6MZ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C4 | C5 | sing | 1.41Å | 1.39Å | Aromatic |
| C4 | N9 | sing | 1.37Å | 1.37Å | Aromatic |
| C2 | N3 | sing | 1.32Å | 1.34Å | Aromatic |
| C4 | N3 | doub | 1.33Å | 1.35Å | Aromatic |
| C2 | N1 | doub | 1.32Å | 1.35Å | Aromatic |
| C5 | C6 | doub | 1.40Å | 1.44Å | Aromatic |
| N1 | C6 | sing | 1.33Å | 1.36Å | Aromatic |
| C6 | N6 | sing | 1.38Å | 1.36Å | |
| N6 | C9 | sing | 1.46Å | 1.36Å | |
| C5 | N7 | sing | 1.35Å | 1.39Å | Aromatic |
| N9 | C8 | sing | 1.36Å | 1.37Å | Aromatic |
| N7 | C8 | doub | 1.30Å | 1.31Å | Aromatic |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C9 | H9C1 | sing | 1.09Å | 1.10Å | |
| C9 | H9C2 | sing | 1.09Å | 1.10Å | |
| C5' | H5'1 | sing | 1.09Å | 1.10Å | |
| C5' | H5'2 | sing | 1.09Å | 1.10Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HA | sing | 0.97Å | 0.95Å | |
| O3' | HB | sing | 0.97Å | 0.95Å | |
| O3P | H3P | sing | 0.97Å | 0.95Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| N9 | C1' | sing | 1.46Å | 1.46Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C1' | C2' | sing | 1.55Å | 1.53Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C2' | C3' | sing | 1.55Å | 1.52Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| O1P | P | sing | 1.61Å | 1.50Å | |
| O2P | P | doub | 1.48Å | 1.49Å | |
| O5' | P | sing | 1.61Å | 1.60Å | |
| P | O3P | sing | 1.61Å | 1.60Å | |
| C2 | H2 | sing | 1.08Å | 1.08Å | |
| O1P | H1P | sing | 0.97Å | 0.95Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N6 | H6 | sing | 0.97Å | 1.00Å | |
| C9 | H9 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C5 | C4 | N9 | 105.9° | 106.0° |
| C5 | C4 | N3 | 127.2° | 119.1° |
| C4 | C5 | C6 | 116.5° | 118.2° |
| C4 | C5 | N7 | 110.4° | 107.1° |
| N9 | C4 | N3 | 127.0° | 134.9° |
| C4 | N9 | C8 | 106.0° | 107.4° |
| C4 | N9 | C1' | 125.8° | 126.3° |
| C2 | N3 | C4 | 111.0° | 120.6° |
| N3 | C2 | N1 | 129.2° | 122.5° |
| N3 | C2 | H2 | 115.4° | 118.8° |
| C2 | N1 | C6 | 118.9° | 121.2° |
| N1 | C2 | H2 | 115.4° | 118.7° |
| C5 | C6 | N1 | 117.2° | 118.5° |
| C5 | C6 | N6 | 125.9° | 120.8° |
| C6 | C5 | N7 | 133.2° | 134.7° |
| N1 | C6 | N6 | 116.9° | 120.7° |
| C6 | N6 | C9 | 124.8° | 120.0° |
| C6 | N6 | H6 | 105.5° | 120.0° |
| N6 | C9 | H9C1 | 109.5° | 109.5° |
| N6 | C9 | H9C2 | 109.4° | 109.5° |
| C9 | N6 | H6 | 105.5° | 120.0° |
| N6 | C9 | H9 | 109.5° | 109.5° |
| C5 | N7 | C8 | 104.0° | 109.5° |
| N9 | C8 | N7 | 113.8° | 110.0° |
| C8 | N9 | C1' | 128.2° | 126.3° |
| N9 | C8 | H8 | 123.1° | 125.0° |
| N7 | C8 | H8 | 123.1° | 125.0° |
| O5' | C5' | H5'1 | 109.1° | 109.4° |
| O5' | C5' | H5'2 | 109.1° | 109.5° |
| O5' | C5' | C4' | 111.0° | 109.5° |
| C5' | O5' | P | 120.5° | 123.0° |
| H1' | C1' | N9 | 109.6° | 110.5° |
| H1' | C1' | O4' | 110.3° | 110.6° |
| H1' | C1' | C2' | 108.7° | 110.7° |
| H9C1 | C9 | H9C2 | 109.5° | 109.4° |
| H9C1 | C9 | H9 | 109.5° | 109.5° |
| H9C2 | C9 | H9 | 109.5° | 109.4° |
| H5'1 | C5' | H5'2 | 109.5° | 109.5° |
| H5'1 | C5' | C4' | 109.1° | 109.5° |
| H5'2 | C5' | C4' | 109.1° | 109.5° |
| H4' | C4' | C5' | 108.8° | 109.8° |
| H4' | C4' | O4' | 109.5° | 109.9° |
| H4' | C4' | C3' | 108.6° | 109.9° |
| H3' | C3' | C4' | 108.8° | 110.5° |
| H3' | C3' | C2' | 108.7° | 110.5° |
| H3' | C3' | O3' | 110.1° | 110.6° |
| H2' | C2' | C1' | 110.0° | 110.9° |
| H2' | C2' | O2' | 111.7° | 110.8° |
| H2' | C2' | C3' | 110.1° | 111.0° |
| HA | O2' | C2' | 109.5° | 114.0° |
| HB | O3' | C3' | 109.5° | 114.0° |
| H3P | O3P | P | 109.5° | 114.0° |
| C5' | C4' | O4' | 109.2° | 109.9° |
| C5' | C4' | C3' | 116.0° | 109.9° |
| C4' | O4' | C1' | 109.9° | 107.0° |
| O4' | C4' | C3' | 104.6° | 107.5° |
| N9 | C1' | O4' | 108.0° | 110.6° |
| N9 | C1' | C2' | 113.2° | 110.6° |
| O4' | C1' | C2' | 107.1° | 103.5° |
| C1' | C2' | O2' | 110.0° | 110.9° |
| C1' | C2' | C3' | 100.8° | 102.1° |
| O2' | C2' | C3' | 113.8° | 110.9° |
| C4' | C3' | C2' | 102.2° | 104.0° |
| C4' | C3' | O3' | 111.8° | 110.5° |
| C2' | C3' | O3' | 114.8° | 110.6° |
| O1P | P | O2P | 120.9° | 109.5° |
| O1P | P | O5' | 108.4° | 109.5° |
| O1P | P | O3P | 105.6° | 109.4° |
| P | O1P | H1P | 109.5° | 114.0° |
| O2P | P | O5' | 108.7° | 109.5° |
| O2P | P | O3P | 108.0° | 109.5° |
| O5' | P | O3P | 103.9° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C5 | C4 | N9 | N3 | 179.7° | 180.0° |
| C5 | C4 | N3 | C2 | 0.2° | 0.0° |
| C4 | C5 | C6 | N7 | 179.9° | 179.9° |
| C4 | C5 | C6 | N1 | 0.0° | 0.0° |
| C4 | C5 | C6 | N6 | 179.9° | 179.9° |
| C5 | C4 | N9 | C8 | 0.3° | 0.0° |
| C4 | C5 | N7 | C8 | 0.2° | 0.0° |
| C5 | C4 | N9 | C1' | 179.6° | 180.0° |
| N9 | C4 | N3 | C2 | 179.8° | 180.0° |
| N9 | C4 | C5 | C6 | 179.8° | 180.0° |
| N9 | C4 | C5 | N7 | 0.3° | 0.0° |
| C4 | N9 | C8 | C1' | 179.9° | 180.0° |
| C4 | N9 | C8 | N7 | 0.2° | 0.0° |
| C4 | N9 | C1' | H1' | 50.1° | 33.6° |
| C4 | N9 | C1' | O4' | 170.3° | 156.5° |
| C4 | N9 | C1' | C2' | 71.4° | 89.4° |
| C4 | N9 | C8 | H8 | 179.8° | 180.0° |
| N3 | C2 | N1 | H2 | 180.0° | 179.7° |
| N3 | C2 | N1 | C6 | 0.1° | 0.0° |
| C4 | N3 | C2 | N1 | 0.2° | 0.0° |
| N3 | C4 | C5 | C6 | 0.1° | 0.0° |
| N3 | C4 | C5 | N7 | 180.0° | 180.0° |
| N3 | C4 | N9 | C8 | 180.0° | 180.0° |
| N3 | C4 | N9 | C1' | 0.1° | 0.0° |
| C4 | N3 | C2 | H2 | 179.8° | 179.7° |
| C2 | N1 | C6 | C5 | 0.0° | 0.0° |
| C2 | N1 | C6 | N6 | 180.0° | 179.9° |
| C5 | C6 | N1 | N6 | 180.0° | 179.9° |
| C5 | C6 | N6 | C9 | 0.1° | 180.0° |
| C6 | C5 | N7 | C8 | 179.9° | 179.9° |
| C5 | C6 | N6 | H6 | 122.0° | 0.1° |
| N1 | C6 | N6 | C9 | 179.9° | 0.1° |
| N1 | C6 | C5 | N7 | 179.8° | 179.9° |
| C6 | N1 | C2 | H2 | 179.9° | 179.7° |
| N1 | C6 | N6 | H6 | 58.0° | 180.0° |
| C6 | N6 | C9 | H6 | 122.1° | 179.9° |
| N6 | C6 | C5 | N7 | 0.2° | 0.0° |
| C6 | N6 | C9 | H9C1 | 180.0° | 59.9° |
| C6 | N6 | C9 | H9C2 | 60.0° | 60.0° |
| C6 | N6 | C9 | H9 | 60.0° | 180.0° |
| N6 | C9 | H9C1 | H9C2 | 120.0° | 120.0° |
| N6 | C9 | H9C1 | H9 | 120.0° | 120.1° |
| N6 | C9 | H9C2 | H9 | 120.0° | 120.1° |
| C5 | N7 | C8 | N9 | 0.0° | 0.0° |
| C5 | N7 | C8 | H8 | 180.0° | 179.9° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| C8 | N9 | C1' | H1' | 129.9° | 146.4° |
| C8 | N9 | C1' | O4' | 9.7° | 23.5° |
| C8 | N9 | C1' | C2' | 108.6° | 90.6° |
| N7 | C8 | N9 | C1' | 179.7° | 180.0° |
| O5' | C5' | H5'1 | H5'2 | 119.3° | 120.0° |
| O5' | C5' | H5'1 | C4' | 121.4° | 120.0° |
| O5' | C5' | H5'2 | C4' | 121.4° | 120.1° |
| O5' | C5' | C4' | H4' | 171.4° | 54.3° |
| O5' | C5' | C4' | O4' | 69.1° | 66.7° |
| O5' | C5' | C4' | C3' | 48.7° | 175.3° |
| C5' | O5' | P | O1P | 42.2° | 65.0° |
| C5' | O5' | P | O2P | 175.3° | 55.0° |
| C5' | O5' | P | O3P | 69.8° | 175.0° |
| H1' | C1' | C2' | H2' | 94.6° | 160.3° |
| H1' | C1' | O4' | C4' | 127.3° | 78.6° |
| H1' | C1' | N9 | O4' | 120.2° | 122.9° |
| H1' | C1' | N9 | C2' | 121.5° | 123.0° |
| H1' | C1' | O4' | C2' | 118.1° | 118.6° |
| H1' | C1' | C2' | O2' | 28.8° | 36.7° |
| H1' | C1' | C2' | C3' | 149.2° | 81.4° |
| H9C1 | C9 | H9C2 | H9 | 120.0° | 119.9° |
| H9C1 | C9 | N6 | H6 | 57.9° | 120.0° |
| H9C2 | C9 | N6 | H6 | 177.9° | 120.1° |
| H5'1 | C5' | H5'2 | C4' | 119.3° | 120.0° |
| H5'1 | C5' | C4' | H4' | 51.2° | 174.3° |
| H5'1 | C5' | C4' | O4' | 170.7° | 53.3° |
| H5'1 | C5' | C4' | C3' | 71.5° | 64.8° |
| H5'1 | C5' | O5' | P | 57.8° | 60.0° |
| H5'2 | C5' | C4' | H4' | 68.4° | 65.8° |
| H5'2 | C5' | C4' | O4' | 51.1° | 173.3° |
| H5'2 | C5' | C4' | C3' | 168.9° | 55.2° |
| H5'2 | C5' | O5' | P | 61.8° | 60.0° |
| H4' | C4' | C3' | H3' | 162.4° | 123.8° |
| H4' | C4' | C5' | O4' | 119.5° | 121.0° |
| H4' | C4' | C5' | C3' | 122.7° | 121.0° |
| H4' | C4' | O4' | C3' | 116.2° | 119.5° |
| H4' | C4' | O4' | C1' | 100.5° | 93.1° |
| H4' | C4' | C3' | C2' | 82.7° | 117.6° |
| H4' | C4' | C3' | O3' | 40.6° | 1.1° |
| H3' | C3' | C2' | H2' | 39.6° | 21.4° |
| H3' | C3' | O3' | HB | 59.0° | 57.4° |
| H3' | C3' | C4' | C5' | 39.6° | 2.8° |
| H3' | C3' | C4' | O4' | 80.7° | 116.7° |
| H3' | C3' | C2' | C1' | 76.6° | 139.6° |
| H3' | C3' | C2' | O2' | 165.8° | 102.2° |
| H3' | C3' | C4' | C2' | 114.9° | 118.6° |
| H3' | C3' | C4' | O3' | 121.8° | 122.7° |
| H3' | C3' | C2' | O3' | 123.8° | 122.8° |
| H2' | C2' | O2' | HA | 57.6° | 56.4° |
| H2' | C2' | C1' | N9 | 27.4° | 37.3° |
| H2' | C2' | C1' | O4' | 146.3° | 81.2° |
| H2' | C2' | C1' | O2' | 123.4° | 123.5° |
| H2' | C2' | C1' | C3' | 116.2° | 118.3° |
| H2' | C2' | O2' | C3' | 125.4° | 123.7° |
| H2' | C2' | C3' | C4' | 154.5° | 97.2° |
| H2' | C2' | C3' | O3' | 84.2° | 144.2° |
| HA | O2' | C2' | C1' | 180.0° | 180.0° |
| HA | O2' | C2' | C3' | 67.8° | 67.3° |
| HB | O3' | C3' | C4' | 180.0° | 180.0° |
| HB | O3' | C3' | C2' | 64.1° | 65.4° |
| H3P | O3P | P | O1P | 130.6° | 60.0° |
| H3P | O3P | P | O2P | 0.0° | 59.9° |
| H3P | O3P | P | O5' | 115.3° | 180.0° |
| C5' | C4' | O4' | C3' | 124.7° | 119.5° |
| C5' | C4' | O4' | C1' | 140.5° | 146.0° |
| C5' | C4' | C3' | C2' | 154.5° | 121.4° |
| C5' | C4' | C3' | O3' | 82.2° | 119.9° |
| C4' | C5' | O5' | P | 178.0° | 180.0° |
| C4' | O4' | C1' | N9 | 112.9° | 158.6° |
| C4' | O4' | C1' | C2' | 9.2° | 40.0° |
| O4' | C4' | C3' | C2' | 34.2° | 1.9° |
| O4' | C4' | C3' | O3' | 157.5° | 120.6° |
| N9 | C1' | O4' | C2' | 122.1° | 118.5° |
| N9 | C1' | C2' | O2' | 150.9° | 86.2° |
| N9 | C1' | C2' | C3' | 88.8° | 155.6° |
| C1' | N9 | C8 | H8 | 0.3° | 0.0° |
| O4' | C1' | C2' | O2' | 90.3° | 155.3° |
| C1' | O4' | C4' | C3' | 15.8° | 26.4° |
| O4' | C1' | C2' | C3' | 30.1° | 37.1° |
| C1' | C2' | O2' | C3' | 112.2° | 112.7° |
| C1' | C2' | C3' | C4' | 38.3° | 21.0° |
| C1' | C2' | C3' | O3' | 159.6° | 97.6° |
| O2' | C2' | C3' | C4' | 79.3° | 139.2° |
| O2' | C2' | C3' | O3' | 42.0° | 20.6° |
| C4' | C3' | C2' | O3' | 121.3° | 118.6° |
| O1P | P | O2P | O5' | 126.2° | 120.0° |
| O1P | P | O2P | O3P | 121.6° | 119.9° |
| O1P | P | O5' | O3P | 112.0° | 119.9° |
| O2P | P | O5' | O3P | 114.9° | 120.0° |
| O2P | P | O1P | H1P | 0.0° | 180.0° |
| O5' | P | O1P | H1P | 126.3° | 59.9° |
| O3P | P | O1P | H1P | 122.8° | 60.0° |
| H6 | N6 | C9 | H9 | 62.1° | 0.1° |
