 1.33Å | 1.35Å | Aromatic |
| C4 | C5 | doub | 1.41Å | 1.37Å | Aromatic |
| N3 | C2 | doub | 1.32Å | 1.31Å | Aromatic |
| C2 | N2 | sing | 1.39Å | 1.34Å | |
| C2 | N1 | sing | 1.33Å | 1.37Å | Aromatic |
| N2 | HN21 | sing | 0.97Å | 1.00Å | |
| N2 | HN22 | sing | 0.97Å | 1.00Å | |
| N1 | C6 | doub | 1.33Å | 1.39Å | Aromatic |
| C6 | O6 | sing | 1.35Å | 1.35Å | |
| C6 | C5 | sing | 1.40Å | 1.39Å | Aromatic |
| O6 | C | sing | 1.43Å | 1.43Å | |
| C5 | N7 | sing | 1.36Å | 1.38Å | Aromatic |
| N7 | C8 | doub | 1.30Å | 1.30Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C2' | C1' | sing | 1.54Å | 1.51Å | |
| C2' | C3' | sing | 1.55Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C2' | H2'' | sing | 1.09Å | 1.10Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | C3' | sing | 1.55Å | 1.51Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C3' | O3' | sing | 1.43Å | 1.40Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C | H1 | sing | 1.09Å | 1.10Å | |
| C | H2 | sing | 1.09Å | 1.10Å | |
| C | H3 | sing | 1.09Å | 1.10Å | |
| P | OP3 | sing | 1.61Å | 1.72Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP1 | P | OP2 | 119.7° | 109.5° |
| OP1 | P | O5' | 108.2° | 109.5° |
| OP1 | P | OP3 | 101.3° | 109.5° |
| OP2 | P | O5' | 109.5° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| OP2 | P | OP3 | 99.7° | 109.4° |
| P | O5' | C5' | 119.7° | 123.0° |
| O5' | P | OP3 | 118.7° | 109.5° |
| O5' | C5' | C4' | 110.5° | 109.5° |
| O5' | C5' | H5' | 109.1° | 109.5° |
| O5' | C5' | H5'' | 109.2° | 109.5° |
| C4 | N9 | C8 | 106.5° | 107.4° |
| C4 | N9 | C1' | 125.4° | 126.3° |
| N9 | C4 | N3 | 125.7° | 134.8° |
| N9 | C4 | C5 | 105.5° | 106.0° |
| C8 | N9 | C1' | 128.0° | 126.3° |
| N9 | C8 | N7 | 113.0° | 110.0° |
| N9 | C8 | H8 | 123.5° | 125.0° |
| N9 | C1' | C2' | 115.8° | 110.4° |
| N9 | C1' | O4' | 107.7° | 110.4° |
| N9 | C1' | H1' | 105.5° | 110.3° |
| N3 | C4 | C5 | 128.8° | 119.2° |
| C4 | N3 | C2 | 111.8° | 120.5° |
| C4 | C5 | C6 | 118.9° | 118.3° |
| C4 | C5 | N7 | 110.8° | 107.2° |
| N3 | C2 | N2 | 119.6° | 118.8° |
| N3 | C2 | N1 | 123.5° | 122.3° |
| N2 | C2 | N1 | 116.9° | 118.8° |
| C2 | N2 | HN21 | 109.5° | 120.0° |
| C2 | N2 | HN22 | 109.5° | 120.0° |
| C2 | N1 | C6 | 125.2° | 121.1° |
| HN21 | N2 | HN22 | 109.5° | 120.0° |
| N1 | C6 | O6 | 120.1° | 120.7° |
| N1 | C6 | C5 | 111.7° | 118.6° |
| O6 | C6 | C5 | 128.2° | 120.7° |
| C6 | O6 | C | 120.2° | 117.0° |
| C6 | C5 | N7 | 130.3° | 134.6° |
| O6 | C | H1 | 109.5° | 109.5° |
| O6 | C | H2 | 109.5° | 109.5° |
| O6 | C | H3 | 109.5° | 109.5° |
| C5 | N7 | C8 | 104.2° | 109.4° |
| N7 | C8 | H8 | 123.5° | 125.0° |
| C1' | C2' | C3' | 101.6° | 104.1° |
| C1' | C2' | H2' | 112.2° | 110.5° |
| C1' | C2' | H2'' | 112.2° | 110.5° |
| C2' | C1' | O4' | 106.5° | 104.8° |
| C2' | C1' | H1' | 106.7° | 110.3° |
| C3' | C2' | H2' | 112.2° | 110.6° |
| C3' | C2' | H2'' | 112.2° | 110.5° |
| C2' | C3' | C4' | 103.0° | 104.0° |
| C2' | C3' | O3' | 110.5° | 110.5° |
| C2' | C3' | H3' | 112.7° | 110.5° |
| H2' | C2' | H2'' | 106.6° | 110.5° |
| C4' | C5' | H5' | 109.1° | 109.5° |
| C4' | C5' | H5'' | 109.1° | 109.5° |
| C5' | C4' | O4' | 109.3° | 110.4° |
| C5' | C4' | C3' | 112.1° | 110.3° |
| C5' | C4' | H4' | 106.4° | 110.3° |
| H5' | C5' | H5'' | 109.8° | 109.5° |
| O4' | C4' | C3' | 104.9° | 104.8° |
| O4' | C4' | H4' | 113.5° | 110.4° |
| C4' | O4' | C1' | 110.6° | 105.3° |
| C3' | C4' | H4' | 110.8° | 110.5° |
| C4' | C3' | O3' | 108.4° | 110.5° |
| C4' | C3' | H3' | 114.6° | 110.6° |
| O4' | C1' | H1' | 114.9° | 110.5° |
| O3' | C3' | H3' | 107.6° | 110.6° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| H1 | C | H2 | 109.5° | 109.5° |
| H1 | C | H3 | 109.5° | 109.5° |
| H2 | C | H3 | 109.5° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP1 | P | OP2 | O5' | 125.7° | 120.0° |
| OP1 | P | OP2 | OP3 | 109.1° | 120.0° |
| OP1 | P | O5' | OP3 | 114.5° | 120.1° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | O5' | C5' | 10.9° | 55.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 60.0° |
| OP2 | P | O5' | OP3 | 113.5° | 120.0° |
| OP2 | P | O5' | C5' | 121.1° | 65.0° |
| OP2 | P | OP3 | HOP3 | 123.2° | 60.0° |
| O5' | P | OP2 | HOP2 | 125.6° | 60.0° |
| P | O5' | C5' | C4' | 157.6° | 180.0° |
| P | O5' | C5' | H5' | 37.6° | 60.0° |
| P | O5' | C5' | H5'' | 82.4° | 60.0° |
| O5' | P | OP3 | HOP3 | 118.1° | 180.0° |
| HOP2 | OP2 | P | OP3 | 109.1° | 60.0° |
| O5' | C5' | C4' | H5' | 120.0° | 120.0° |
| O5' | C5' | C4' | H5'' | 120.0° | 120.0° |
| O5' | C5' | H5' | H5'' | 119.6° | 120.0° |
| O5' | C5' | C4' | O4' | 72.1° | 66.5° |
| O5' | C5' | C4' | C3' | 43.8° | 178.2° |
| O5' | C5' | C4' | H4' | 165.0° | 55.9° |
| C5' | O5' | P | OP3 | 125.4° | 175.0° |
| C4 | N9 | C8 | C1' | 179.3° | 179.7° |
| N9 | C4 | N3 | C5 | 179.4° | 179.9° |
| N9 | C4 | N3 | C2 | 179.2° | 179.9° |
| N9 | C4 | C5 | C6 | 179.8° | 180.0° |
| N9 | C4 | C5 | N7 | 0.1° | 0.0° |
| C4 | N9 | C8 | N7 | 0.4° | 0.0° |
| C4 | N9 | C8 | H8 | 179.6° | 180.0° |
| C4 | N9 | C1' | C2' | 135.6° | 85.0° |
| C4 | N9 | C1' | O4' | 105.3° | 159.6° |
| C4 | N9 | C1' | H1' | 17.9° | 37.2° |
| C8 | N9 | C4 | N3 | 179.8° | 179.9° |
| C8 | N9 | C4 | C5 | 0.3° | 0.1° |
| N9 | C8 | N7 | C5 | 0.3° | 0.0° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| C8 | N9 | C1' | C2' | 45.2° | 95.4° |
| C8 | N9 | C1' | O4' | 73.9° | 20.0° |
| C8 | N9 | C1' | H1' | 162.9° | 142.5° |
| C1' | N9 | C4 | N3 | 0.5° | 0.4° |
| C1' | N9 | C4 | C5 | 179.0° | 179.7° |
| C1' | N9 | C8 | N7 | 178.9° | 179.7° |
| C1' | N9 | C8 | H8 | 1.1° | 0.3° |
| N9 | C1' | C2' | O4' | 119.8° | 118.8° |
| N9 | C1' | C2' | H1' | 117.0° | 122.2° |
| N9 | C1' | C2' | C3' | 149.9° | 142.8° |
| N9 | C1' | C2' | H2' | 90.1° | 98.5° |
| N9 | C1' | C2' | H2'' | 29.9° | 24.2° |
| N9 | C1' | O4' | C4' | 136.9° | 159.4° |
| N9 | C1' | O4' | H1' | 117.2° | 122.3° |
| C4 | N3 | C2 | N2 | 179.6° | 180.0° |
| C4 | N3 | C2 | N1 | 0.4° | 0.0° |
| N3 | C4 | C5 | C6 | 0.3° | 0.1° |
| N3 | C4 | C5 | N7 | 179.7° | 180.0° |
| C5 | C4 | N3 | C2 | 0.2° | 0.0° |
| C4 | C5 | C6 | N1 | 0.5° | 0.1° |
| C4 | C5 | C6 | O6 | 179.5° | 180.0° |
| C4 | C5 | C6 | N7 | 179.9° | 180.0° |
| C4 | C5 | N7 | C8 | 0.1° | 0.0° |
| N3 | C2 | N2 | N1 | 180.0° | 180.0° |
| N3 | C2 | N2 | HN21 | 0.0° | 0.1° |
| N3 | C2 | N2 | HN22 | 120.0° | 180.0° |
| N3 | C2 | N1 | C6 | 0.1° | 0.0° |
| C2 | N2 | HN21 | HN22 | 120.0° | 179.9° |
| N2 | C2 | N1 | C6 | 179.8° | 180.0° |
| N1 | C2 | N2 | HN21 | 180.0° | 180.0° |
| N1 | C2 | N2 | HN22 | 60.0° | 0.0° |
| C2 | N1 | C6 | O6 | 179.6° | 180.0° |
| C2 | N1 | C6 | C5 | 0.3° | 0.1° |
| N1 | C6 | O6 | C5 | 180.0° | 180.0° |
| N1 | C6 | O6 | C | 0.2° | 0.0° |
| N1 | C6 | C5 | N7 | 179.4° | 180.0° |
| O6 | C6 | C5 | N7 | 0.6° | 0.0° |
| C6 | O6 | C | H1 | 180.0° | 60.0° |
| C6 | O6 | C | H2 | 60.0° | 60.0° |
| C6 | O6 | C | H3 | 60.0° | 180.0° |
| C5 | C6 | O6 | C | 179.9° | 180.0° |
| C6 | C5 | N7 | C8 | 180.0° | 180.0° |
| O6 | C | H1 | H2 | 120.0° | 120.0° |
| O6 | C | H1 | H3 | 120.0° | 120.0° |
| O6 | C | H2 | H3 | 120.0° | 120.0° |
| C5 | N7 | C8 | H8 | 179.7° | 180.0° |
| C1' | C2' | C3' | H2' | 120.0° | 118.7° |
| C1' | C2' | C3' | H2'' | 120.0° | 118.6° |
| C1' | C2' | H2' | H2'' | 123.2° | 122.7° |
| C2' | C1' | O4' | C4' | 12.1° | 40.5° |
| C1' | C2' | C3' | C4' | 36.1° | 0.0° |
| C2' | C1' | O4' | H1' | 117.9° | 118.9° |
| C1' | C2' | C3' | O3' | 79.5° | 118.6° |
| C1' | C2' | C3' | H3' | 160.1° | 118.6° |
| C3' | C2' | H2' | H2'' | 123.2° | 122.6° |
| C2' | C3' | C4' | C5' | 88.7° | 142.8° |
| C2' | C3' | C4' | O4' | 29.9° | 24.0° |
| C2' | C3' | C4' | O3' | 117.1° | 118.6° |
| C2' | C3' | C4' | H3' | 122.7° | 118.7° |
| C2' | C3' | C4' | H4' | 152.6° | 94.9° |
| C3' | C2' | C1' | O4' | 30.1° | 24.0° |
| C3' | C2' | C1' | H1' | 93.1° | 95.0° |
| C2' | C3' | O3' | H3' | 123.4° | 122.7° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.6° |
| H2' | C2' | C3' | C4' | 156.1° | 118.6° |
| H2' | C2' | C1' | O4' | 150.1° | 142.7° |
| H2' | C2' | C1' | H1' | 26.9° | 23.7° |
| H2' | C2' | C3' | O3' | 40.5° | 0.1° |
| H2' | C2' | C3' | H3' | 79.9° | 122.7° |
| H2'' | C2' | C3' | C4' | 83.9° | 118.7° |
| H2'' | C2' | C1' | O4' | 89.9° | 94.6° |
| H2'' | C2' | C1' | H1' | 146.9° | 146.4° |
| H2'' | C2' | C3' | O3' | 160.5° | 122.7° |
| H2'' | C2' | C3' | H3' | 40.1° | 0.0° |
| C4' | C5' | H5' | H5'' | 119.6° | 120.0° |
| C5' | C4' | O4' | C3' | 120.4° | 118.8° |
| C5' | C4' | O4' | H4' | 118.6° | 122.3° |
| C5' | C4' | C3' | H4' | 118.7° | 122.2° |
| C5' | C4' | O4' | C1' | 109.0° | 159.3° |
| C5' | C4' | C3' | O3' | 154.2° | 98.6° |
| C5' | C4' | C3' | H3' | 34.0° | 24.2° |
| H5' | C5' | C4' | O4' | 167.9° | 53.5° |
| H5' | C5' | C4' | C3' | 76.2° | 61.8° |
| H5' | C5' | C4' | H4' | 45.0° | 175.8° |
| H5'' | C5' | C4' | O4' | 47.9° | 173.5° |
| H5'' | C5' | C4' | C3' | 163.8° | 58.2° |
| H5'' | C5' | C4' | H4' | 75.0° | 64.1° |
| O4' | C4' | C3' | H4' | 122.8° | 119.0° |
| C4' | O4' | C1' | H1' | 105.8° | 78.3° |
| O4' | C4' | C3' | O3' | 87.2° | 142.6° |
| O4' | C4' | C3' | H3' | 152.6° | 94.6° |
| C3' | C4' | O4' | C1' | 11.3° | 40.6° |
| C4' | C3' | O3' | H3' | 124.5° | 122.7° |
| C4' | C3' | O3' | HO3' | 67.9° | 176.1° |
| H4' | C4' | O4' | C1' | 132.4° | 78.4° |
| H4' | C4' | C3' | O3' | 35.6° | 23.7° |
| H4' | C4' | C3' | H3' | 84.6° | 146.4° |
| H3' | C3' | O3' | HO3' | 56.6° | 61.1° |
| H1 | C | H2 | H3 | 120.0° | 120.0° |
