Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6L5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3N1doub1.32Å1.34ÅAromatic
C3Nsing1.32Å1.34ÅAromatic
N1Csing1.33Å1.33ÅAromatic
O15C6sing1.43Å1.42Å
NC2doub1.33Å1.34ÅAromatic
C6C5sing1.54Å1.53Å
C6C7sing1.54Å1.52Å
CC1doub1.41Å1.39ÅAromatic
CN3sing1.37Å1.37ÅAromatic
C2N2sing1.38Å1.33Å
C2C1sing1.41Å1.41ÅAromatic
O14C7sing1.43Å1.43Å
C5N3sing1.46Å1.47Å
C5Osing1.44Å1.42Å
C1N4sing1.36Å1.38ÅAromatic
C7C8sing1.55Å1.54Å
N3C4sing1.36Å1.37ÅAromatic
OC8sing1.44Å1.44Å
C8C9sing1.51Å1.51Å
C4N4doub1.30Å1.31ÅAromatic
C9O1doub1.21Å1.23Å
C9N5sing1.35Å1.33Å
N5C10sing1.47Å1.45Å
C10C11sing1.53Å1.52Å
C11C12sing1.53Å1.51Å
C12C13sing1.53Å1.53Å
O12C52doub1.21Å1.23Å
C13C14sing1.53Å1.53Å
C52N21sing1.35Å1.33Å
C52C16sing1.51Å1.53Å
C14C15sing1.51Å1.51Å
N6C15sing1.35Å1.33Å
N6C16sing1.47Å1.45Å
C15O13doub1.21Å1.23Å
C17C16sing1.53Å1.53Å
C17C18sing1.51Å1.50Å
C18O11doub1.21Å1.23Å
C4H1sing1.08Å1.08Å
C5H2sing1.09Å1.10Å
C6H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C11H5sing1.09Å1.10Å
C11H6sing1.09Å1.10Å
C12H7sing1.09Å1.10Å
C12H8sing1.09Å1.10Å
C14H9sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C16H11sing1.09Å1.10Å
C17H12sing1.09Å1.10Å
C17H13sing1.09Å1.10Å
C7H15sing1.09Å1.10Å
N2H16sing0.97Å1.00Å
N2H17sing0.97Å1.00Å
C10H18sing1.09Å1.10Å
C10H19sing1.09Å1.10Å
C13H20sing1.09Å1.10Å
C13H21sing1.09Å1.10Å
N5H22sing0.97Å1.00Å
O14H23sing0.97Å0.95Å
O15H24sing0.97Å0.95Å
C3H25sing1.08Å1.08Å
N6H26sing0.97Å1.00Å
N21H27sing0.97Å1.00Å
N21H28sing0.97Å1.00Å
C18O2sing1.34Å1.33Å
O2H14sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N1C3N128.8°122.5°
C3N1C110.8°120.6°
N1C3H25115.6°118.8°
C3NC2118.9°121.2°
NC3H25115.6°118.8°
N1CC1126.8°119.1°
N1CN3127.4°134.9°
O15C6C5110.2°110.5°
O15C6C7112.0°110.5°
O15C6H3112.2°110.5°
C6O15H24109.5°114.0°
NC2N2118.5°120.8°
NC2C1117.7°118.5°
C5C6C7100.7°104.1°
C6C5N3115.0°110.4°
C6C5O106.2°104.8°
C6C5H2107.8°110.4°
C5C6H3110.6°110.5°
C6C7O14113.1°110.5°
C6C7C8101.2°104.1°
C7C6H3110.7°110.5°
C6C7H15109.4°110.5°
C1CN3105.8°106.0°
CC1C2117.1°118.1°
CC1N4110.6°107.1°
CN3C5126.1°126.3°
CN3C4105.6°107.4°
N2C2C1123.7°120.7°
C2N2H16109.5°120.0°
C2N2H17109.4°120.0°
C2C1N4132.3°134.7°
O14C7C8112.9°110.5°
O14C7H15110.7°110.6°
C7O14H23109.5°114.0°
N3C5O109.9°110.4°
C5N3C4128.4°126.3°
N3C5H2108.6°110.3°
C5OC8110.0°105.3°
OC5H2109.2°110.3°
C1N4C4103.7°109.5°
C7C8O105.1°104.8°
C7C8C9111.1°110.4°
C7C8H4109.6°110.3°
C8C7H15109.2°110.5°
N3C4N4114.2°110.0°
N3C4H1122.9°125.0°
OC8C9109.8°110.4°
OC8H4111.1°110.4°
C8C9O1120.2°120.0°
C8C9N5117.1°120.0°
C9C8H4110.0°110.3°
N4C4H1122.9°125.0°
O1C9N5122.6°120.0°
C9N5C10121.2°120.0°
C9N5H22119.4°120.0°
N5C10C11113.0°109.5°
N5C10H18108.6°109.4°
N5C10H19108.6°109.4°
C10N5H22119.4°119.9°
C10C11C12112.0°109.5°
C10C11H5108.8°109.5°
C10C11H6108.8°109.5°
C11C10H18108.6°109.5°
C11C10H19108.6°109.5°
C11C12C13114.0°109.5°
C12C11H5108.8°109.5°
C12C11H6108.8°109.5°
C11C12H7108.3°109.4°
C11C12H8108.3°109.4°
C12C13C14112.0°109.5°
C13C12H7108.3°109.5°
C13C12H8108.3°109.5°
C12C13H20108.9°109.5°
C12C13H21108.8°109.5°
O12C52N21123.1°120.0°
O12C52C16119.9°120.0°
C13C14C15111.5°109.5°
C13C14H9109.0°109.5°
C13C14H10109.0°109.5°
C14C13H20108.8°109.5°
C14C13H21108.8°109.5°
N21C52C16117.0°120.0°
C52N21H27120.0°120.0°
C52N21H28120.0°120.0°
C52C16N6111.1°109.4°
C52C16C17111.7°109.5°
C52C16H11107.9°109.4°
C14C15N6115.9°120.0°
C14C15O13121.4°120.0°
C15C14H9109.0°109.5°
C15C14H10109.0°109.5°
C15N6C16122.7°120.0°
N6C15O13122.7°120.0°
C15N6H26118.6°120.0°
N6C16C17109.2°109.5°
N6C16H11108.9°109.5°
C16N6H26118.7°120.0°
C16C17C18116.8°109.5°
C17C16H11107.9°109.5°
C16C17H12107.6°109.4°
C16C17H13107.6°109.5°
C17C18O11121.5°120.0°
C18C17H12107.6°109.4°
C18C17H13107.6°109.5°
C17C18O2115.0°120.0°
O11C18O2123.5°120.1°
H5C11H6109.5°109.4°
H7C12H8109.5°109.5°
H9C14H10109.5°109.5°
H12C17H13109.5°109.5°
H16N2H17109.5°120.0°
H18C10H19109.5°109.5°
H20C13H21109.5°109.4°
H27N21H28120.1°120.0°
C18O2H14109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N1C3NH25180.0°180.0°
N1C3NC21.5°0.0°
C3N1CC10.3°0.0°
C3N1CN3179.5°179.9°
NC3N1C0.7°0.0°
C3NC2N2176.3°180.0°
C3NC2C11.3°0.0°
N1CC1N3179.9°179.9°
N1CC1C20.3°0.1°
N1CN3C51.4°0.0°
N1CC1N4179.7°180.0°
N1CN3C4179.6°180.0°
CN1C3H25179.3°180.0°
O15C6C5C7118.4°118.7°
O15C6C5H3124.6°122.7°
O15C6C7H3126.0°122.7°
O15C6C7O1443.7°0.0°
O15C6C5N3153.7°98.5°
O15C6C5O84.5°142.6°
O15C6C7C877.3°118.7°
O15C6C5H232.4°23.8°
O15C6C7H15167.5°122.7°
NC2C1C0.5°0.0°
NC2N2C1177.4°180.0°
NC2C1N4178.7°180.0°
NC2N2H160.0°180.0°
NC2N2H17120.0°0.0°
C2NC3H25178.5°180.0°
C5C6C7H3116.9°118.6°
C6C5N3C83.7°88.1°
C5C6C7O14160.8°118.7°
C6C5N3O119.8°115.4°
C6C5N3H2120.8°122.3°
C6C5OH2116.0°118.9°
C5C6C7C839.8°0.0°
C6C5N3C498.6°91.8°
C6C5OC813.5°40.5°
C5C6C7H1575.4°118.6°
C5C6O15H24180.0°179.9°
C6C7O14C8114.2°114.7°
C6C7O14H15123.1°122.7°
C7C6C5N387.9°142.8°
C7C6C5O33.9°23.9°
C6C7C8H15115.3°118.6°
C6C7C8O33.3°23.9°
C6C7C8C9152.0°142.8°
C7C6C5H2150.8°94.9°
C6C7C8H486.2°94.9°
C6C7O14H23180.0°180.0°
C7C6O15H2468.8°65.4°
CC1C2N2177.0°180.0°
CC1C2N4179.2°179.9°
C1CN3C5178.4°180.0°
C1CN3C40.3°0.1°
CC1N4C40.0°0.0°
N3CC1C2179.5°180.0°
CN3C5C4177.7°180.0°
CN3C5O156.6°156.5°
N3CC1N40.2°0.1°
CN3C4N40.3°0.0°
CN3C4H1179.7°180.0°
CN3C5H237.1°34.2°
N2C2C1N43.9°0.0°
C2N2H16H17120.0°180.0°
C2C1N4C4179.2°180.0°
C1C2N2H16177.4°0.0°
C1C2N2H1762.6°180.0°
O14C7C8H15123.5°122.7°
O14C7C8O154.5°142.6°
O14C7C8C986.8°98.5°
O14C7C6H382.3°122.7°
O14C7C8H435.0°23.7°
N3C5OH2119.0°122.3°
N3C5OC8111.5°159.3°
C5N3C4N4178.4°180.0°
C5N3C4H11.6°0.1°
N3C5C6H329.1°24.2°
C5OC8C712.6°40.5°
OC5N3C421.1°23.5°
C5OC8C9132.2°159.3°
OC5C6H3150.9°94.7°
C5OC8H4105.9°78.4°
C1N4C4N30.2°0.0°
C1N4C4H1179.8°179.9°
C7C8OC9119.6°118.9°
C7C8OH4118.5°118.8°
C7C8C9H4121.6°122.2°
C7C8C9O153.5°113.5°
C7C8C9N5129.1°66.5°
C8C7C6H3156.7°118.6°
C8C7O14H2365.9°65.3°
N3C4N4H1180.0°179.9°
C4N3C5H2140.5°145.8°
OC8C9H4122.5°122.4°
OC8C9O162.4°1.9°
OC8C9N5115.0°178.1°
C8OC5H2129.5°78.4°
OC8C7H1582.0°94.7°
C8C9O1N5177.3°180.0°
C8C9N5C10174.5°180.0°
C9C8C7H1536.7°24.2°
C8C9N5H225.5°0.0°
O1C9N5C108.1°0.0°
O1C9C8H4175.1°124.3°
O1C9N5H22171.9°180.0°
C9N5C10H22180.0°179.9°
C9N5C10C1182.0°180.0°
N5C9C8H47.5°55.7°
C9N5C10H18157.5°60.0°
C9N5C10H1938.5°60.0°
N5C10C11H18120.5°120.0°
N5C10C11H19120.5°120.0°
N5C10C11C12174.5°180.0°
N5C10C11H554.1°60.0°
N5C10C11H665.2°60.0°
N5C10H18H19118.4°120.0°
C10C11C12H5120.4°120.1°
C10C11C12H6120.4°120.0°
C10C11C12C13163.1°180.0°
C10C11H5H6118.8°120.0°
C10C11C12H742.4°60.0°
C10C11C12H876.3°60.0°
C11C10H18H19118.4°120.0°
C11C10N5H2298.0°0.0°
C11C12C13H7120.7°120.0°
C11C12C13H8120.7°120.0°
C11C12C13C14168.6°180.0°
C12C11H5H6118.8°120.0°
C11C12H7H8118.0°120.0°
C12C11C10H1865.0°60.0°
C12C11C10H1953.9°60.0°
C11C12C13H2048.3°60.0°
C11C12C13H2171.0°60.0°
C12C13C14H20120.4°120.0°
C12C13C14H21120.4°120.1°
C12C13C14C1558.0°180.0°
C13C12C11H576.5°59.9°
C13C12C11H642.7°60.0°
C13C12H7H8117.9°120.0°
C12C13C14H962.3°60.0°
C12C13C14H10178.3°60.0°
C12C13H20H21118.9°120.0°
O12C52N21C16178.0°179.9°
O12C52C16N639.6°0.1°
O12C52C16C1782.6°119.9°
O12C52C16H11159.0°120.0°
O12C52N21H270.0°180.0°
O12C52N21H28180.0°0.1°
C13C14C15H9120.3°120.0°
C13C14C15H10120.3°120.0°
C13C14C15N6108.3°180.0°
C13C14C15O1368.7°0.0°
C14C13C12H770.7°60.0°
C14C13C12H848.0°60.0°
C13C14H9H10119.1°120.0°
C14C13H20H21118.8°120.0°
N21C52C16N6138.4°180.0°
N21C52C16C1799.4°60.0°
N21C52C16H1119.1°60.1°
C52N21H27H28180.0°179.9°
C52C16N6C1566.9°85.0°
C52C16N6C17123.7°120.0°
C52C16N6H11118.7°119.9°
C52C16C17H11118.5°120.0°
C52C16C17C1869.0°175.0°
C52C16C17H1252.0°55.1°
C52C16C17H13170.0°64.9°
C52C16N6H26113.1°95.1°
C16C52N21H27178.0°0.1°
C16C52N21H282.0°180.0°
C14C15N6O13176.9°180.0°
C14C15N6C16175.6°179.9°
C15C14H9H10119.1°120.0°
C15C14C13H20178.4°60.0°
C15C14C13H2162.4°59.9°
C14C15N6H264.4°0.0°
C15N6C16H26180.0°179.9°
C15N6C16C17169.4°155.0°
N6C15C14H912.0°60.0°
N6C15C14H10131.4°60.0°
C15N6C16H1151.8°34.9°
C16N6C15O137.5°0.1°
N6C16C17H11118.2°120.0°
N6C16C17C18167.7°65.1°
N6C16C17H1271.3°175.0°
N6C16C17H1346.6°55.0°
O13C15C14H9171.0°120.0°
O13C15C14H1051.6°120.0°
O13C15N6H26172.6°180.0°
C16C17C18H12121.1°119.9°
C16C17C18H13121.1°120.1°
C16C17C18O1127.8°0.0°
C16C17H12H13116.7°120.0°
C17C16N6H2610.6°24.9°
C16C17C18O2152.8°180.0°
C17C18O11O2179.3°180.0°
C18C17C16H1149.5°55.0°
C18C17H12H13116.6°120.0°
C17C18O2H14179.3°180.0°
O11C18C17H12148.9°120.0°
O11C18C17H1393.3°120.0°
O11C18O2H140.0°0.0°
H2C5C6H392.1°146.5°
H3C6C7H1541.6°0.0°
H3C6O15H2456.3°57.3°
H4C8C7H15158.5°146.4°
H5C11C12H7162.8°60.1°
H5C11C12H844.1°179.9°
H5C11C10H18174.6°179.9°
H5C11C10H1966.4°60.0°
H6C11C12H778.0°180.0°
H6C11C12H8163.4°60.0°
H6C11C10H1855.3°59.9°
H6C11C10H19174.3°180.0°
H7C12C13H20168.9°180.0°
H7C12C13H2149.7°60.0°
H8C12C13H2072.4°59.9°
H8C12C13H21168.4°179.9°
H9C14C13H2058.1°60.0°
H9C14C13H21177.3°180.0°
H10C14C13H2061.3°180.0°
H10C14C13H2157.9°60.1°
H11C16C17H12170.5°64.9°
H11C16C17H1371.6°175.0°
H11C16N6H26128.2°145.0°
H12C17C18O231.8°60.1°
H13C17C18O286.1°60.0°
H15C7O14H2356.8°57.3°
H18C10N5H2222.5°120.0°
H19C10N5H22141.5°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon