Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NJ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.38Å1.42ÅAromatic
C1C6sing1.38Å1.43ÅAromatic
C2C3sing1.38Å1.46ÅAromatic
C3C4doub1.38Å1.47ÅAromatic
C4C5sing1.38Å1.41ÅAromatic
C4C7sing1.51Å1.56Å
C5C6doub1.38Å1.42ÅAromatic
C7C8sing1.53Å1.48Å
C8C9sing1.51Å1.50Å
C9C10sing1.46Å1.47ÅAromatic
C9N17doub1.30Å1.39ÅAromatic
C10C11doub1.40Å1.51ÅAromatic
C10C15sing1.41Å1.46ÅAromatic
C11C12sing1.37Å1.46ÅAromatic
C12C13doub1.39Å1.45ÅAromatic
C13C14sing1.37Å1.46ÅAromatic
C14C15doub1.39Å1.48ÅAromatic
C15N16sing1.37Å1.47ÅAromatic
N16N17sing1.40Å1.38ÅAromatic
C1H1sing1.08Å1.08Å
C2H2sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C11H11sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
N16HN16sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C6118.5°120.0°
C1C2C3118.9°120.0°
C2C1H1120.8°120.0°
C1C2H2120.5°120.0°
C1C6C5121.5°120.0°
C6C1H1120.7°119.9°
C1C6H6119.2°120.1°
C2C3C4123.1°120.0°
C3C2H2120.5°120.0°
C2C3H3118.4°120.0°
C3C4C5114.4°120.0°
C3C4C7128.3°120.0°
C4C3H3118.4°120.0°
C5C4C7117.3°120.0°
C4C5C6123.5°120.0°
C4C5H5118.2°120.0°
C4C7C8111.1°109.5°
C4C7H7109.1°109.4°
C4C7H7A109.1°109.4°
C6C5H5118.3°120.0°
C5C6H6119.3°120.0°
C7C8C9115.9°109.5°
C8C7H7109.1°109.5°
C8C7H7A109.1°109.5°
C7C8H8107.9°109.5°
C7C8H8A107.9°109.5°
C8C9C10118.9°126.1°
C8C9N17126.6°126.1°
C9C8H8107.9°109.4°
C9C8H8A107.8°109.5°
C10C9N17114.6°107.8°
C9C10C11135.8°134.0°
C9C10C15103.1°106.3°
C9N17N16103.4°110.1°
C11C10C15121.1°119.7°
C10C11C12115.8°119.7°
C10C11H11122.1°120.2°
C10C15C14121.5°119.4°
C10C15N16104.8°106.8°
C11C12C13122.7°120.6°
C12C11H11122.0°120.1°
C11C12H12118.7°119.7°
C12C13C14122.1°120.8°
C13C12H12118.6°119.7°
C12C13H13118.9°119.5°
C13C14C15116.8°119.8°
C14C13H13118.9°119.6°
C13C14H14121.6°120.0°
C14C15N16133.7°133.8°
C15C14H14121.6°120.1°
C15N16N17114.1°109.0°
C15N16HN16122.9°125.5°
N17N16HN16123.0°125.4°
H7C7H7A109.5°109.5°
H8C8H8A109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C6H1180.0°179.7°
C1C2C3H2180.0°180.0°
C1C2C3C40.2°0.0°
C2C1C6C50.4°0.1°
C1C2C3H3179.8°180.0°
C2C1C6H6179.6°180.0°
C6C1C2C30.0°0.0°
C1C6C5C40.5°0.2°
C1C6C5H6180.0°180.0°
C6C1C2H2180.0°180.0°
C1C6C5H5179.4°179.9°
C2C3C4H3180.0°180.0°
C2C3C4C50.0°0.0°
C2C3C4C7179.8°180.0°
C3C2C1H1180.0°179.8°
C3C4C5C7179.8°180.0°
C3C4C5C60.3°0.1°
C3C4C7C822.5°90.0°
C4C3C2H2179.9°180.0°
C3C4C5H5179.6°179.9°
C3C4C7H7142.8°150.0°
C3C4C7H7A97.7°30.0°
C4C5C6H5180.0°179.8°
C5C4C7C8157.7°89.9°
C5C4C3H3180.0°179.9°
C4C5C6H6179.4°179.9°
C5C4C7H737.4°30.0°
C5C4C7H7A82.1°150.0°
C7C4C5C6179.5°179.9°
C4C7C8H7120.2°120.0°
C4C7C8H7A120.2°120.0°
C4C7C8C9118.8°180.0°
C7C4C3H30.2°0.0°
C7C4C5H50.6°0.1°
C4C7H7H7A119.3°120.0°
C4C7C8H82.2°60.1°
C4C7C8H8A120.3°60.0°
C5C6C1H1179.6°179.7°
C7C8C9H8121.0°119.9°
C7C8C9H8A120.9°120.0°
C7C8C9C1098.9°89.9°
C7C8C9N1781.8°90.3°
C8C7H7H7A119.3°120.1°
C7C8H8H8A117.1°120.1°
C8C9C10N17179.4°179.8°
C8C9C10C110.3°0.1°
C8C9C10C15179.5°180.0°
C8C9N17N16179.7°179.8°
C9C8C7H7121.0°60.0°
C9C8C7H7A1.5°60.0°
C9C8H8H8A117.1°120.0°
C9C10C11C15179.7°179.9°
C9C10C11C12178.9°179.9°
C9C10C15C14179.7°180.0°
C9C10C15N160.3°0.0°
C10C9N17N160.3°0.4°
C10C9C8H8140.2°30.0°
C10C9C8H8A22.1°150.0°
C9C10C11H111.1°0.1°
N17C9C10C11179.7°179.7°
N17C9C10C150.0°0.2°
C9N17N16C150.5°0.4°
N17C9C8H839.2°149.7°
N17C9C8H8A157.3°29.7°
C9N17N16HN16179.4°179.9°
C10C11C12H11180.0°180.0°
C10C11C12C130.5°0.0°
C11C10C15C140.1°0.0°
C11C10C15N16179.9°180.0°
C10C11C12H12179.5°180.0°
C15C10C11C120.8°0.0°
C10C15C14C130.8°0.0°
C10C15C14N16180.0°180.0°
C10C15N16N170.5°0.2°
C15C10C11H11179.2°180.0°
C10C15C14H14179.2°180.0°
C10C15N16HN16179.4°180.0°
C11C12C13H12180.0°180.0°
C11C12C13C140.4°0.0°
C11C12C13H13179.6°179.9°
C12C13C14H13180.0°180.0°
C12C13C14C151.0°0.0°
C13C12C11H11179.5°180.0°
C12C13C14H14178.9°180.0°
C13C14C15H14180.0°180.0°
C13C14C15N16179.2°180.0°
C14C13C12H12179.6°180.0°
C14C15N16N17179.4°179.8°
C15C14C13H13179.0°179.9°
C14C15N16HN160.6°0.0°
C15N16N17HN16180.0°179.7°
N16C15C14H140.8°0.1°
H1C1C2H20.0°0.3°
H1C1C6H60.4°0.3°
H2C2C3H30.2°0.0°
H5C5C6H60.6°0.1°
H7C7C8H8118.1°180.0°
H7C7C8H8A0.1°60.0°
H7AC7C8H8122.4°59.9°
H7AC7C8H8A119.5°180.0°
H11C11C12H120.5°0.0°
H12C12C13H130.4°0.0°
H13C13C14H141.0°0.0°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon